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361 Commits

Author SHA1 Message Date
Ivan Petkov
a6ab6b7877
build-system/cargo: Expand transitive crate sources. 
* guix/build/cargo: (package-cargo-inputs): Add it.
(package-cargo-development-inputs): Add it.
(crate-closure): Add it.
(expand-crate-sources): Add it.
(lower)[private-keywords]: Add #:cargo-inputs and
[bag]: Use expand-crate-sources to augment build-inputs.

Signed-off-by: Chris Marusich <cmmarusich@gmail.com>
 2019-06-11 18:05:41 -07:00
Ludovic Courtès
30eb738366
build-system/guile: Add #:not-compiled-file-regexp. 
* guix/build/guile-build-system.scm (build): Add
 #:not-compiled-file-regexp and honor it.
* guix/build-system/guile.scm (guile-build): Likewise.
(guile-cross-build): Likewise.
 2019-06-02 22:01:34 +02:00
Marius Bakke
57df83e07d
Merge branch 'staging' into core-updates 2019-05-25 00:25:15 +02:00
Ricardo Wurmus
6490cd31cc
guix: Update to Bioconductor 3.9. 
* guix/build-system/r.scm (bioconductor-uri): Use 3.9 archive URL.
* guix/import/cran.scm (%bioconductor-version): Update to 3.9.
 2019-05-06 00:14:27 +02:00
Marius Bakke
3b458d5462
Merge branch 'master' into core-updates 2019-05-01 23:11:41 +02:00
Julien Lepiller
c3634df2a4
gnu: ocaml@4.02: Remove the package, affected by a CVE, and its dependent 
packages.

This fixes <https://bugs.gnu.org/27462>.

* gnu/packages/ocaml.scm (ocaml-4.02, camlp4-4.02, ocaml4.02-menhir)
(ocaml4.02-lablgtk, ocaml4.02-findlib, ocaml4.02-ounit)
(ocaml4.02-camlzip, ocaml4.02-ocamlmod, ocaml4.02-zarith)
(ocaml4.02-qcheck, ocaml4.02-qtest, ocaml4.02-stringext)
(ocaml4.02-bisect, ocaml4.02-bitstring, ocaml4.02-result)
(ocaml4.02-topkg, ocaml4.02-rresult, ocaml4.02-sqlite3, ocaml4.02-csv)
(ocaml4.02-mtime, ocaml4.02-cmdliner, ocaml4.02-fmt, ocaml4.02-astring)
(ocaml4.02-alcotest, ocaml4.02-ppx-tools, ocaml4.02-react, ocaml4.02-ssl)
(ocaml4.02-lwt, ocaml4.02-lwt-log, ocaml4.02-logs, ocaml4.02-fpath)
(ocaml4.02-bos, ocaml4.02-xmlm, ocaml4.02-ulex, ocaml4.02-uchar)
(ocaml4.02-uutf, ocaml4.02-jsonm, ocaml4.02-ocurl, ocaml4.02-base64)
(ocaml4.02-omake, ocaml4.02-batteries, ocaml4.02-pcre, ocaml4.02-oasis)
(ocaml4.02-js-build-tools, ocaml4.02-bin-prot, ocaml4.02-fieldslib)
(ocaml4.02-ppx-core, ocaml4.02-ppx-optcomp, ocaml4.02-ppx-driver)
(ocaml4.02-cppo, ocaml4.02-ppx-deriving, ocaml4.02-ppx-type-conv)
(ocaml4.02-ppx-inline-test, ocaml4.02-ppx-bench, ocaml4.02-ppx-compare)
(ocaml4.02-sexplib, ocaml4.02-typerep, ocaml4.02-variantslib)
(ocaml4.02-ppx-sexp-conv, ocaml4.02-ppx-variants-conv)
(ocaml4.02-ppx-here, ocaml4.02-ppx-assert, ocaml4.02-ppx-enumerate)
(ocaml4.02-ppx-let, ocaml4.02-ppx-typerep-conv, ocaml4.02-ppx-sexp-value)
(ocaml4.02-ppx-pipebang, ocaml4.02-ppx-bin-prot, ocaml4.02-ppx-fail)
(ocaml4.02-ppx-custom-printf, ocaml4.02-ppx-sexp-message)
(ocaml4.02-ppx-fields-conv, ocaml4.02-seq, ocaml4.02-re)
(ocaml4.02-ppx-expect, ocaml4.02-ppx-jane, ocaml4.02-core-kernel)
(ocaml4.02-async-kernel, ocaml4.02-async-rpc-kernel, ocaml4.02-core)
(ocaml4.02-async-unix, ocaml4.02-async-extra, ocaml4.02-async)
(ocaml4.02-ocplib-endian, ocaml4.02-easy-format, optcomp)
(ocaml4.02-piqilib, ocaml4.02-uuidm, ocaml4.02-graph, ocaml4.02-piqi)
(ocaml4.02-camomile, ocaml4.02-zed, ocaml4.02-lambda-term): Remove variables.
* guix/build-system/ocaml.scm (default-ocaml4.02)
(default-ocaml4.02-findlib, package-with-ocaml4.02)
(strip-ocaml4.02-variant): Remove variables.
 2019-04-25 19:01:31 +02:00
Danny Milosavljevic
88e13c2587
build-system/linux-module: Support module source versioning. 
* guix/build-system/linux-module.scm (make-linux-module-builder)
[native-inputs]: Add linux.
[arguments]<#:phases>[install]: Install "System.map" and "Module.symvers".
* guix/build/linux-module-build-system.scm (configure): Delete procedure.
(%standard-phases): Delete "configure" phase.
 2019-04-12 00:13:34 +02:00
Danny Milosavljevic
ce6312999f
Add (guix build-system linux-module). 
* guix/build/linux-module-build-system.scm: New file.
* guix/build-system/linux-module.scm: New file.
* doc/guix.texi (Build Systems): Document it.
* Makefile.am (MODULES): Add them.
 2019-04-11 17:50:18 +02:00
Ivan Petkov
1d3acde508
build-system/cargo: refactor phases to successfully build 
* guix/build-system/cargo.scm (%cargo-build-system-modules):
Add (json parser).
(cargo-build):
[vendor-dir]: Define flag and pass it to builder code.
[cargo-test-flags]: Likewise.
[skip-build?]: Likewise.
* guix/build/cargo-build/system.scm (#:use-module): use (json parser).
(package-name->crate-name): Delete it.
(manifest-targets): Add it.
(has-executable-target?): Add it.
(configure): Add #:vendor-dir name and use it.
Don't touch Cargo.toml.
Don't symlink to duplicate inputs.
Remove useless registry line from cargo config.
Define RUSTFLAGS to lift lint restrictions.
(build): Add #:skip-build? flag and use it.
(check): Likewise.
Add #:cargo-test-flags and pass it to cargo.
(install): Factor source logic to install-source.
Define #:skip-build? flag and use it.
Only install if executable targets are present.
(install-source): Copy entire crate directory not just src.
[generate-checksums] pass dummy file for unused second argument.
(%standard-phases): Add install-source phase.

