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Author SHA1 Message Date
Maxim Cournoyer
952c8f805c
gnu: Add python-asttokens. 
* gnu/packages/python-xyz.scm (python-asttokens): New variable.
 2022-05-12 12:45:20 -04:00
Maxim Cournoyer
dc04cf5598
gnu: Add python-pure-eval. 
* gnu/packages/python-xyz.scm (python-pure-eval): New variable.
 2022-05-12 12:45:20 -04:00
Maxim Cournoyer
a116f7fdee
gnu: python-astroid: Propagate python-typing-extensions. 
* gnu/packages/python-xyz.scm (python-astroid)
[native-inputs]: Move python-typing-extensions to...
[propagated-inputs]: ... here.
[synopsis]: Shorten.
[description]: Normalize indentation.
 2022-05-12 12:45:19 -04:00
Maxim Cournoyer
df53689c51
gnu: python-ipython: Re-order fields. 
* gnu/packages/python-xyz.scm (python-ipython): Move the 'arguments' field
right after the 'build-system' one,  Re-indent 'inputs' field.
[propagated-inputs]: Sort inputs.
 2022-05-12 12:45:19 -04:00
Ricardo Wurmus
a1cb645d83
gnu: python-packaging-bootstrap: Add python2-variant property. 
* gnu/packages/python-build.scm (python-packaging-bootstrap)[properties]: Add
python2-variant.
(python2-packaging-bootstrap): Strip python2-variant property.
 2022-05-12 14:13:17 +02:00
Ricardo Wurmus
2936acfb37
gnu: python2-numpy: Update name. 
* gnu/packages/python-xyz.scm (python2-numpy)[name]: Rename to python2-numpy.
 2022-05-12 14:13:17 +02:00
Ricardo Wurmus
75ca0e5258
gnu: python2-setuptools: Patch source code. 
* gnu/packages/python-xyz.scm (python2-setuptools)[arguments]: Add phase
'compatibility-fixes.
 2022-05-12 14:13:14 +02:00
Ludovic Courtès
0b4300d4fd
gnu: commencement: Remove redundant import. 
Reported by Josselin Poiret on #guix.

* gnu/packages/commencement.scm: Remove redundant #:use-module (guix gexp).
 2022-05-12 12:29:38 +02:00
Philip McGrath
3547bb6a66
gnu: chez-scheme-for-system: Adjust for bytecode backend. 
Change 'chez-scheme-for-system' to return 'chez-scheme-for-racket' in
two cases when it previously returned 'chez-scheme':

 1. When 'chez-scheme' is not distributed with bootstrap bootfiles,
    since we can only cross-compile 'chez-scheme' for those systems; and

 2. When neither 'chez-scheme' nor 'chez-scheme-for-racket' supports
    native code generation, since we will be able to use the ``portable
    bytecode'' backends of 'chez-scheme-for-racket' as soon as the
    issues in <https://racket.discourse.group/t/950> are resolved.

* gnu/packages/chez.scm (chez-scheme-for-racket): Change condition.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-12 10:30:08 +02:00
Philip McGrath
4c0ac41ba4
gnu: chez-scheme-for-racket: Fix supported systems. 
This commit fixes the treatment of systems like "powerpc-w64-mingw32",
where the combination of architecture and kernel is not supported, even
though both are supported in other combinations. The build failure fixed
in b8fc916951 highlighted this problem:
see also <https://issues.guix.gnu.org/54292#6>. The correct support
status is specified by '%chez-features-table', which was added to
improve 'chez-upstream-features-for-system': this commit uses it to fix
the repair.

Once the issues in <https://racket.discourse.group/t/950> are resolved,
'chez-scheme-for-racket' and 'racket-vm-cs' will be able to run even on
systems for which native code generation is not supported. It's not
clear what behavior would be useful from 'nix-system->chez-machine':
since the current implementation is flawed and easy to misuse, we remove
it for now, replacing the remaining uses with
'racket-cs-native-supported-system?'.

* gnu/packages/chez.scm (nix-system->chez-machine): Remove it.
(racket-cs-native-supported-system?): New variable.
(chez-scheme-for-racket)[supported-systems]: Use it.
* gnu/packages/racket.scm (racket-vm-for-system): Likewise.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-12 10:30:08 +02:00
Philip McGrath
9322697636
gnu: chez-upstream-features-for-system: Improve implementation. 
This commit is a follow-up to b8fc916951.
While that commit fixed a breaking build, this one begins to address the
faulty assumptions that lead to the failure: see also
<https://issues.guix.gnu.org/54292#6>.

In this commit, we reimplement 'chez-upstream-features-for-system' using
the new '%chez-features-table', which explicitly specifies platform
support for both 'chez-scheme' and 'chez-scheme-for-racket', rather than
assuming a non-false result from 'nix-system->chez-machine' means that
the system is supported.

The remaining uses of 'nix-system->chez-machine' still make that
incorrect assumption and must be repaired in a future commit.

* gnu/packages/chez.scm (%nix-arch-to-chez-alist,
%nix-os-to-chez-alist): Replace with ...
(target-chez-arch, target-chez-os): ... these new variables.
(nix-system->chez-machine): Rewrite using them.
(%chez-features-table): New variable.
(chez-upstream-features-for-system): Rewrite using it.
(chez-scheme)[supported-systems]: Update armhf-linux comment.
(chez-scheme-bootstrap-bootfiles)[supported-systems]: Use
'chez-upstream-features-for-system'.
(chez-machine->nonthreaded, chez-machine->threaded,
chez-machine->nix-system): Remove unused functions.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-12 10:30:08 +02:00
Philip McGrath
9f88d8b72d
gnu: stex: Get machine type dynamically. 
* gnu/packages/chez.scm (stex)[arguments]: Run 'scheme' to determine
the machine type.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-12 10:30:08 +02:00
Philip McGrath
7ea79beda3
gnu: chez-scheme: Refactor configure phase and fix '--threads'. 
Move Chez-specific logic into '#:configure-flags' and a new
'configure-environment-variables' phase, leaving the 'configure' phase
as just a variant of the one from 'gnu-build-system' (including support
for '#:out-of-source?') that doesn't add implicit Autoconf-style flags.

In the process, do the right thing for "--threads", rather than assuming
the only nonthreaded platform is broken.

* gnu/packages/chez.scm (chez-scheme)[arguments]: Set configure flags in
'#:configure-flags' and separate 'configure-environment-variables' from
the residual 'configure' phase. More closely follow 'gnu-build-system'.
Use 'chez-upstream-features-for-system' for "--threads".
(chez-scheme-for-racket)[arguments]<#:configure-flags>: Add "--threads"
unconditionally.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-12 10:30:08 +02:00
Philip McGrath
d35920daf0
gnu: chez-scheme: Refactor documentation phases. 
Patches merged in both upstream Chez Scheme and Racket's variant will
soon let us replace the 'install-docs' phase with just
'make install-docs'.  Separating the 'link-doc-pdfs' phase (which won't
change) leaves us well-prepared for the transition, regardless of
whether Chez Scheme 9.5.10 or Racket 8.6 is released first.