Signed-off-by: Chris Marusich <cmmarusich@gmail.com>
 2019-04-09 03:09:00 -07:00
Marius Bakke
8c14f7f8a7
Merge branch 'staging' into core-updates 2019-03-23 23:16:55 +01:00
Julien Lepiller
78b3748c1c
guix: dune-build-system: Add a package parameter. 
* guix/build-system/dune.scm: Add a package parameter.
* guix/build/dune.scm (build, test, install): Use it.
* doc/guix.texi: Document it.
 2019-03-23 22:58:52 +01:00
Efraim Flashner
4e4c311465
build: Add rakudo-build-system. 
* guix/build-system/rakudo.scm,
guix/build/rakudo-build-system.scm: New files.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build System): Document it.
 2019-03-23 22:26:48 +02:00
Marius Bakke
ad4910eec0
build-system/meson: Add #:allowed-references and #:disallowed-references. 
* guix/build-system/meson.scm (meson-build): Add support for
  #:allowed-references and #:disallowed-references.
 2019-03-21 19:23:47 +01:00
Maxim Cournoyer
2f33a7321e
cmake: Generate documentation. 
To prevent complicating the dependencies of a core tool, a new variant,
CMAKE-MINIMAL is introduced and the CMake build system is configured to use it
by default.  The regular CMAKE package gains a manpage, info manual as well
as HTML documentation.

Fixes issue #33497 (https://bugs.gnu.org/33497).

* gnu/packages/cmake.scm (gnu): Use modules (gnu packages python-xyz),
(gnu packages texinfo) and (srfi srfi-1).
(cmake-minimal): Rename the original cmake variable to this.
[phases]{configure}: Extract the configure script arguments to...
[configure-flags]: here.
[properties]: Set the HIDDEN? property to #t.
(cmake): New variable, which inherits from CMAKE-MINIMAL.
[phases]{move-html-doc}: Add phase.
[native-inputs]: Add PYTHON-SPHINX and TEXINFO.
[outputs]: Add the "doc" output.
[properties]: Clear the inherited HIDDEN? property.
* guix/build-system/cmake.scm (default-cmake): Use CMAKE-MINIMAL instead of
CMAKE.
 2019-03-20 21:38:19 -04:00
Ludovic Courtès
ee71d44e60
build-system/glib-or-gtk: Support #:disallowed-references. 
* guix/build-system/glib-or-gtk.scm (glib-or-gtk-build): Add
 #:disallowed-references and honor it.
 2019-03-15 23:27:58 +01:00
Leo Famulari
e3900a4d64
build-system/go: Build with a filesystem union of Go dependencies. 
This basically changes (guix build-system go) so that instead of looking
up its dependencies in a list of directories in $GOPATH, all the
Go dependencies are symlinked into a single directory.

Fixes <https://bugs.gnu.org/33620>.

* guix/build/go-build-system.scm (setup-go-environment): New variable.
(setup-environment, install-source): Remove variables.
(unpack): Unpack the source relative to $GOPATH.
(install): Do not install the compiled objects in the 'pkg' directory.
Install the source code in this phase, and only install the source of
the package named by IMPORT-PATH.
* doc/guix.texi (Build Systems): Adjust accordingly.
* gnu/packages/docker.scm (docker): Import (guix build union) on the build side
and adjust to build phase name changes in (guix build-system go).
* gnu/packages/shellutils.scm (direnv): Likewise.
* gnu/packages/databases.scm (mongo-tools)[arguments]:
Set '#:install-source #f'.
* gnu/packages/music.scm (demlo)[arguments]: Move the 'install-scripts'
phase after the 'install' phase.
 2019-03-14 15:34:26 -04:00
Ivan Petkov
7d141788b1
gnu: rust: Factor out "cargo-utils" from "cargo-build-system". 
* guix/build/cargo-utils.scm: New file.
* Makefile.am (MODULES): Add it.
* guix/build-system/cargo.scm (%cargo-utils-modules): New variable.
(%cargo-build-system-modules): Use it.
* guix/build/cargo-build-system.scm (file-sha256, generate-checksums): Move
from here...
* guix/build/cargo-utils.scm: ...to here.
* gnu/packages/rust.scm (rust-1.19.0)[arguments]<#:imported-modules>: Use
%cargo-utils-modules.
<#:phases>[patch-cargo-checksums]: Use (guix build cargo-utils).
* gnu/packages/gnuzilla.scm (icecat):
[arguments]<#:imported-modules>: Use %cargo-utils-modules.
<#phases>[patch-cargo-checksums]: import (guix build cargo-utils).

Signed-off-by: Danny Milosavljevic <dannym@scratchpost.org>
 2019-03-01 08:20:50 +01:00
Ricardo Wurmus
b96909c5c1
guix: scons: Fix module reference. 
* guix/build-system/scons.scm (default-scons): Find "scons" package in
(gnu packages python-xyz) instead of (gnu packages python).
 2019-01-15 18:15:07 +01:00
Ricardo Wurmus
d4d9a1ece0
gnu: Update texlive packages. 
* guix/build-system/texlive.scm (%texlive-tag, %texlive-revision): Update to
texlive-2018.2, revision 49435.
* gnu/packages/tex.scm (texlive-dvips, texlive-generic-unicode-data,
texlive-generic-dehyph-exptl, texlive-generic-hyph-utf8, texlive-fontname,
texlive-fonts-cm, texlive-tex-plain, texlive-latex-base,
texlive-latex-graphics, texlive-latex-graphics, texlive-latex-oberdiek,
texlive-latex-tools, texlive-latex-l3kernel, texlive-latex-l3packages,
texlive-latex-fontspec, texlive-latex-amsmath, texlive-latex-amscls,
texlive-latex-babel, texlive-latex-cyrillic, texlive-latex-eqparbox,
texlive-latex-ifplatform, texlive-latex-etoolbox, texlive-latex-galois,
texlive-latex-polyglossia, texlive-tex-texinfo, texlive-latex-changebar,
texlive-latex-fancyhdr, texlive-latex-overpic, texlive-latex-parskip,
texlive-metapost, texlive-latex-ucs, texlive-generic-pdftex,
texlive-latex-media9, texlive-latex-ocgx2, texlive-latex-koma-script,
texlive-generic-listofitems, texlive-bibtex, texlive-context-base): Update
hashes.
(texlive-latex-fontspec)[arguments]: Remove custom build target.
(texlive-latex-dinbrief)[arguments]: Add build phase "fix-encoding-error".
(texlive-latex-xkeyval): New variable.
(texlive-latex-pstool)[source]: Fetch from new location.
[build-system]: Use trivial-build-system.
[arguments]: Write simple builder.
[propagated-inputs]: Add texlive-latex-l3kernel, texlive-latex-tools, and
texlive-latex-xkeyval.
[synopsis]: Fix typo.
 2019-01-10 22:43:09 +01:00
Ludovic Courtès
804b9b18ac
build-system/asdf: 'package-with-build-system' accesses inputs lazily. 
Fixes a bug whereby we would, at the top-level (while evaluation
lisp.scm package definitions), attempt to access package inputs.
Because of circular dependencies, this could lead to unbound variables
as reported by Arun Isaac <arunisaac@systemreboot.net> at
<https://debbugs.gnu.org/cgi/bugreport.cgi?bug=33801#56>.

* guix/build-system/asdf.scm (package-with-build-system)[transform]
(new-propagated-inputs): Turn into a procedure.
Adjust user accordingly.
 2019-01-09 15:01:40 +01:00
Julien Lepiller
6e8986c838
build: Add dune-build-system. 
* guix/build/dune-build-system.scm,
  guix/build-system/dune.scm: New files.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build Systems): Document dune-build-system.
* guix/build-system/ocaml.scm (lower, default-findlib, default-ocaml): Export
them.
(package-with-explicit-ocaml): Also transform packages built with
dune-build-system.
 2018-12-18 22:16:23 +01:00
Marius Bakke
4820b75de0
Merge branch 'master' into core-updates 2018-11-24 19:44:05 +01:00
Jelle Licht
3fe6fcc45f
build-system: clojure-build-system: Fix %default-clojure location. 
* guix/build-system/clojure.scm (%default-clojure): Use new package path.
 2018-11-24 16:25:55 +01:00
Marius Bakke
4f70db97a0
Merge branch 'master' into core-updates 2018-11-20 01:14:12 +01:00
Alex Vong
df730f6757
build-system: Add 'clojure-build-system'. 
* guix/build-system/clojure.scm, guix/build/clojure-build-system.scm: New
files.
* guix/build/clojure-utils.scm (@*, @@*): New macros.
(%source-dirs, %test-dirs, %compile-dir, %main-class, %omit-source?,
%aot-include, %aot-exclude, %tests?, %test-include, %test-exclude,
%clojure-regex): New variables.
(package-name->jar-names, canonicalize-relative-path, find-files*,
file-sans-extension, relative-path->clojure-lib-string, find-clojure-libs,
compiled-from?, include-list\exclude-list, eval-with-clojure, create-jar):
New procedures.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build Systems): Document 'clojure-build-system'.
 2018-11-19 12:07:44 +01:00
Julien Lepiller
564cf93f2a
gnu: ocaml: Update to 4.7.0. 
Update ocaml to the latest version and fixes dependent packages by
updating them or by adding new inputs, such as ocaml-num and ocamlbuild,
that were removed from the core ocaml package. Rename packages that
cannot be built with the new compiler with an ocaml4.02 prefix. Add
ocaml4.02 dependencies.