* gnu/packages/chez.scm (chez-scheme)[arguments]: Split 'install-doc'
phase into 'install-docs' (matching the future 'make' target) and
'link-doc-pdfs'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-12 10:30:08 +02:00
Philip McGrath
e9ac2a8f4b
gnu: chez-scheme: Update to 9.5.8. 
* gnu/packages/chez.scm (chez-scheme): Update to 9.5.8.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-12 10:30:08 +02:00
Philip McGrath
544fbdcc9e
gnu: racket: Fix out-of-source build. 
* gnu/packages/racket.scm (racket-vm-cgc)[arguments]: Supply
'#:out-of-source? #t'. Wrap 'install-license-files' to work around
limitation.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-12 10:30:07 +02:00
Philip McGrath
af375c6394
gnu: racket: Update to 8.5. 
* gnu/packages/patches/racket-gui-tethered-launcher-backport.patch,
gnu/packages/patches/racket-enable-scheme-backport.patch: Delete files.
* gnu/local.mk (dist_patch_DATA): Remove them.
* gnu/packages/chez.scm (chez-scheme-for-racket): Update to 9.5.7.6.
* gnu/packages/racket.scm (%racket-version): Update to 8.5.
(%racket-origin)[patches]: Remove obsolete patches.
(racket-vm-common-configure-flags): Correct comment.
(racket)[inputs]<2d, datalog, deinprogramm, draw, drracket, expeditor,
htdp, pict, plot, quickscript, racklog, rackunit, redex, scribble,
typed-racket, string-constants, syntax-color, web-server, xrepl>: Update
checksums.
<gui, srfi>: Likewise, and remove obsolete backports.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-12 10:30:07 +02:00
Arun Isaac
8980f6c532
gnu: quark: Use G-expressions. 
* gnu/packages/web.scm (quark)[arguments]: Rewrite using G-expressions.
 2022-05-12 13:29:57 +05:30
Arun Isaac
a1a55e5b60
gnu: fastahack: Wrap long line. 
* gnu/packages/bioinformatics.scm (fastahack): Wrap long line.
 2022-05-12 12:59:18 +05:30
Efraim Flashner
2e0d02ebe3
gnu: agda.scm: Add missing import. 
* gnu/packages/agda.scm: Also use (guix gexp).
 2022-05-12 08:42:09 +03:00
Leo Famulari
b33ebc22fb
gnu: linux-libre 5.4: Update to 5.4.192. 
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.192.
(linux-libre-5.4-pristine-source, deblob-scripts-5.4): Update hashes.
 2022-05-11 20:29:49 -04:00
Leo Famulari
2d7264721e
gnu: linux-libre 5.10: Update to 5.10.114. 
* gnu/packages/linux.scm (linux-libre-5.10-version): Update to 5.10.114.
(linux-libre-5.10-pristine-source, deblob-scripts-5.10): Update hashes.
 2022-05-11 20:29:49 -04:00
Leo Famulari
f8057fdb7e
gnu: linux-libre 5.15: Update to 5.15.38. 
* gnu/packages/linux.scm (linux-libre-5.15-version): Update to 5.15.38.
(linux-libre-5.15-pristine-source, deblob-scripts-5.15): Update hashes.
 2022-05-11 20:29:49 -04:00
Leo Famulari
96795f6be3
gnu: linux-libre: Update to 5.17.6. 
* gnu/packages/linux.scm (linux-libre-5.17-version): Update to 5.17.6.
(linux-libre-5.17-pristine-source, deblob-scripts-5.17): Update hashes.
 2022-05-11 20:29:45 -04:00
Tobias Geerinckx-Rice
f04dceac72
gnu: beep: Drop obsolete $(pkgdocdir) make flag. 
* gnu/packages/terminals.scm (beep)[arguments]: Remove "pkgdocdir="
from #:make-flags.
 2022-05-08 02:00:40 +02:00
Tobias Geerinckx-Rice
e6c3e7d741
gnu: beep: Use G-expressions. 
* gnu/packages/terminals.scm (beep)[arguments]:
Rewrite as G-expressions.
 2022-05-08 02:00:40 +02:00
Tobias Geerinckx-Rice
de15ca7af8
gnu: beep: Update to 1.4.12. 
* gnu/packages/terminals.scm (beep): Update to 1.4.12.
[arguments]: Set $(CC) #:make-flag.
Manually substitute the correct value of make check's $(PWD). (!)
 2022-05-08 02:00:40 +02:00
Tobias Geerinckx-Rice
cd00881d72
gnu: lighttpd: Update style. 
* gnu/packages/web.scm (lighttpd)[arguments]:
Rewrite as G-expressions.  Don't explicitly return #t from phases.
[inputs]: Remove input labels.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
fd7130e4b5
gnu: lighttpd: Update to 1.4.64. 
* gnu/packages/web.scm (lighttpd): Update to 1.4.64.
[arguments]: Add a new 'skip-failing-tests phase.
[inputs]: Substitute pcre2 for pcre & pcre:bin.
 2022-05-08 02:00:01 +02:00
Tobias Geerinckx-Rice
faf715b1dc
gnu: lighttpd: Fix bash reference. 
* gnu/packages/web.scm (lighttpd)[arguments]:
Substitute SEARCH-INPUT-FILE for WHICH.
[inputs]: Add bash-minimal.

f fix lighttpd xcc
 2022-05-08 02:00:01 +02:00
Tobias Geerinckx-Rice
20fbd87093
gnu: recutils: Fix cross-compilation. 
* gnu/packages/databases.scm (recutils)
[arguments]: Point "--with-bash-headers" to the root bash
"/include" directory.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
b4c9a3d23b
gnu: recutils: Remove some input labels. 
* gnu/packages/databases.scm (recutils)[inputs]:
Remove input labels.
[arguments]: Adjust accordingly.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
5ed3fca18c
gnu: iceauth: Update to 1.0.9. 
* gnu/packages/xorg.scm (iceauth): Update to 1.0.9.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
914d2c2142
gnu: agda: Use G-expressions. 
* gnu/packages/agda.scm (agda)[arguments]:
Rewrite as G-expressions.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
2c67e1cfbf
gnu: agda: Update to 2.6.2.2. 
* gnu/packages/agda.scm (agda): Update to 2.6.2.2.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
388e039044
gnu: isc-dhcp: Update to 4.4.3. 
* gnu/packages/admin.scm (isc-dhcp): Update to 4.4.3.
[source]: Remove upstreamed patch.
* gnu/packages/patches/isc-dhcp-gcc-compat.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2022-05-08 02:00:00 +02:00
Ludovic Courtès
d355381062
gnu: python-pygit2: Update to 1.9.1. 
* gnu/packages/python-xyz.scm (python-pygit2): Update to 1.9.1.
[propagated-inputs]: Change LIBGIT2-1.3 to LIBGIT2.
 2022-05-11 23:50:27 +02:00
Ludovic Courtès
e764b89a52
gnu: libgit2: Update to 1.4.3. 
* gnu/packages/version-control.scm (libgit2): Update to 1.4.3.
[source]: Adjust snippet to comment out the "10 years ago" test, which
was changed in 1.4.3 but is still problematic.
[arguments]: Add "-DUSE_SSH=ON".  Remove 'fix-hardcoded-paths' phase.
Adjust 'check' phase for new executable name.
(libgit2-1.3): New variable.
(libgit2-1.1): Inherit from 'libgit2-1.3'; inherit from its origin too.
* gnu/packages/crates-io.scm (rust-git2-0.13)[inputs]: Use LIBGIT2-1.3.
* gnu/packages/python-xyz.scm (python-pygit2)[propagated-inputs]: Likewise.

Co-authored-by: Maxime Devos <maximedevos@telenet.be>
 2022-05-11 23:50:26 +02:00
Tobias Geerinckx-Rice
d24ad39491
gnu: nq: Use G-expressions. 
* gnu/packages/admin.scm (nq)[arguments]:
Rewrite as G-expressions.
 2022-05-08 02:00:01 +02:00
Tobias Geerinckx-Rice
4051231d20
gnu: nq: Update to 0.5. 
* gnu/packages/admin.scm (nq): Update to 0.5.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
09e885d848
gnu: netcat-openbsd: Update to 1.218-5. 
* gnu/packages/admin.scm (netcat-openbsd): Update to 1.218-5.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
85d56c1780
gnu: inxi-minimal: Update to 3.3.15-1. 
* gnu/packages/admin.scm (inxi-minimal): Update to 3.3.15-1.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
8de6d6ffb2
gnu: htop: Update to 3.2.0. 
* gnu/packages/admin.scm (htop): Update to 3.2.0.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
6f4ceb5449
gnu: libscrypt: Use G-expressions. 
* gnu/packages/crypto.scm (libscrypt)[arguments]:
Rewrite as G-expressions.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
601d95206d
gnu: libscrypt: Update to 1.22. 
* gnu/packages/crypto.scm (libscrypt): Update to 1.22.
 2022-05-08 02:00:00 +02:00
Lars-Dominik Braun
dc00098535
gnu: mergerfs: Update to 2.33.5. 
* gnu/packages/file-systems.scm (mergerfs): Update to 2.33.5.
 2022-05-11 12:31:14 +02:00
Efraim Flashner
427dbce3a8
gnu: rust-rand-distr-0.4: Move code changes to snippet. 
* gnu/packages/crates-io.scm (rust-rand-distr-0.4)[arguments]: Move code
relaxing version requirements ...
[source]: ... to a snippet.
 2022-05-11 11:29:37 +03:00
Efraim Flashner
d47b7bbfc8
gnu: rust-nalgebra-macros-0.1: Move code changes to snippet. 
* gnu/packages/crates-io.scm (rust-nalgebra-macros-0.1)[arguments]: Move
code relaxing version requirements ...
[source]: ... to a snippet.
 2022-05-11 11:28:21 +03:00
Efraim Flashner
9dd784bace
gnu: rust-nalgebra-0.26: Move code changes to snippet. 
* gnu/packages/crates-io.scm (rust-nalgebra-0.26)[arguments]: Move code
relaxing version requirements ...
[source]: ... to a snippet.
(rust-nalgebra-macros-0.1, rust-statrs-0.14)[arguments]: Adjust
accordingly.
 2022-05-11 11:18:51 +03:00
Efraim Flashner
408d78d3ef
gnu: rust-average-0.13: Move code changes to snippet. 
* gnu/packages/crates-io.scm (rust-average-0.13)[arguments]: Move code
relaxing version requirements ...
[source]: ... to a snippet.
(rust-nalgebra-0.26, rust-nalgebra-macros-0.1, rust-rand-distr-0.4,
rust-statrs-0.14)[arguments]: Adjust accordingly.
 2022-05-11 11:11:12 +03:00
Efraim Flashner
210bc02c50
gnu: rust-pyo3-0.15: Adjust version dependency relaxing code. 
* gnu/packages/crates-io.scm (rust-pyo3-0.15)[source]: Adjust snippet to
require at least the desired version, not an exact version.
 2022-05-11 10:45:46 +03:00
Efraim Flashner
f0ce201f49
gnu: rust-proc-macro-error-1: Move code changes to snippet. 
* gnu/packages/crates-io.scm (rust-proc-macro-error-1)[arguments]: Move
code relaxing version requirements from custom phase ...
[source]: ... to a snippet.
 2022-05-11 10:03:36 +03:00
Efraim Flashner
ef1d3d44d0
gnu: rust-parking-lot-core-0.8: Move code changes to snippet. 
This allows the changes to propagate through the cargo-build-system.