* gnu/packages/ocaml.scm (ocaml): Update to 4.7.0.
(ocaml-4.02, ocamlbuild, camlp4-4.02, ocaml-num, ocaml4.02-menhir)
(ocaml4.02-lablgtk, ocaml4.02-findlib, ocaml4.02-ounit, ocaml4.02-camlzip)
(ocaml4.02-ocamlmod, ocaml4.02-zarith, ocaml4.02-qcheck, ocaml4.02-qtest)
(ocaml4.02-stringext, ocaml4.02-bisect, dune, ocaml-migrate-parsetree)
(ocaml-ppx-tools-versioned, ocaml-ppx-tools-versioned)
(ocaml4.02-bitstring, ocaml4.02-result, ocaml4.02-topkg, ocaml4.02-rresult)
(ocaml4.02-sqlite3, ocaml4.02-csv, ocaml4.02-mtime, ocaml4.02-cmdliner)
(ocaml4.02-fmt, ocaml4.02-astring, ocaml4.02-alcotest, ocaml4.02-ppx-tools)
(ocaml4.02-react, ocaml4.02-ssl, ocaml4.02-lwt, ocaml-lwt-log)
(ocaml4.02-lwt-log, ocaml4.02-logs, ocaml4.02-fpath, ocaml4.02-bos)
(ocaml4.02-xmlm, ocaml4.02-ulex, ocaml4.02-uchar, ocaml4.02-uutf)
(ocaml4.02-jsonm, ocaml4.02-ocurl, ocaml4.02-base64, ocaml4.02-omake)
(ocaml4.02-batteries, ocaml4.02-pcre, ocaml4.02-oasis)
(ocaml4.02-js-build-tools, ocaml4.02-cppo, ocaml-seq, ocaml4.02-seq)
(ocaml4.02-re, ocaml4.02-ocplib-endian, ocaml4.02-easy-format)
(ocaml4.02-piqilib, ocaml4.02-uuidm, ocaml4.02-graph, ocaml4.02-piqi)
(ocaml4.02-camomile, ocaml4.02-zed, ocaml4.02-lambda-term): New packages.
(opam): Update to 2.0.0.
(camlp4): Update to 4.07+1.
(camlp5): Update to 7.06.
(hevea): Update to 2.32.
(coq)[inputs]: Add ocaml-num.
(emacs-tuareg): Update to 2.2.0.
(ocaml-menhir)[native-inputs]: Add ocamlbuild.
(ocaml-lablgtk): Update to 2.18.6.
(unison)[inputs]: Use ocaml-4.02.
(ocaml-findlib): Update to 1.8.0.
(ocaml-ounit)[native-inputs]: Add ocamlbuild.
(ocamlmod): Update to 0.0.9.
(ocaml-frontc)[arguments]: Use ocaml-4.02.
(ocaml-qcheck)[native-inputs]: Add ocamlbuild.
(ocaml-qtest)[native-inputs]: Remove ocaml-findlib and add ocamlbuild.
(ocaml-stringext)[native-inputs]: Add ocamlbuild.
(ocaml-bisect): Update to 1.3.1.
(ocaml4.01-bisect): Downgrade to 1.3.
(ocaml-bitstring): Update to 3.1.0.
(ocaml-topkg)[native-inputs]: Add ocamlbuild.
(ocaml-rresult)[native-inputs]: Add ocamlbuild.
(ocaml-sqlite3)[native-inputs]: Add ocamlbuild.
(ocaml-csv)[native-inputs]: Add ocamlbuild.
(ocaml-mtime)[native-inputs]: Add ocamlbuild.
(ocaml-cmdliner)[native-inputs]: Add ocamlbuild.
(ocaml-fmt)[native-inputs]: Add ocamlbuild.
(ocaml-astring)[native-inputs]: Add ocamlbuild.
(ocaml-alcotest)[native-inputs]: Add ocamlbuild.
(ocaml-ppx-tools)[native-inputs]: Add ocamlbuild.
(ocaml-react)[native-inputs]: Add ocamlbuild.
(ocaml-ssl)[arguments]: Return #t in phases.
(ocaml-lwt): Update to 4.1.0.
(ocaml-logs)[native-inputs]: Add ocamlbuild.
(ocaml-fpath)[native-inputs]: Add ocamlbuild.
(ocaml-bos)[native-inputs]: Add ocamlbuild.
(ocaml-xmlm): Update to 1.3.0.
(ocaml-ulex): Update to 1.2.0.
(ocaml-uchar)[native-inputs]: Add ocamlbuild.
(ocaml-uutf): Update to 1.0.1.
(ocaml-jsonm): Update to 1.0.1.
(ocaml-ocurl): Update to 0.8.2.
(ocaml-base64)[native-inputs]: Add ocamlbuild.
(ocamlify)[native-inputs]: Use ocaml-4.02.
(omake): Update to 0.10.3.
(ocaml-batteries): Update to 2.9.0.
(ocaml-pcre)[native-inputs]: Add ocamlbuild.
(ocaml-expect): Update 0.0.6.
(ocaml4.02-fileutils): Update to 0.5.3.
(ocaml-oasis): Update 0.4.11.
(ocaml-js-build-tools)[native-inputs]: Add ocamlbuild.
(ocaml-bin-prot): Rename to ocaml4.02-bin-prot.
(ocaml-fieldslib): Rename to ocaml4.02-fieldslib.
(ocaml-ppx-core): Rename to ocaml4.02-ppx-core.
(ocaml-ppx-optcomp): Rename to ocaml4.02-ppx-optcomp.
(ocaml-ppx-driver): Rename to ocaml4.02-ppx-driver.
(ocaml-cppo): Update to 1.6.5.
(ocaml-ppx-deriving): Rename to ocaml4.02-ppx-deriving.
(ocaml-ppx-type-conv): Rename to ocaml4.02-ppx-type-conv.
(ocaml-ppx-inline-test): Rename to ocaml4.02-ppx-inline-test.
(ocaml-ppx-bench): Rename to ocaml4.02-ppx-bench.
(ocaml-ppx-compare): Rename to ocaml4.02-ppx-compare.
(ocaml-sexplib): Rename to ocaml4.02-sexplib.
(ocaml-typerep): Rename to ocaml4.02-typerep.
(ocaml-variantslib): Rename to ocaml4.02-variantslib.
(ocaml-ppx-sexp-conv): Rename to ocaml4.02-ppx-sexp-conv.
(ocaml-ppx-variants-conv): Rename to ocaml4.02-ppx-variants-conv.
(ocaml-ppx-here): Rename to ocaml4.02-ppx-here.
(ocaml-ppx-assert): Rename to ocaml4.02-ppx-assert.
(ocaml-ppx-enumerate): Rename to ocaml4.02-ppx-enumerate.
(ocaml-ppx-let): Rename to ocaml4.02-ppx-let.
(ocaml-ppx-typerep-conv): Rename to ocaml4.02-ppx-typerep-conv.
(ocaml-ppx-sexp-value): Rename to ocaml4.02-ppx-sexp-value.
(ocaml-ppx-pipebang): Rename to ocaml4.02-ppx-pipebang.
(ocaml-ppx-bin-prot): Rename to ocaml4.02-ppx-bin-prot.
(ocaml-ppx-fail): Rename to ocaml4.02-ppx-fail.
(ocaml-ppx-custom-printf): Rename to ocaml4.02-ppx-custom-printf.
(ocaml-ppx-sexp-message): Rename to ocaml4.02-ppx-sexp-message.
(ocaml-ppx-fields-conv): Rename to ocaml4.02-ppx-fields-conv.
(ocaml-re): Update to 1.8.0.
(ocaml-ppx-expect): Rename to ocaml4.02-ppx-expect.
(ocaml-ppx-jane): Rename to ocaml4.02-ppx-jane.
(ocaml-core-kernel): Rename to ocaml4.02-core-kernel.
(ocaml-async-kernel): Rename to ocaml4.02-async-kernel.
(ocaml-async-rpc-kernel): Rename to ocaml4.02-async-rpc-kernel.
(ocaml-core): Rename to ocaml4.02-core.
(ocaml-async-unix): Rename to ocaml4.02-async-unix.
(ocaml-async-extra): Rename to ocaml4.02-async-extra.
(ocaml-async): Rename to ocaml4.02-async.
(ocaml-ocplib-endian)[native-inputs]: Update to 1.0.
(ocaml-cstruct): Rename to ocaml4.02-cstruct.
(ocaml-hex): Rename to ocaml4.02-hex.
(ocaml-ezjsonm): Rename to ocaml4.02-ezjsonm.
(ocaml-uri): Rename to ocaml4.02-uri.
(optcomp): Use ocaml-4.02.
(ocaml-piqilib): Update to 0.6.14.
(ocaml-uuidm)[native-inputs]: Add ocamlbuild.
(ocaml-graph): Update to 1.8.8.
(ocaml-piqi): Update to 0.7.6.
(bap): Update to 1.3.0.
(ocaml-camomile): Update to 1.0.1.
(ocaml-jbuilder): Use ocaml-4.02.
(ocaml-lambda-term): Update to 1.13.
(ocaml-utop): Update to 2.2.0.
(ocaml-integers)[native-inputs]: Add ocamlbuild.
(ocaml-ctypes): Update to 0.14.0.
(ocaml-ocb-stubblr)[native-inputs]: Add ocamlbuild.
(ocaml-tsdl)[native-inputs]: Add ocamlbuild.
* gnu/packages/machine-learning.scm (ocaml-mcl): Use ocaml-4.02.
* gnu/packages/maths.scm (cubicle): Update to 1.1.2.
* gnu/packages/patches/ocaml-bisect-fix-camlp4-in-another-directory.patch:
Update patch.
* guix/build-system/ocaml.scm: (default-ocaml4.02, default-ocaml4.02-findlib)
(package-with-ocaml4.02, strip-ocaml4.02-variant): New variables.
 2018-11-18 18:51:08 +01:00
Marius Bakke
55174e668f
Merge branch 'master' into core-updates 2018-11-07 21:09:57 +01:00
Ricardo Wurmus
9da4848632
guix: Update to Bioconductor 3.8. 
* guix/import/cran.scm (%bioconductor-version): Update to 3.8.
* guix/build-system/r.scm (bioconductor-uri): Update archive URL.
 2018-11-06 18:21:24 +01:00
Marius Bakke
ffddb42d6c
Merge branch 'master' into core-updates 2018-10-21 18:06:02 +02:00
Leo Famulari
7277d06d8b
gnu: Use pypi.org. 
<pypi.io> redirects to <pypi.org>.