* gnu/packages/crates-io.scm (rust-parking-lot-core-0.8)[source]: Add
snippet to relax version dependencies.
[arguments]: Remove 'relax-dependencies phase.
 2022-05-11 09:49:55 +03:00
Arun Isaac
aaa981f7c5
gnu: cwltool: Do not propagate inputs. 
* gnu/packages/bioinformatics.scm (cwltool)[propagated-inputs]: Move to ...
[inputs]: ... here.
 2022-05-11 10:52:45 +05:30
Stephen Paul Weber
57baf246e8
gnu: Add ruby-money-open-exchange-rates. 
* gnu/packages/ruby.scm (ruby-money-open-exchange-rates): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 22:15:14 -04:00
Stephen Paul Weber
b9365c163d
gnu: Add ruby-monetize. 
* gnu/packages/ruby.scm (ruby-monetize): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 22:15:14 -04:00
Ludovic Courtès
dba78c32a7
gnu: python-cryptography: Bump 'rust-redox-syscall' dependency. 
Fixes a build failure.

* gnu/packages/python-crypto.scm (python-cryptography): Replace
'rust-redox-syscall-0.1' with 'rust-redox-syscall-0.2'.
 2022-05-11 00:50:51 +02:00
Ludovic Courtès
427afa6501
gnu: rust-parking-lot-core@0.8: Fix compilation. 
Fixes a build failure introduced in
d16298196c.

This is a followup to 25c66d69b2.

* gnu/packages/crates-io.scm (rust-parking-lot-core-0.8): Add
'relax-dependencies' phase.
 2022-05-11 00:50:41 +02:00
Stephen Paul Weber
9d795fb8fd
gnu: Add ruby-money. 
* gnu/packages/ruby.scm (ruby-money): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 11:05:03 -04:00
Stephen Paul Weber
dda07b2cbc
gnu: Add ruby-dhall. 
* gnu/packages/ruby.scm (ruby-dhall): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 11:05:03 -04:00
Tobias Geerinckx-Rice
9a867c26b0
gnu: parted: Use G-expressions & new input style. 
* gnu/packages/disk.scm (parted)
[arguments]: Rewrite as G-expressions.
[native-inputs]: Remove input labels.
 2022-05-08 02:00:01 +02:00
Tobias Geerinckx-Rice
d798e5b6c1
gnu: parted: Update to 3.5. 
* gnu/packages/disk.scm (parted): Update to 3.5.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
a2a97b10ca
gnu: font-adobe-source-sans-pro: Update to 3.046R. 
* gnu/packages/fonts.scm (font-adobe-source-sans-pro): Update to 3.046R.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
b6b504d64f
gnu: dovecot-pigeonhole: Update to 0.5.19. 
* gnu/packages/mail.scm (dovecot-pigeonhole): Update to 0.5.19.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
605b1f7764
gnu: dovecot: Update to 2.3.19. 
* gnu/packages/mail.scm (dovecot): Update to 2.3.19.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
1115428bbb
gnu: recutils: Omit static libraries. 
* gnu/packages/databases.scm (recutils)[arguments]:
Add "--disable-static" to #:configure-flags.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
38028fdf95
gnu: recutils: Update to 1.9. 
* gnu/packages/databases.scm (recutils): Update to 1.9.
 2022-05-08 02:00:00 +02:00
Tobias Geerinckx-Rice
9d349c01d8
gnu: memcached: Update to 1.6.15. 
* gnu/packages/databases.scm (memcached): Update to 1.6.15.
 2022-05-08 02:00:00 +02:00
Stephen Paul Weber
0f70547212
gnu: Add ruby-base32. 
* gnu/packages/ruby.scm (ruby-base32): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 09:56:11 -04:00
Stephen Paul Weber
9b21f4b669
gnu: Add ruby-gem-release. 
* gnu/packages/ruby.scm (ruby-gem-release): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 09:56:11 -04:00
Stephen Paul Weber
7455ed8e52
gnu: Add ruby-cbor. 
* gnu/packages/ruby.scm (ruby-cbor): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 09:56:10 -04:00
Stephen Paul Weber
956ca540dc
gnu: Add ruby-citrus. 
* gnu/packages/ruby.scm (ruby-citrus): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 09:56:10 -04:00
Efraim Flashner
000a620d17
gnu: rust-parking-lot-0.11: Fix dependencies. 
This is a follow-up to f02f8db381.

* gnu/packages/crates-io.scm (rust-parking-lot-0.11)[arguments]: In
cargo-development-inputs replace rust-rand-0.7 with 0.8.
 2022-05-10 15:34:48 +03:00
Efraim Flashner
25c66d69b2
gnu: rust-parking-lot-core-0.8: Fix dependencies. 
This is a follow-up to d16298196c.

* gnu/packages/crates-io.scm (rust-parking-lot-core-0.8)[arguments]: In
cargo-inputs replace rust-cfg-if-0.1 with 1, rust-redox-syscall-0.1 with
0.2, rust-thread-id-3 with 4. Remove rust-cloudabi-0.1.
 2022-05-10 15:34:47 +03:00
Efraim Flashner
2d8daae3bd
gnu: Add rust-thread-id-4. 
* gnu/packages/crates-io.scm (rust-thread-id-4): New variable.
(rust-thread-id-3): Inherit from rust-thread-id-4.
 2022-05-10 15:34:47 +03:00
Stephen Paul Weber
dde2e36394
gnu: Add ruby-lazy-object. 
* gnu/packages/ruby.scm (ruby-lazy-object): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 08:05:22 -04:00
Stephen Paul Weber
ad2f8ee1b2
gnu: Add ruby-multihashes. 
* gnu/packages/ruby.scm (ruby-multihashes): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 07:47:33 -04:00
Stephen Paul Weber
1cb87949d9
gnu: Add ruby-multicodecs. 
* gnu/packages/ruby.scm (ruby-multicodecs): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 07:47:32 -04:00
Stephen Paul Weber
0ed219bb33
gnu: Add ruby-promise. 
* gnu/packages/ruby.scm (ruby-promise): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 07:47:32 -04:00
Efraim Flashner
0573e59626
gnu: ncdu: Update to 1.17. 
* gnu/packages/ncdu.scm (ncdu): Update to 1.17.
 2022-05-10 14:01:44 +03:00
Stephen Paul Weber
22b9ac3f76
gnu: Add ruby-value-semantics. 
* gnu/packages/ruby.scm (ruby-value-semantics): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 06:39:55 -04:00
Stephen Paul Weber
3ee6cb8d54
gnu: Add ruby-countdownlatch. 
* gnu/packages/ruby.scm (ruby-countdownlatch): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 06:20:54 -04:00
Stephen Paul Weber
c37d14fbea
gnu: Add ruby-sucker-punch 
* gnu/packages/ruby.scm (ruby-sucker-punch): New variable.

Signed-off-by: Raghav Gururajan <rg@raghavgururajan.name>
 2022-05-10 05:38:48 -04:00
Efraim Flashner
d775a24344
gnu: openjdk12: Fix build. 
* gnu/packages/java.scm (openjdk12)[arguments]: Override inherited
'fix-java-shebangs phase.
 2022-05-10 11:13:45 +03:00
Efraim Flashner
37e44d48ba
gnu: parallel: Update to 20220422. 
* gnu/packages/parallel.scm (parallel): Update to 20220422.
 2022-05-09 23:41:50 +03:00
Efraim Flashner
f7da6b0be5
gnu: mupdf: Use G-expressions. 
* gnu/packages/pdf.scm (mupdf)[source, arguments]: Rewrite using
G-expressions.
 2022-05-09 23:31:38 +03:00
Efraim Flashner
489dba600b
gnu: mupdf: Remove input labels. 
* gnu/packages/pdf.scm (mupdf)[inputs]: Remove input labels.
 2022-05-09 23:30:02 +03:00
Efraim Flashner
c438809bc4
gnu: mupdf: Update to 1.19.1. 
* gnu/packages/pdf.scm (mupdf): Update to 1.19.1.
[source]: Remove trailing #t.
 2022-05-09 23:30:02 +03:00
Efraim Flashner
05d4f2435b
gnu: mujs: Use G-expressions. 
* gnu/packages/javascript.scm (mujs)[arguments]: Rewrite using
G-expressions.
 2022-05-09 23:30:02 +03:00
Efraim Flashner
0ec70c2c79
gnu: mujs: Update to 1.2.0. 
* gnu/packages/javascript.scm (mujs): Update to 1.2.0.
[source]: Add snippet to remove generated files.
 2022-05-09 23:30:01 +03:00
Efraim Flashner
a2130bcf09
gnu: git-annex: Update inputs. 
* gnu/packages/haskell-apps.scm (git-annex)[inputs]: Add
ghc-ansi-terminal, ghc-attoparsec, ghc-conduit, ghc-connection,
ghc-http-client-tls, ghc-microlens, ghc-network-bsd, ghc-network-uri,
ghc-transformers, ghc-unliftio-core, ghc-vector. Remove ghc-esqueleto,
ghc-hslogger.
 2022-05-09 22:00:32 +03:00
Arun Isaac
1a23c0a0c7
gnu: mumi: Use guile-json-4 instead of guile-json-3. 
* gnu/packages/mail.scm (mumi)[inputs]: Replace guile-json-3 with
guile-json-4.
 2022-05-09 23:25:21 +05:30
Andrew Tropin
1ebc27475c
gnu: emacs-modus-themes: Update to 2.3.3. 
[[PGP Signed Part:No public key for 2208D20958C1DEB0 created at 2022-05-05T09:12:05+0200 using RSA]]

* gnu/packages/emacs-xyz.scm (emacs-modus-themes): Update to 2.3.3.
* gnu/packages/emacs-xyz.scm (emacs-modus-themes)[source]: Change repository.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 16:00:28 +02:00
Ludovic Courtès
6b974845c7
gnu: rust-instant: Fix dependencies. 
Fixes a build failure introduced in
bec6bf64bc.

* gnu/packages/crates-io.scm (rust-instant-0.1)[arguments]: Adjust
inputs as per "guix import crate rust@0.1.9".
 2022-05-09 15:59:02 +02:00
Danny Milosavljevic
271b2e43be
gnu: openjdk: Update to 11.0.15. 
* gnu/packages/java (openjdk): Update to 11.0.15.
[arguments]<#:phases>[fix-java-shebangs]: Adapt phase.
 2022-05-09 12:40:54 +02:00
Felix Gruber
4980630d1e
gnu: python-numpy-next: Update to 1.22.3. 
* gnu/packages/python-xyz.scm (python-numpy-next): Update to 1.22.3.
[native-inputs]: Replace python-hypothesis with python-hypothesis-6.23.
* gnu/packages/python-xyz.scm (python-numpy-1.20)[native-inputs]:
Explicitly set native-inputs to prevent it to inherit the modified
native-inputs from python-numpy-next, which would result in > 2000
package rebuilds.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 12:26:46 +02:00
Attila Lendvai
b69fc147d7
gnu: Add xkblayout. 
* gnu/packages/xdisorg.scm (xkblayout): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 12:26:46 +02:00
Greg Hogan
998eda3067
gnu: LLVM, Clang: Update to 14.0.3. 
* gnu/packages/llvm.scm (%llvm-monorepo-hashes, %llvm-patches, llvm-14,
  lld-14): Update to 14.0.3.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 12:26:46 +02:00
Peter Polidoro
fda20f14f0
gnu: kicad: Update to 6.0.5. 
* gnu/packages/engineering.scm (kicad): Update to 6.0.5.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 12:26:45 +02:00
Ludovic Courtès
bb8c5f5205
gnu: valgrind: Remove input labels. 
* gnu/packages/valgrind.scm (valgrind/interactive)[inputs]: Remove labels.
[arguments]: Adjust accordingly.
 2022-05-09 12:26:45 +02:00
Denis 'GNUtoo' Carikli
4d1a88312c
gnu: valgrind: Allow ld.so symbols to be found. 
Fixes <https://issues.guix.gnu.org/54728>.

* gnu/packages/valgrind.scm (valgrind/interactive)[native-inputs]:
Add libc:debug
[arguments]: Add patch-default-debuginfo-path phase
[source]: Add patch.
(valgrind-3.18)[source]: Inherit from (package-source valgrind/interactive)
and remove 'patches' field.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 12:26:45 +02:00
Denis 'GNUtoo' Carikli
fcf0949c7d
gnu: valgrind: Sort imports alphabetically. 
* gnu/packages/valgrind.scm: Sort imports alphabetically.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 12:26:45 +02:00
Ludovic Courtès
4668454f64
gnu: libgit@1.1: Patch time-dependent unit test. 
This is a followup to e48b5484af.

* gnu/packages/version-control.scm (libgit2-1.1)[source]: Add
"revparse.c" snippet.
 2022-05-09 12:26:44 +02:00
Adam Kandur
9f9c2f200b
gnu: Add cl-zip. 
* gnu/packages/lisp-xyz.scm (sbcl-zip, cl-zip, ecl-zip): New variables.

Signed-off-by: Guillaume Le Vaillant <glv@posteo.net>
 2022-05-09 11:14:29 +02:00
Arun Isaac
8d25887d87
gnu: vcflib: Set absolute path to pkg-config. 
Setting the absolute path to pkg-config is required to support
cross-compilation.

* gnu/packages/bioinformatics.scm (vcflib)[arguments]: Set
PKG_CONFIG_EXECUTABLE in #:configure-flags.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2022-05-09 11:19:43 +03:00
Arun Isaac
9047a31152
gnu: vcflib: Find submodule sources in native-inputs during cross-compilation. 
* gnu/packages/bioinformatics.scm (vcflib)[arguments]: In the
unpack-submodule-sources phase, look for submodule sources in both inputs and
native-inputs.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2022-05-09 11:19:39 +03:00
Arun Isaac
9a68c07507
gnu: vcflib: Use G-expressions. 
* gnu/packages/bioinformatics.scm (vcflib)[source, arguments]: Rewrite using
G-expressions.
[arguments]: Do not return #t from custom phases.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2022-05-09 11:19:03 +03:00
Arun Isaac
9258576eea
gnu: fastahack: Use compiler specific to the build target. 
* gnu/packages/bioinformatics.scm (fastahack)[arguments]: Set CXX in
#:make-flags. In the build-dynamic phase, use cxx-for-target instead of g++.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2022-05-09 11:18:09 +03:00
Arun Isaac
713dadf47e
gnu: fastahack: Use G-expressions. 
* gnu/packages/bioinformatics.scm (fastahack)[arguments]: Rewrite
using G-expressions. Do not return #t from custom phases.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2022-05-09 11:17:51 +03:00
Arun Isaac
086c7c143c
gnu: tabixpp: Fix cross-compilation. 
tabixpp links to libbz2 from bzip2 and liblzma from xz. Therefore, bzip2 and
xz should be listed in inputs even though they are already present implicitly
in native-inputs. Else, cross-compilation will fail.

* gnu/packages/bioinformatics.scm (tabixpp)[inputs]: Add bzip2 and xz.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2022-05-09 11:17:25 +03:00
Arun Isaac
cbda00c499
gnu: tabixpp: Use build tools specific to the target. 
* gnu/packages/bioinformatics.scm (tabixpp)[arguments]: Set CC and CXX in
#:make-flags. In the build-libraries phase, use cxx-for-target instead of g++
and ar-for-target instead of ar.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2022-05-09 11:15:12 +03:00
Arun Isaac
a990547952
gnu: tabixpp: Use #:make-flags. 
* gnu/packages/bioinformatics.scm (tabixpp)[arguments]: Do not override the
build phase. Move the required make arguments to #:make-flags. Add
build-libraries phase.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2022-05-09 11:14:18 +03:00
Arun Isaac
ff1fd3b012
gnu: tabixpp: Use G-expressions. 
* gnu/packages/bioinformatics.scm (tabixpp)[source]: Reindent.
[arguments]: Use search-input-file and search-input-directory.
[source, arguments]: Rewrite using G-expressions. Do not return #t from
snippets and custom phases.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2022-05-09 11:13:40 +03:00
Greg Hogan
9017c2406b
gnu: gcc-11: Update to 11.3.0. 
* gnu/packages/gcc.scm (gcc-11): Update to 11.3.0.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2022-05-09 11:02:14 +03:00
Kyle Meyer
57a88a2cfe
gnu: git-annex: Update to 10.20220504. 
* gnu/packages/haskell-apps.scm (git-annex): Update to 10.20220504.

Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
 2022-05-09 11:02:11 +03:00
John Kehayias
7bacea65ac
gnu: mangohud: Update to 0.6.7. 
* gnu/packages/graphics.scm (mangohud): Update to 0.6.7.
[phases]{patch-paths}: Remove loader_libdrm.cpp path patch as the file has
been removed.
[inputs]: Remove libdrm input, no longer needed.

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2022-05-09 09:58:25 +02:00
jgart
09e720309e
gnu: Add python-style. 
* gnu/packages/python-xyz.scm (python-style): New variable.