* guix/build-system/python.scm (pypi-uri): Replace pypi.io with pypi.org.
* guix/import/pypi.scm (pypi-url?): Likewise.
* tests/pypi.scm: Likewise.
 2018-10-18 23:46:33 -04:00
Leo Famulari
e8bd1946ec
Merge branch 'master' into core-updates 2018-10-07 20:49:14 -04:00
Leo Famulari
68afb9dccf
build-system/glib-or-gtk: Build 'in-source' by default. 
* guix/build-system/glib-or-gtk.scm (glib-or-gtk-build): Change to
'out-of-source? #f'.
* gnu/packages/audio.scm (audacity)[arguments]: Use the default 'out-of-source?'
setting.
* gnu/packages/libreoffice.scm (libreoffice): Likewise.
 2018-10-07 16:13:51 -04:00
Marius Bakke
cf6db76d2a
Merge branch 'master' into core-updates 2018-10-05 19:15:39 +02:00
Timothy Sample
bb6419f374
build-system: haskell: Add #:cabal-revision argument. 
Add a #:cabal-revision argument for specifying which Cabal file revision
from Hackage should be used.

* guix/build-system/haskell.scm (source-url->revision-url): New function.
(lower): Accept a cabal-revision keyword argument, convert it to an
origin record, and add it to the resulting bag's host-inputs.
(haskell-build): Pass the cabal-revision input to the builder as an
argument.
* guix/build/haskell-build-system.scm (patch-cabal-file): New phase.
(%standard-phases): Add it.
 2018-10-01 12:12:08 +02:00
Leo Famulari
d763940711
Merge branch 'master' into core-updates 2018-09-13 13:32:39 -04:00
Leo Famulari
875d068176
Adjust all users of (gnu packages ldc) to use (gnu packages dlang). 
This is a followup to commit 98d6543f86.