Co-authored-by: Yuchen Pei <hi@ypei.me>
Co-authored-by: donotshake <dns@0cool.club>
Co-authored-by: Vagrant Cascadian <vagrant@debian.org>
Co-authored-by: Pranav Vats <pranavats@disroot.org>

Signed-off-by: Mathieu Othacehe <othacehe@gnu.org>
 2022-05-09 09:35:29 +02:00
Jai Vetrivelan
cbaad2f568
gnu: emacs-modus-themes: Update to 2.3.2. 
* gnu/packages/emacs-xyz.scm (emacs-modus-themes): Update to 2.3.2.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:34 +02:00
Jai Vetrivelan
d51f764629
gnu: Add emacs-pulsar. 
* gnu/packages/emacs-xyz.scm (emacs-pulsar): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:34 +02:00
Jai Vetrivelan
9b30bc1da3
gnu: Add emacs-lin. 
* gnu/packages/emacs-xyz.scm (emacs-lin): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:33 +02:00
Jai Vetrivelan
1140dcda5c
gnu: Add emacs-logos. 
* gnu/packages/emacs-xyz.scm (emacs-logos): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:33 +02:00
Jai Vetrivelan
f9157b736b
gnu: emacs-mct: Add Info manual. 
* gnu/packages/emacs-xyz.scm (emacs-mct): Add Info manual.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:33 +02:00
Jai Vetrivelan
cb9db2b0ea
gnu: Add emacs-flymake-proselint. 
* gnu/packages/emacs-xyz.scm (emacs-flymake-proselint): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:33 +02:00
Jai Vetrivelan
4f3fd912a7
gnu: Add python-proselint. 
* gnu/packages/python-xyz.scm (python-proselint): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:33 +02:00
Jai Vetrivelan
1439bc9dbb
gnu: Add python-click-8. 
* gnu/packages/python-xyz.scm (python-click-8): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:33 +02:00
jgart
2d908f9d56
gnu: emacs-helm-org-contacts: Update to 20201202. 
* gnu/packages/emacs-xyz.scm (emacs-helm-org-contacts): Update to 20201202.
[version]: Use new revision variable in let block.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:32 +02:00
Charles
594c38da35
gnu: gnome-shell-extension-blur-my-shell: Update to 29. 
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-blur-my-shell):
Update to 29.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:32 +02:00
Charles
f374a4a1e5
gnu: gnome-shell-extension-burn-my-windows: Update to 15. 
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-burn-my-windows): Update
to 15.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:32 +02:00
Paul A. Patience
522c842a1c
gnu: font-iosevka: Update to 15.2.0. 
* gnu/packages/fonts.scm (font-iosevka): Update to 15.2.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:32 +02:00
Maximilian Heisinger
aa6bbbb1ea
gnu: Add ruby-asciidoctor-multipage. 
* gnu/packages/ruby.scm (ruby-asciidoctor-multipage): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:32 +02:00
Ludovic Courtès
4b13273d3a
gnu: lf: Remove input labels. 
* gnu/packages/disk.scm (lf)[native-inputs]: Remove input labels.
 2022-05-09 00:07:32 +02:00
Chadwain Holness
bbdd8c35e8
gnu: lf: Update to 27 
* gnu/packages/disk.scm (lf): Update to 27.
[native-inputs]: Remove go-github.com-nsf-termbox-go.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:32 +02:00
kiasoc5
8b1e46cb3e
gnu: cool-retro-term: Lint package definition. 
* gnu/packages/terminals.scm [inputs]: Add bash-minimal.
[source]: Remove trailing #t.
[arguments]: Remove trailing #t from phases.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:31 +02:00
kiasoc5
c1f60c5c34
gnu: cool-retro-term: Upgrade to 1.2.0. 
* gnu/packages/terminals.scm (cool-retro-term): Upgrade to 1.2.0.
[source]: Use commit as version.
[inputs]: Use qtquickcontrols2 instead of qtquickcontrols.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:31 +02:00
Niklas Eklund
51bbcc91b4
gnu: emacs-git-email: Fixes build of package. 
* gnu/packages/patches/emacs-git-email-missing-parens.patch: New file.
* gnu/packages/emacs-xyz.scm (emacs-git-email)[source]: Use it.
* gnu/local.mk (dist_patch_DATA): Add it.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-09 00:07:31 +02:00
Ludovic Courtès
e48b5484af
gnu: libgit2: Work around time-dependent unit test. 
Fixes <https://issues.guix.gnu.org/55326>.

* gnu/packages/version-control.scm (libgit2)[source]: Augment 'snippet'
to modify "tests/refs/revparse.c".
 2022-05-09 00:07:31 +02:00
Ludovic Courtès
f226e051f5
gnu: byacc: Update to 20220128. 
* gnu/packages/c.scm (byacc): Update to 20220128.
 2022-05-09 00:07:31 +02:00
Tobias Geerinckx-Rice
3d84a72966
gnu: fio: Use G-expressions. 
* gnu/packages/benchmark.scm (fio)[arguments]:
Rewrite as G-expressions.
 2022-05-01 02:00:08 +02:00
Tobias Geerinckx-Rice
140d4f2101
gnu: fio: Update to 3.30. 
* gnu/packages/benchmark.scm (fio): Update to 3.30.
 2022-05-01 02:00:08 +02:00
Tobias Geerinckx-Rice
644a966772
gnu: libcap-ng: Omit static libraries. 
* gnu/packages/admin.scm (libcap-ng)[arguments]: Add "--disable-static"
to #:configure-flags.
 2022-05-01 02:00:08 +02:00
Tobias Geerinckx-Rice
ef2a240100
gnu: libcap-ng: Update to 0.8.3. 
* gnu/packages/admin.scm (libcap-ng): Update to 0.8.3.
 2022-05-01 02:00:07 +02:00
Tobias Geerinckx-Rice
a9c295c4af
gnu: carla: Prepare for cross-compilation. 
* gnu/packages/audio.scm (carla)[arguments]: Use CC-FOR-TARGET.
 2022-05-01 02:00:07 +02:00
Tobias Geerinckx-Rice
acfc0feae4
gnu: carla: Use G-expressions. 
* gnu/packages/audio.scm (carla)[arguments]:
Rewrite as G-expressions.
 2022-05-01 02:00:07 +02:00
Tobias Geerinckx-Rice
eb1eac4762
gnu: carla: Remove input labels. 
* gnu/packages/audio.scm (carla)[inputs]:
Remove input labels.
 2022-05-01 02:00:07 +02:00
Tobias Geerinckx-Rice
668313e07f
gnu: butt: Use conventional docdir. 
* gnu/packages/audio.scm (butt)[arguments]: Drop version from docdir.
 2022-05-01 02:00:07 +02:00
Tobias Geerinckx-Rice
027c21dcf7
gnu: butt: Use G-expressions. 
* gnu/packages/audio.scm (butt)[arguments]:
Rewrite as G-expressions.
 2022-05-01 02:00:06 +02:00
Tobias Geerinckx-Rice
cb8e483c78
gnu: butt: Use new input style where convenient. 
* gnu/packages/audio.scm (butt)[inputs]: Use new style.
 2022-05-01 02:00:06 +02:00
Tobias Geerinckx-Rice
9b66f0a74d
gnu: butt: Update to 0.1.34. 
* gnu/packages/audio.scm (butt): Update to 0.1.34.
 2022-05-01 02:00:06 +02:00
Tobias Geerinckx-Rice
1b61c75ff7
gnu: fasm: Update to 1.73.30. 
* gnu/packages/assembly.scm (fasm): Update to 1.73.30.
 2022-05-01 02:00:00 +02:00
Tobias Geerinckx-Rice
755e702db7
gnu: nnn: Use G-expressions. 
* gnu/packages/admin.scm (nnn)[arguments]:
Rewrite as G-expressions.
 2022-05-01 02:00:00 +02:00
Tobias Geerinckx-Rice
769202ecf8
gnu: nnn: Update to 4.5. 
* gnu/packages/admin.scm (nnn): Update to 4.5.
 2022-05-01 02:00:00 +02:00
Tobias Geerinckx-Rice
a30085f545
gnu: ddrescue: Update to 1.26. 
* gnu/packages/disk.scm (ddrescue): Update to 1.26.
 2022-05-01 02:00:00 +02:00
Efraim Flashner
fc7fc13716
gnu: tor: Only run sandbox tests on some architectures. 
* gnu/packages/tor.scm (tor)[arguments]: Adjust custom 'adjust-test-suite
phase to upstream code changes. Use phase on more architectures.
 2022-05-08 12:53:52 +03:00
Efraim Flashner
04d09bc372
gnu: vim: Update to 8.2.4912. 
* gnu/packages/vim.scm (vim): Update to 8.2.4912.
[arguments]: Adjust 'patch-absolute-paths phase for changes in code.
Adjust 'skip-or-fix-failing-tests phase to allow newly passing test.
 2022-05-08 12:03:18 +03:00
Tobias Geerinckx-Rice
d2c5754ef1
gnu: ispell: Update to 3.4.05. 
* gnu/packages/aspell.scm (ispell): Update to 3.4.05.
[arguments]: Don't explicitly return #t from phases.
 2022-05-01 02:00:20 +02:00
Tobias Geerinckx-Rice
d1c3e35e8f
gnu: plzip: Update to 1.10. 
* gnu/packages/compression.scm (plzip): Update to 1.10.
 2022-05-01 02:00:20 +02:00
Tobias Geerinckx-Rice
bf1bb2b546
gnu: lzlib: Update to 1.13. 
* gnu/packages/compression.scm (lzlib): Update to 1.13.
 2022-05-01 02:00:20 +02:00
Tobias Geerinckx-Rice
f36a0908f2
gnu: clzip: Update to 1.13. 
* gnu/packages/compression.scm (clzip): Update to 1.13.
 2022-05-01 02:00:20 +02:00
Tobias Geerinckx-Rice
2e99cb15e6
gnu: lunzip: Update to 1.13. 
* gnu/packages/compression.scm (lunzip): Update to 1.13.
 2022-05-01 02:00:20 +02:00
Tobias Geerinckx-Rice
c12095c680
gnu: lrzip: Update to 0.651. 
* gnu/packages/compression.scm (lrzip): Update to 0.651.
 2022-05-01 02:00:20 +02:00
Tobias Geerinckx-Rice
fcab7ac841
gnu: lziprecover: Update to 1.23. 
* gnu/packages/compression.scm (lziprecover): Update to 1.23.
 2022-05-01 02:00:20 +02:00
Tobias Geerinckx-Rice
28741adda9
gnu: audit: Update to 3.0.8. 
* gnu/packages/admin.scm (audit): Update to 3.0.8.
 2022-05-01 02:00:19 +02:00
Tobias Geerinckx-Rice
69fff28de8
gnu: libshout: Update to 2.4.6. 
* gnu/packages/xiph.scm (libshout): Update to 2.4.6.
 2022-05-01 02:00:19 +02:00
Tobias Geerinckx-Rice
0bb0984724
gnu: acpica: Update to 20220331. 
* gnu/packages/admin.scm (acpica): Update to 20220331.
 2022-05-01 02:00:19 +02:00
Tobias Geerinckx-Rice
110ed3433d
gnu: rasdaemon: Update to 0.6.8. 
* gnu/packages/linux.scm (rasdaemon): Update to 0.6.8.
 2022-05-01 02:00:19 +02:00
Tobias Geerinckx-Rice
73b0b298bf
gnu: mcelog: Update to 181. 
* gnu/packages/linux.scm (mcelog): Update to 181.
 2022-05-01 02:00:19 +02:00
Tobias Geerinckx-Rice
4e27e4652f
gnu: nsd: Update to 4.4.0. 
* gnu/packages/dns.scm (nsd): Update to 4.4.0.
 2022-05-01 02:00:19 +02:00
Tobias Geerinckx-Rice
cb75465645
gnu: gptfdisk: Correct gettext input type. 
* gnu/packages/disk.scm (gptfdisk)[inputs]: Move gettext-minimal from here…
[native-inputs]: …to here.
 2022-05-01 02:00:19 +02:00
Tobias Geerinckx-Rice
4e3d04a33b
gnu: gptfdisk: Use new input style. 
* gnu/packages/disk.scm (gptfdisk)[inputs]: Use new style.
Move field to its conventional location.
 2022-05-01 02:00:18 +02:00
Tobias Geerinckx-Rice
fdeb2479aa
gnu: gptfdisk: Update to 1.0.9. 
* gnu/packages/disk.scm (gptfdisk): Update to 1.0.9.
[arguments]: Don't explicitly return #t from phases.
 2022-05-01 02:00:18 +02:00
Tobias Geerinckx-Rice
ad99a09abe
gnu: epson-inkjet-printer-escpr: Use new style. 
* gnu/packages/cups.scm (epson-inkjet-printer-escpr)[arguments]:
Rewrite with (guix gexp).
[inputs]: Use new style.
 2022-05-01 02:00:18 +02:00
Tobias Geerinckx-Rice
20456fd016
gnu: epson-inkjet-printer-escpr: Use HTTPS home page. 
* gnu/packages/cups.scm (epson-inkjet-printer-escpr)[home-page]: Use HTTPS.
 2022-05-01 02:00:18 +02:00
Tobias Geerinckx-Rice
04544c8f1c
gnu: epson-inkjet-printer-escpr: Update to 1.7.18. 
* gnu/packages/cups.scm (epson-inkjet-printer-escpr): Update to 1.7.18.
 2022-05-01 02:00:18 +02:00
Tobias Geerinckx-Rice
cc796dc320
gnu: tor: Use G-expressions. 
* gnu/packages/tor.scm (tor)[arguments]: Rewrite using (guix gexp).
(tor-client)[arguments]: SUBSTITUTE-KEYWORD-ARGUMENTS accordingly.
 2022-05-01 02:00:18 +02:00
Tobias Geerinckx-Rice
be6d5783ba
gnu: tor: Update to 0.4.7.7. 
* gnu/packages/tor.scm (tor): Update to 0.4.7.7.
[source]: Remove patch.
* gnu/packages/patches/tor-sandbox-i686.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Remove it.
 2022-05-01 02:00:18 +02:00
Tobias Geerinckx-Rice
51b716f7f2
gnu: enblend-enfuse: Fix build. 
* gnu/packages/photo.scm (enblend-enfuse)[arguments]: Rewrite as a
keyword/gexp list.  Add a new 'add-missing-include phase to build with a
recent GCC.
 2022-05-01 02:00:17 +02:00
Tobias Geerinckx-Rice
db5c49fc62
gnu: enblend-enfuse: Remove input labels. 
* gnu/packages/photo.scm (enblend-enfuse)[native-inputs, inputs]:
Remove input labels.
 2022-05-01 02:00:17 +02:00
Tobias Geerinckx-Rice
4b08526865
gnu: Remove linux-libre@4.4 configuration files. 
This follows up on commit bc54947410.

* gnu/packages/aux-files/linux-libre/4.4-i686.conf,
gnu/packages/aux-files/linux-libre/4.4-x86_64.conf: Delete files.
* Makefile.am (AUX_FILES): Remove them.
 2022-05-01 02:00:00 +02:00
Guillaume Le Vaillant
5320ba2054
gnu: flrig: Update to 1.4.05. 
* gnu/packages/radio.scm (flrig): Update to 1.4.05.
 2022-05-07 13:50:27 +02:00
Guillaume Le Vaillant
ffcec65878
gnu: fldigi: Update to 4.1.22. 
* gnu/packages/radio.scm (fldigi): Update to 4.1.22.
 2022-05-07 13:48:01 +02:00
Rostislav Svoboda
02182c623e
gnu: openjdk17: Update to 17.0.2 
* gnu/packages/java.scm (openjdk17): Update to 17.0.2.
 2022-05-07 11:22:19 +02:00
Julien Lepiller
513f54dc5d
gnu: ocaml-cmdliner: Update to 1.1.1. 2022-05-07 08:16:31 +02:00
Julien Lepiller
fe794295ab
gnu: ocaml-reactivedata: Update to 0.3. 
* gnu/packages/ocaml.scm (ocaml-reactivedata): Update to 0.3.
 2022-05-07 08:16:17 +02:00
Ricardo Wurmus
ee70ed5bf5
gnu: Add rust-blake3-1. 
* gnu/packages/crypto.scm (rust-blake3-1): New variable.
 2022-05-06 23:13:29 +02:00
Jan (janneke) Nieuwenhuizen
0e9429544f
gnu: dezyne: Use new package style. 
* gnu/packages/dezyne.scm (dezyne)[arguments]: Convert to list of
G-Expressions.
[inputs]: Drop labels.
 2022-05-06 15:56:11 +02:00
Christopher Baines
83c1f017a6
gnu: nar-herder: Update to 0-6.ea997c6. 
* gnu/packages/package-management.scm (nar-herder): Update to 0-6.ea997c6.
 2022-05-06 14:38:52 +01:00
Ricardo Wurmus
4f15745b95
gnu: Add rust-page-size-0.4. 
* gnu/packages/crates-io.scm (rust-page-size-0.4): New variable.
 2022-05-06 15:34:31 +02:00
Ricardo Wurmus
6f5cbac67d
gnu: pigx-sars-cov-2: Update to 0.0.7. 
* gnu/packages/bioinformatics.scm (pigx-sars-cov-2): Update to 0.0.7.
[inputs]: Remove bbmap and prinseq; add r-viridis.
[arguments]: Remove autoreconf phase.
 2022-05-06 15:34:31 +02:00
Ricardo Wurmus
f550c0ccb0
gnu: Add pigx-sars-cov-2. 
* gnu/packages/bioinformatics.scm (pigx-sars-cov-2): New variable.
(pigx-sars-cov2-ww): Deprecate this package in favor of the former.
 2022-05-06 15:34:31 +02:00
Ricardo Wurmus
bec6bf64bc
gnu: rust-instant-0.1: Update to 0.1.9. 
* gnu/packages/crates-io.scm (rust-instant-0.1): Update to 0.1.9.
 2022-05-06 15:34:31 +02:00
Ricardo Wurmus
70f6d2302c
gnu: rust-lock-api-0.4: Update to 0.4.5. 
* gnu/packages/crates-io.scm (rust-lock-api-0.4): Update to 0.4.5.
 2022-05-06 15:34:31 +02:00
Ricardo Wurmus
f02f8db381
gnu: rust-parking-lot-0.11: Update to 0.11.2. 
* gnu/packages/crates-io.scm (rust-parking-lot-0.11): Update to 0.11.2.
 2022-05-06 15:34:31 +02:00
Ricardo Wurmus
d16298196c
gnu: rust-parking-lot-core-0.8: Update to 0.8.4. 
* gnu/packages/crates-io.scm (rust-parking-lot-core-0.8): Update to 0.8.4.
 2022-05-06 15:34:31 +02:00
Ludovic Courtès
8079bd3da8
gnu: tcl-tls: Use a gexp. 
* gnu/packages/tcl.scm (tcl-tls)[arguments]: Use a gexp.
 2022-05-06 15:23:07 +02:00
Ludovic Courtès
4a3f8994f4
gnu: tcl-tls: Add 'release-monitoring-url' and 'upstream-name' properties. 
* gnu/packages/tcl.scm (tcl-tls)[properties]: New field.
 2022-05-06 15:23:07 +02:00
Daniel Lowe
06d244197b
gnu: tcl: Add tcl-tls to packages. 
* gnu/packages/tcl.scm (tcl-tls): Added 1.7.22