* gnu/packages/bioinformatics.scm, guix/build-system/dub.scm: Adjust
accordingly.
 2018-09-10 15:44:32 -04:00
Marius Bakke
839167ff9d
Merge branch 'staging' into core-updates 2018-08-25 16:44:07 +02:00
Marius Bakke
bf91e6835d
build-system/meson: Strip RUNPATH and remove PatchELF traces. 
* guix/build-system/meson.scm (%meson-build-system-modules): Don't
import (guix build rpath).
* guix/build/meson-build-system.scm (fix-runpath): Rename to ...
(shrink-runpath): ... this.  Update docstring.  Remove AUGMENT-RPATH calls and
related code.
(%standard-phases): Add 'shrink-runpath'.
 2018-08-22 18:01:09 +02:00
Pierre Neidhardt
dece8c91a9
build-system/asdf: Fix typo in "dependency". 
* guix/build-system/asdf.scm (default-lisp): Fix typo in "dependency".
 2018-08-21 16:27:03 +02:00
Marius Bakke
1af575f04d
Merge branch 'master' into staging 2018-07-28 18:34:59 +02:00
Marius Bakke
94eb59fb4a
build-system/meson: Remove RUNPATH workarounds. 
* guix/build-system/meson.scm (default-patchelf): Remove.
(lower)[build-inputs]: Remove PATCHELF.
(meson-build): Don't delete 'fix-runpath' phase on armhf.
* guix/build/meson-build-system.scm (configure): Add "--c_link_args" and
  "-cpp_link_args" instead of setting LDFLAGS.
(meson-build): Don't apply 'fix-runpath' phase.
 2018-07-28 14:54:18 +02:00
Ludovic Courtès
2a3b1b3235
build-system: Add 'guile-build-system'. 
* guix/build-system/guile.scm, guix/build/guile-build-system.scm: New
files.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build Systems): Document 'guile-build-system'.
 2018-07-23 12:25:31 +02:00
Marius Bakke
cb4b508cd6
build-system/meson: Really skip the 'fix-runpath' phase on armhf. 
This follows up commit d5b5a15a40 which doesn't
work because %current-system etc expands before the actual build.

Fixes <https://bugs.gnu.org/31719>.

* guix/build-system/meson.scm (meson-build)[builder]: Compare against the
already existing "system" variable rather than (%current-system).
 2018-07-02 12:07:58 +02:00
Ricardo Wurmus
32eb44240d
build-system/r: Accept #:r argument. 
* guix/build-system/r.scm (lower): Add #:r to private-keywords.
 2018-06-18 13:51:28 +02:00
Ricardo Wurmus
0ebef06dbe
build-system/r: Update to Bioconductor 3.7. 
This is a follow-up to 41f17554d8.

* guix/build-system/r.scm (bioconductor-uri): Update to version 3.7.
 2018-06-05 09:58:52 +02:00
Danny Milosavljevic
b87fc9ab9d
gnu: android-make-stub: Update to 0.6.0. 
* gnu/packages/android.scm (android-make-stub): Update to 0.6.0.
* guix/build-system/android-ndk.scm (android-ndk-build): Modify.
(lower): Modify.
 2018-05-10 15:35:28 +02:00
Danny Milosavljevic
c6ee92c41b
gnu: Add android-googletest. 
* gnu/packages/android.scm (android-googletest): New variable.
* guix/build-system/android-ndk.scm (android-ndk-build): Use it.
 2018-05-10 02:12:03 +02:00
Danny Milosavljevic
9ed36cd3d6
build-system: android-ndk: Support unit tests. 
* guix/build-system/android-ndk.scm (android-ndk-build): Add googletest.
* guix/build/android-ndk-build-system.scm (check): Check whether tests are
enabled.  Run root-level tests as well.
 2018-05-10 01:06:22 +02:00
Danny Milosavljevic
436515cdb8
build: Add the Android NDK build-system. 
* guix/build-system/android-ndk.scm: New file.
* guix/build/android-ndk-build-system.scm: New file.
* Makefile.am: Add them.
 2018-05-09 19:16:04 +02:00
Maxim Cournoyer
facc0a96a1
build-system: emacs: Add improved check phase. 
* guix/build-system/emacs.scm (emacs-build): Add #:test-command keyword
argument. Remove #:configure-flags and #:test-target keyword arguments.
* guix/build/emacs-build-system.scm (check): New procedure.
(%standard-phases): Register check phase after the build phase.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2018-04-20 00:49:53 +05:30
Nikolai Merinov
f342bb58fe
gnu: rust: Update rust to 1.24.1. 
* gnu/packages/rust.scm (rust-bootstrap): Freeze bootstrap version to 1.22.1.
Reorganize bootstrap binaries to match new "rust" package structure with two
ouputs "out" with Rust compiler and "cargo" with Cargo package manager.
Replace all "system*" by "invoke".
(rust-1.23): Rename "rustc" to "rust".  Update sha256 for tarball.  Add cargo
related dependencies.  Install "cargo" as separate "rust" output.  Remove
substitutes for parts that were fixed in "rustc" source code.  Install
documentation to separate "doc" output.  Update configuration according to
changes in "rustc" source code.  Replace all "system*" by "invoke".
(rust): Create package for 1.24.1 rust release based on rust-1.23 release.
* guix/build-system/cargo.scm (default-rust): Replace "default-cargo" and
"default-rustc" functions with "default-rust" function.
(cargo-build-system): Take only one package as "rust" source.  Use "rustc" of
default output of "rust" package, use "cargo" as "cargo" output of "rust"
package.
 2018-03-30 15:46:53 +02:00
Marius Bakke
061f204dcd
Revert "build-system/meson: Use 'target-arm32?' for armhf-linux case." 
This requires adding (guix utils) to the build inputs, and causes too many
rebuilds for now.

This reverts commit 24a2e9172a.
 2018-03-20 00:06:50 +01:00
Efraim Flashner
24a2e9172a
build-system/meson: Use 'target-arm32?' for armhf-linux case. 
* guix/build-system/meson.scm (lower, meson-build): Replace armhf-linux
detection with 'target-arm32?' macro.
 2018-03-19 22:07:37 +02:00
Marius Bakke
7ace97395f
Merge branch 'master' into staging 2018-03-18 01:09:25 +01:00
Marius Bakke
d5b5a15a40
build-system/meson: Skip the 'fix-runpath' phase on armhf. 
* guix/build-system/meson.scm (lower): Remove DEFAULT-PATCHELF from inputs
on armhf.
(meson-build): Ignore the 'fix-runpath' phase when building for arm systems.
 2018-03-12 17:27:07 +01:00
Ricardo Wurmus
ad1d03fcf0
build-system: minify: Do not import (ice-9 popen) in the build environment. 
The (ice-9 popen) module should not be added to the imported-modules here,
because that depends on the Guile that is used on the host side.