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-06 15:23:07 +02:00
Paul A. Patience
e606e02844
gnu: python-vedo: Update to 2022.2.0. 
* gnu/packages/python-science.scm (python-vedo): Update to 2022.2.0.
[arguments]: Add 'fix-tests' phase.
[inputs]: Move fenics and python-matplotlib to propagated-inputs.
Move python-pkgconfig from here...
[native-inputs]: ...to here.
[propagated-inputs]: Add python-deprecated (and fenics and
python-matplotlib).
[description]: Make description more accurate.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-06 15:23:06 +02:00
Paul A. Patience
9edc0f3dbb
gnu: python-vedo: Disable sanity check. 
* gnu/packages/python-science.scm (python-vedo)[arguments]: Disable
sanity check.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-06 15:23:06 +02:00
Paul A. Patience
a5fec06868
gnu: python-vedo: Remove input labels. 
* gnu/packages/python-science.scm (python-vedo)[inputs]: Remove labels
and sort the inputs.
[propagated-inputs]: Remove labels.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-06 15:23:06 +02:00
Paul A. Patience
34f49d15e6
gnu: python-vedo: Honor #:tests? flag. 
* gnu/packages/python-science.scm (python-vedo)[arguments]: Adjust
custom 'check' phase to honor the #:tests? flag. Also remove its
trailing boolean.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-06 15:23:06 +02:00
Paul A. Patience
b7d2644cd0
gnu: fenics: Fix sanity check. 
* gnu/packages/simulation.scm (fenics)[arguments]: Relax pybind11
requirement to appease the sanity check.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-06 15:23:06 +02:00
Paul A. Patience
9d5160bc8a
gnu: fenics: Honor #:tests? flag. 
* gnu/packages/simulation.scm (fenics)[arguments]: Adjust custom 'check'
phase to honor the #:tests? flag.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-06 15:23:06 +02:00
Paul A. Patience
69505bec93
gnu: fenics-dolfin: Honor #:tests? flag. 
* gnu/packages/simulation.scm (fenics-dolfin)[source]: Remove trailing
boolean.
[arguments]: Adjust custom 'check' phase to honor the #:tests? flag. While
here, remove trailing booleans.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-06 15:23:06 +02:00
Ludovic Courtès
a2d44231ea
gnu: Add Guix-Modules. 
* gnu/packages/package-management.scm (guix-modules): New variable.
 2022-05-06 15:23:05 +02:00
Guillaume Le Vaillant
5e27c54e08
gnu: monero-gui: Update to 0.17.3.2. 
* gnu/packages/finance.scm (monero-gui): Update to 0.17.3.2.
 2022-05-06 15:08:41 +02:00
Guillaume Le Vaillant
4188d211c7
gnu: monero: Update to 0.17.3.2. 
* gnu/packages/finance.scm (monero): Update to 0.17.3.2.
  [source]: Remove obsolete part of snippet.
  [arguments]: Remove trailing booleans.
 2022-05-06 15:08:41 +02:00
Jan (janneke) Nieuwenhuizen
53628d6e3b
gnu: Add dezyne. 
* gnu/packages/dezyne.scm: New file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
 2022-05-06 14:39:50 +02:00
Jan (janneke) Nieuwenhuizen
984add419c
gnu: mescc-tools: Update supported-systems. 
* gnu/packages/mes.scm (mescc-tools)[supported-systems]: Add riscv32-linux,
riscv64-linux, remove powerpc64le-linux.
 2022-05-06 14:39:45 +02:00
Efraim Flashner
22b794a4a7
gnu: links: Use gexps. 
* gnu/packages/web-browsers.scm (links)[arguments]: Rewrite using gexps.
 2022-05-06 14:36:08 +03:00
Efraim Flashner
d540c6792b
gnu: links: Remove input labels. 
* gnu/packages/web-browsers.scm (links)[inputs]: Remove input labels.
 2022-05-06 14:36:08 +03:00
Efraim Flashner
1123da369d
gnu: links: Use configure-flags. 
* gnu/packages/web-browsers.scm (links)[arguments]: Add configure-flags
field. Adjust custom 'configure phase to use configure-flags.
 2022-05-06 14:36:08 +03:00
Efraim Flashner
5cf81294c0
gnu: links: Update to 2.26. 
* gnu/packages/web-browsers.scm (links): Update to 2.26.
 2022-05-06 14:36:07 +03:00
Efraim Flashner
166e0dfc44
gnu: ncdu-2: Update to 2.1.2. 
* gnu/packages/ncdu.scm (ncdu-2): Update to 2.1.2.
 2022-05-06 14:36:07 +03:00
Ricardo Wurmus
549e478f23
gnu: Add python-ipydatawidgets. 
* gnu/packages/jupyter.scm (python-ipydatawidgets): New variable.
 2022-05-06 13:02:59 +02:00
Ricardo Wurmus
221bf543e8
gnu: Add python-xyzservices. 
* gnu/packages/python-xyz.scm (python-xyzservices): New variable.
 2022-05-06 13:02:59 +02:00
Ricardo Wurmus
0d73287d97
gnu: Add python-mercantile. 
* gnu/packages/python-xyz.scm (python-mercantile): New variable.
 2022-05-06 13:02:59 +02:00
Ricardo Wurmus
ea3cfeb665
gnu: Add python-ipympl. 
* gnu/packages/jupyter.scm (python-ipympl): New variable.
 2022-05-06 13:02:58 +02:00
Ricardo Wurmus
e47b080474
gnu: Add python-traittypes. 
* gnu/packages/python-science.scm (python-traittypes): New variable.
 2022-05-06 13:02:55 +02:00
Daniel Meißner
27fc4ae397
gnu: cava: Fix build failure 
* gnu/packages/audio.scm (cava)[source]: Remove bundled iniparser.
(cava)[inputs]: Add iniparser.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-06 10:32:06 +02:00
Daniel Meißner
de4e4506c1
gnu: cava: Use G-expressions. 
* gnu/packages/audio.scm (cava)[arguments]: Use G-expressions.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-06 10:32:06 +02:00
kiasoc5
253fc14777
gnu: nftables: Update to 1.0.2. 
* gnu/packages/patches/nftables-fix-makefile.patch: New file.
* gnu/local.mk (dist_patch_DATA): Add it.
* gnu/packages/linux.scm (nftables): Update to 1.0.2.
[source]: Add patch.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-06 10:32:06 +02:00
Vincent Prat
9e630a362d
gnu: Add python-arpeggio. 
* gnu/packages/python-xyz.scm (python-arpeggio): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-06 10:32:06 +02:00
Michael Rohleder
7727757a73
gnu: ytfzf: Update to 2.3. 
* gnu/packages/patches/ytfzf-programs.patch,
* gnu/packages/patches/ytfzf-updates.patch: Delete patches.
* gnu/local.mk (dist_patch_DATA): Unregister them.
* gnu/packages/image-viewers.scm (ytfzf): Update to 2.3.
[source]: Delete patches.
[arguments]: Remove phase 'patch-script. Add phase 'install-addons,
'wrap-program.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-06 10:32:06 +02:00
Ludovic Courtès
3d05105705
gnu: slurm: Add 21.08.8. 
* gnu/packages/parallel.scm (slurm): Update to 21.08.8.
(slurm-20.11): New variable.
 2022-05-06 10:32:05 +02:00
Ludovic Courtès
c018871c04
gnu: slurm: Update to 20.11.9 [fixes CVE-2022-{29500,29501,29502}]. 
* gnu/packages/parallel.scm (slurm): Update to 20.11.9.
 2022-05-06 10:32:05 +02:00
Ricardo Wurmus
a2fb35e43d
gnu: python-ipython: Add missing input. 
* gnu/packages/python-xyz.scm (python-ipython)[propagated-inputs]: Add
python-decorator.
 2022-05-06 10:15:04 +02:00
Ricardo Wurmus
ce1746819b
gnu: python-traitlets: Update to 5.1.1. 
* gnu/packages/python-xyz.scm (python-traitlets): Update to 5.1.1.
[propagated-inputs]: Remove python-ipython-genutils, python-decorator, and
python-six.
 2022-05-06 10:15:04 +02:00
Ricardo Wurmus
471f650498
gnu: Add python-kneed. 
* gnu/packages/python-xyz.scm (python-kneed): New variable.
 2022-05-06 10:15:04 +02:00
Ricardo Wurmus
b4da7c2133
gnu: Add python-databases. 
* gnu/packages/databases.scm (python-databases): New variable.
 2022-05-06 10:15:04 +02:00
Ricardo Wurmus
43992cdbea
gnu: python-anyio: Update to 3.5.0. 
* gnu/packages/python-xyz.scm (python-anyio): Update to 3.5.0.
[arguments]: Remove phase 'fix-compatibility; disable one more test.
[propagated-inputs]: Add python-contextvars and python-dataclasses.
[native-inputs]: Add python-contextlib2 and python-trio; remove
python-iniconfig.
 2022-05-06 10:15:04 +02:00
Ricardo Wurmus
b95e3dc17c
gnu: python-multipart: Fix test failure due to PyYAML 6. 
* gnu/packages/python-xyz.scm (python-multipart)[arguments]: Patch instance of
yaml.load.
 2022-05-06 10:15:00 +02:00
Foo Chuan Wei
312879fddc
gnu: Add byacc. 
* gnu/packages/c.scm (byacc): New variable.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-05 23:56:58 +02:00
Ludovic Courtès
0780164f1f
gnu: b4: Update to 0.8.0. 
* gnu/packages/version-control.scm (b4): Update to 0.8.0.
 2022-05-05 23:56:58 +02:00
Pierre-Antoine Bouttier
6829d61bc5
gnu: Add n2p2. 
* gnu/packages/maths.scm (n2p2): New variable.

Co-authored-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-05 23:56:58 +02:00
Jonathan Brielmaier
34dbbb9172
gnu: icedove: Update to 91.9.0 [fixes CVE-2022-1520]. 
* gnu/packages/gnuzilla.scm (icedove): Update to 91.9.0.
 2022-05-05 23:09:48 +02:00
Andreas Enge
d809e71df2
gnu: python-pari-jupyter: Update to 1.4.1. 
* gnu/packages/python-xyz.scm (python-pari-jupyter): Update to 1.4.1.
  [home-page]: Update after maintainer change.
 2022-05-05 16:14:43 +02:00
Andreas Enge
a1b0fc8133
gnu: cm: Update to 0.4.0. 
* gnu/packages/algebra.scm (cm): Update to 0.4.0.
 2022-05-05 16:10:16 +02:00
Marius Bakke
b80ca672de
gnu: ungoogled-chromium: Update to 101.0.4951.54-1. 
* gnu/packages/chromium.scm (%chromium-version): Set to 101.0.4951.54.
(%ungoogled-origin, ungoogled-chromium): Update hashes.
 2022-05-03 22:35:12 +02:00
Mark H Weaver
9916933a04
gnu: icecat: Update to 91.9.0-guix0-preview1 [security fixes]. 
Includes fixes for CVE-2022-29909, CVE-2022-29911, CVE-2022-29912,
CVE-2022-29914, CVE-2022-29916, and CVE-2022-29917.

* gnu/packages/gnuzilla.scm (%icecat-version, %icecat-build-id): Update.
(icecat-source): Update gnuzilla commit, base version, and hashes.
 2022-05-03 14:56:54 -04:00
Paul A. Patience
8b2d266607
gnu: dealii: Update to 9.3.3. 
* gnu/packages/maths.scm (dealii): Update to 9.3.3.
* gnu/packages/patches/dealii-fix-compiliation-with-boost-1.78.patch:
Delete file.
* gnu/packages/patches/dealii-fix-sundials.patch: Delete file.
* gnu/local.mk (dist_patch_DATA): Adjust accordingly.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-03 18:02:28 +02:00
Paul A. Patience
240b604eda
gnu: dealii: Add SUNDIALS dependency. 
* gnu/packages/maths.scm (dealii)[propagated-inputs]: Add sundials-5.
Reformat list to clarify comment.
(dealii-openmpi)[propagated-inputs]: Add sundials-openmpi-5.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-03 18:02:28 +02:00
Paul A. Patience
d34f941c33
gnu: dealii-openmpi: Remove input labels. 
* gnu/packages/maths.scm (dealii-openmpi)[inputs]: Remove labels.
[propagated-inputs]: Same.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-03 18:02:28 +02:00
Paul A. Patience
e131f705dd
gnu: dealii: Remove trailing booleans. 
* gnu/packages/maths.scm (dealii)[snippet]: Remove trailing boolean (and
therefore the 'begin').
[native-inputs, inputs]: Reindent.
[arguments]<#:phases>: Remove trailing boolean.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-03 18:02:28 +02:00
Paul A. Patience
e648957b7b
gnu: sundials: Add 5.8.0. 
* gnu/packages/maths.scm (sundials-5, sundials-openmpi-5): New
variables.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-03 18:02:27 +02:00
Paul A. Patience
d1a6a795b3
gnu: sundials: Update to 6.2.0. 
* gnu/packages/maths.scm (sundials): Update to 6.2.0.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-03 18:02:27 +02:00
Paul A. Patience
4c509a73b7
gnu: sundials-openmpi: Add HYPRE dependency. 
* gnu/packages/maths.scm (sundials-openmpi)[propagated-inputs]: Add
hypre-openmpi.
[arguments]<#:configure-flags>: Add -DENABLE_HYPRE, -DHYPRE_INCLUDE_DIR
and -DHYPRE_LIBRARY_DIR.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-03 18:02:27 +02:00
Paul A. Patience
0d3c2c9543
gnu: sundials: Fix various issues. 
This commit fixes various issues. First, some of SUNDIALS's CMake
variables were renamed at some point between 5.2.0 and 5.7.0, in
particular KLU_ENABLE, which was changed to ENABLE_KLU. Since
sundials-julia is essentially SUNDIALS 5.2.0, its configure flags need
to be different from those of the sundials package. Second, commit
61bcd648ca, which updated SUNDIALS to
6.1.1, accidentally completely disabled PETSc support for
sundials-openmpi (PETSc is supported only with MPI) by removing the
relevant configure flags. Third, SUNDIALS's default index size is
64 bits, but PETSc's is 32 bits, and they need to be the same; this
issue is discussed in the next three paragraphs.

The default index size in SUNDIALS 3.1.1 (which was the sundials
package's version previous to the aforementioned commit) was also
64 bits (though it was configured through the SUNDIALS_INDEX_TYPE CMake
variable, which could take the values INT64_T or INT32_T), but
SUNDIALS's configure script didn't warn of any incompatibility with
PETSc's 32-bit indices. I don't know if this was an accidental omission
from the configure script or if SUNDIALS's index size didn't have to
correspond to PETSc's at the time.

Keeping 64-bit indices in SUNDIALS would require adding a package for
PETSc with 64-bit indices (using the --with-64-bit-indices configure
flag), possibly named petsc64-openmpi (to follow the style of the SCOTCH
packages, i.e., scotch, scotch32, etc., though there the unadorned
package name represents the 64-bit version, unlike the unadorned petsc),
which would in turn require a package for METIS with 64-bit
indices (using IDXTYPEWIDTH=64). However, SUNDIALS is an optional
dependency of deal.II, both of which have PETSc as an optional
dependency, and deal.II's index size (which defaults to 32 bits) must
match PETSc's. In other words, the current deal.II package can build
with SUNDIALS only if SUNDIALS has 32-bit indices.

Furthermore, users needing 64-bit indices in SUNDIALS probably also need
them in PETSc and other libraries. If and when 64-bit indices are deemed
necessary, we can add all the package variations at once (for SUNDIALS,
PETSc, METIS, deal.II and any others).

* gnu/packages/maths.scm (sundials)[source]: Reuse version in URL.
[native-inputs]: Capitalize and punctuate comment.
[inputs]: Remove petsc, now unnecessary gfortran, and obsolete
comment. Move TODO item to sundials-openmpi.
[arguments]<#:configure-flags>: Add -DSUNDIALS_INDEX_SIZE=32 to match
PETSc's 32-bit indices. Remove obsolete -DEXAMPLES_ENABLE_F77,
-DEXAMPLES_ENABLE_F90 and -DFCMIX_ENABLE. Mention new but currently
unusable -DBUILD_FORTRAN_MODULE_INTERFACE and
-DEXAMPLES_ENABLE_F2003. Rename KLU_ENABLE to ENABLE_KLU.
(sundials-openmpi): Use package/inherit.
[inputs]: Move openmpi and petsc-openmpi from here...
[propagated-inputs]: ...to here. Clarify comment.
[arguments]<#:configure-flags>: Add -DENABLE_PETSC and -DPETSC_DIR, the
equivalents of which were accidentally removed in commit
61bcd648ca.
<#:phases>: Replace a tab with spaces.
[synopsis]: Replace OpenMPI with MPI to conform to other package
synopses.
(sundials-julia)[inputs]: Add gfortran.
[arguments]<#:configure-flags>: Set only, and manually, -DCMAKE_C_FLAGS,
-DSUNDIALS_INDEX_SIZE, -DKLU_ENABLE, -DKLU_INCLUDE_DIR,
-DKLU_LIBRARY_DIR and -DLAPACK_ENABLE instead of inheriting from the
sundials package, because some of SUNDIALS's CMake variables have
changed name.
[synopsis]: Capitalize “LAPACK”.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-03 18:02:27 +02:00
Paul A. Patience
a3b6a4df6c
gnu: petsc-openmpi: Fix header inclusions. 
* gnu/packages/maths.scm (petsc-openmpi)[arguments]: Add
'patch-header-inclusions' phase.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2022-05-03 18:02:27 +02:00
Ludovic Courtès
7855a9366b
services: pipefs: Correctly handle lack of extensions. 
Previously, in the absence of extensions of 'pipefs-service-type', we'd
get a wrong-type-arg exception while folding services:

  In gnu/services/nfs.scm:
     134:37  1 (_ #<<pipefs-configuration> mount-point: "/var/lib/nfs…> …)
  In ice-9/boot-9.scm:
    1685:16  0 (raise-exception _ #:continuable? _)
  In procedure car: Wrong type argument in position 1 (expecting pair): ()

* gnu/services/nfs.scm (pipefs-service-type)[extend]: Gracefully handle
the case where VALUES is the empty list, as done in 'gss-service-type'.
 2022-05-03 18:02:27 +02:00
Leo Famulari
654f878f0b
gnu: Mutt: Update to 2.2.4. 
* gnu/packages/mail.scm (mutt): Update to 2.2.4.
 2022-05-02 19:31:42 -04:00