* guix/build-system/minify.scm (%minify-build-system-modules): Remove import
of (ice-9 popen).
 2018-03-12 15:14:01 +01:00
Ludovic Courtès
297602513b
build-system/trivial: Add support for #:allowed-references. 
* guix/build-system/trivial.scm (lower): Add #:allowed-references and
keep it in the 'arguments' field.
(trivial-build): Add #:allowed-references.  Add
'canonicalize-reference'.  Pass #:allowed-references to
'build-expression->derivation'.
(trivial-cross-build): Likewise.
* tests/packages.scm ("trivial with #:allowed-references"): New test.
 2018-02-28 22:47:42 +01:00
Mark H Weaver
efe2a2833c
Merge branch 'master' into core-updates 2018-02-09 01:46:34 -05:00
Maxim Cournoyer
58b6812fd4
emacs-build-system: Reinstate the check phase. 
* guix/build/emacs-build-system.scm (%standard-phases): Reinstate the check
phase from the gnu-build-system.
* guix/build-system/emacs.scm (emacs-build)[tests?]: But do not enable it by default.
[parallel-tests?]: Add argument.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-02-05 16:54:27 +01:00
Danny Milosavljevic
d1a08062c6
build-system/glib-or-gtk: Don't generate 'icon-theme.cache'. 
* guix/build-system/glib-or-gtk.scm (glib-or-gtk-build): Don't generate
'icon-theme.cache'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2018-01-01 18:09:05 +01:00
Ludovic Courtès
d2b5ede053
build-system/gnu: Check whether the cross-libc has a "static" output. 
This is a followup to 614fffe427, which
broke cross-compilation to i686-w64-mingw32.

* guix/build-system/gnu.scm (standard-cross-packages): Add
"cross-libc:static" only when LIBC has a "static" output.
 2017-12-21 10:46:24 +01:00
Ludovic Courtès
614fffe427
build-system/gnu: Add the "static" output of libc in cross environments. 
Fixes a regression whereby the host libc.a would be missing when
cross-compiling.

This is a followup to commit 6dff905e51.

* guix/build-system/gnu.scm (standard-cross-packages): Add the
"cross-libc:static".
 2017-12-20 14:56:47 +01:00
Marius Bakke
32cd878be0
Merge branch 'master' into core-updates 2017-12-19 01:42:40 +01:00
Ludovic Courtès
8bc1935c7c
build-system/asdf: Use 'mlambda'. 
* guix/build-system/asdf.scm (package-with-build-system): Use 'mlambda'
instead of 'memoize'.
 2017-12-10 23:44:58 +01:00
Marius Bakke
77181815ae
Merge branch 'master' into core-updates 2017-12-05 23:41:30 +01:00
Arun Isaac
3d0aa7f70b
build-system: Add scons-build-system. 
* guix/build-system/scons.scm: New file.
* guix/build/scons-build-system.scm: New file.
* Makefile.am (MODULES): Register them.
* doc/guix.texi (Build Systems): Add scons-build-system.
 2017-11-30 18:19:31 +05:30
Marius Bakke
2dd12924cf
Merge branch 'master' into core-updates 2017-11-19 15:01:00 +01:00
Leo Famulari
d8e257113c
build-system/go: Don't let Go executables refer to the Go compiler. 
* guix/build/go-build-system.scm (remove-store-reference, remove-go-references):
New procedures.
(%standard-phases): Add 'remove-go-references' phase.
* guix/build-system/go.scm (go-build): Add allow-go-reference? key.
 2017-11-17 18:25:20 -05:00
Ludovic Courtès
a864d56302
build-system/gnu: Add 'install-license-files' phase. 
Suggested by Dave Love <fx@gnu.org>.

* guix/build-system/gnu.scm (%license-file-regexp): New variable.
(gnu-build): Add #:license-file-regexp and use it.
(gnu-cross-build): Likewise.
* guix/build/gnu-build-system.scm (%license-file-regexp): New variable.
(install-license-files): New procedure.
(%standard-phases): Add it.
 2017-11-08 22:43:56 +01:00
Ricardo Wurmus
25e51b1c45
guix: Add archive support for bioconductor-uri. 
* guix/build-system/r.scm (bioconductor-uri): Also return the archive URL.
* guix/import/cran.scm (latest-bioconductor-release, fetch-description):
Adjust because bioconductor-uri now returns a list.
 2017-11-07 08:14:09 +01:00
Leo Famulari
c10851cf91
build-system/go: Parameterize installing the source code. 
* guix/build-system/go.scm (go-build): Add install-source? key.
* guix/build/go-build-system.scm (install-source): Check if
install-source? is true.
 2017-10-24 13:10:34 -04:00
Tobias Geerinckx-Rice
5713bbf157
Use HTTPS for bioconductor.org. 
* doc/guix.texi (Invoking guix import, Invoking guix refresh): Use HTTPS for
bioconductor.org URLs.
* gnu/packages/bioinformatics.scm (r-annotate, r-geneplotter, r-genefilter)
(r-deseq2, r-dexseq, r-annotationforge, r-rbgl, r-gseabase, r-category)
(r-gostats, r-shortread, r-biocgenerics, r-biocinstaller, r-biocviews)
(r-biocstyle, r-bioccheck, r-s4vectors, r-iranges, r-genomeinfodbdata)
(r-genomeinfodb, r-xvector, r-genomicranges, r-biobase, r-annotationdbi)
(r-biomart, r-biocparallel, r-biostrings, r-rsamtools, r-delayedarray)
(r-summarizedexperiment, r-genomicalignments, r-rtracklayer)
(r-genomicfeatures, r-graph, r-topgo, r-bsgenome, r-impute, r-seqpattern)
(r-seqlogo, r-motifrg, r-bamsignals, r-mutationalpatterns, r-tximport)
(r-rhdf5, r-chipseq, r-sva, r-affy, r-vsn, r-mzid, r-msnid)
(r-interactivedisplaybase, r-annotationhub)[home-page]: Likewise.
* gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene)
(r-go-db, r-bsgenome-hsapiens-1000genomes-hs37d5, r-org-hs-eg-db)
(r-org-ce-eg-db, r-org-dm-eg-db, r-org-mm-eg-db)
(r-bsgenome-hsapiens-ucsc-hg19, r-bsgenome-mmusculus-ucsc-mm9)
(r-bsgenome-mmusculus-ucsc-mm10, r-txdb-mmusculus-ucsc-mm10-knowngene)
(r-bsgenome-celegans-ucsc-ce6, r-bsgenome-celegans-ucsc-ce10)
(r-bsgenome-dmelanogaster-ucsc-dm3, r-copyhelper)[source, home-page]:
Likewise.
* gnu/packages/statistics.scm (r-rcurl)[source]: Likewise.
* guix/build-system/r.scm (bioconductor-uri): Likewise.
* guix/import/cran.scm (%cran-url, bioconductor-package?)
(bioconductor-data-package?, bioconductor-experiment-package?): Likewise.
 2017-10-21 17:43:40 +02:00
Leo Famulari
91525b486c
build: Add the Go build system. 
* guix/build-system/go.scm,
guix/build/go-build-system.scm: New files.
* Makefile.am (MODULES): Add new files.
* doc/guix.texi (Build Systems): Document the go-build-system.
 2017-10-12 21:22:40 -04:00
Julien Lepiller
f403d7abdf
guix: ant-build-system: Add #:test-include and #:test-exclude arguments. 
* guix/build-system/ant.scm: Add #:test-include and #:test-exclude
arguments.
* guix/build/ant-build-system.scm: Generate test list from arguments.
* doc/guix.texi (Build Systems): Document it.
 2017-10-03 21:38:23 +02:00
Julien Lepiller
8df1faa047
guix: ant-build-system: Add main-class support. 
* guix/build-system/ant.scm: New #:main-class argument
* guix/build/ant-build-system.scm: Generate a manifest file with
additional properties.
* doc/guix.texi (Build Systems): Document it.
 2017-10-03 21:37:47 +02:00
Mohammed Sadiq
ea1cd554cc
build-system: meson: Fix typo in variable name. 
* guix/build-system/meson.scm (lower): fix typo in glib-or-gtk?.
 2017-09-26 19:58:26 +02:00
Peter Mikkelsen
07c101e221
build-system: Add 'meson-build-system'. 
* Makefile.am (MODULES): Add 'guix/build-system/meson.scm' and
'guix/build/meson-build-system.scm'.
* guix/build-system/meson.scm: New file.
* guix/build/meson-build-system.scm: New file.
* doc/guix.texi (Build Systems): Add 'meson-build-system'.

Signed-off-by: Ludovic Courtès <ludo@gnu.org>
 2017-09-16 18:07:00 +02:00
Mark H Weaver
f167595ba1
Merge branch 'master' into core-updates 2017-08-06 00:23:20 -04:00
Ricardo Wurmus
88c8f247e5
build: Add minify build system. 
* guix/build-system/minify.scm: New file.
* guix/build/minify-build-system: New file.
* Makefile.am (MODULES): Add new files.
* doc/guix.texi (Build Systems): Document minify-build-system.
 2017-08-04 11:23:52 +02:00
Leo Famulari
c8eb2b8c60
Merge branch 'master' into core-updates 2017-07-10 14:37:53 -04:00
Ricardo Wurmus
bb3b35975c
build-system: texlive: Build union in configure phase. 
This allows us to use texmf.cnf instead of having to set all required
environment variables manually.

* guix/build/texlive-build-system.scm (configure): New procedure.
(build): Simplify.
(%standard-phases): Add configure phase.
* guix/build-system/texlive.scm (texlive-build): Include (guix build union) in
modules.
(%texlive-build-system-modules): Likewise.
 2017-07-09 17:07:27 +02:00
Mark H Weaver
ed068b960e
Merge branch 'master' into core-updates 2017-06-26 00:00:58 -04:00
Arun Isaac
148585c240
gnu: Move contents of zip module into compression module. 
* gnu/packages/zip.scm (zip, unzip, zziplib, perl-zip): Move to...
* gnu/packages/compression.scm: ...here.
* gnu/packages/zip.scm: Delete file.
* gnu/local.mk (GNU_SYSTEM_MODULES): Unregister deleted file.
* po/packages/POTFILES.in: Unregister deleted file.
* gnu/packages/{audio, avr, bioinformatics, busybox, cdrom, ci, compression,
docbook, documentation, fonts, fpga, game-development, games, gl, gnome,
gnuzilla, graphics, guile, haskell, image, java, kodi, ldc, libreoffice,
markup, maths, mc, monitoring, music, php, pretty-print, python, scheme,
smalltalk, statistics, synergy, tex, textutils, video, web-browsers, xml,
zip}.scm, guix/build-system/{ant, font}.scm, guix/{download, packages}.scm:
Adapt module import.
 2017-06-20 18:10:35 +05:30
Mark H Weaver
9815739e9b
Merge branch 'master' into core-updates 2017-06-20 00:25:59 -04:00
Ricardo Wurmus
00f037ca44
build-system/texlive: Update to texlive-2017.1, revision 44591. 
* guix/build-system/texlive.scm (%texlive-tag): Change to texlive-2017.1.
(%texlive-revision): Change to 44591.
 2017-06-19 08:22:04 +02:00
Mark H Weaver
9d4385634d
Merge branch 'master' into core-updates 2017-06-18 02:36:51 -04:00
Ricardo Wurmus
205794c868
build-system: Add 'texlive-build-system'. 
* guix/build-system/texlive.scm: New file.
* guix/build/texlive-build-system.scm: New file.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build Systems): Document it.
* gnu/packages/tex.scm (%texlive-tag, %texlive-revision): Remove variables.
(texlife-ref): Remove procedure.
 2017-06-15 17:03:16 +02:00
Marius Bakke
ea45e2c500
Merge branch 'master' into core-updates 2017-06-10 02:57:50 +02:00
Maxim Cournoyer
df34f47894
build-system: emacs: Factorize include/exclude default arguments. 
The `install' phase of the emacs-build-system contained default arguments
duplicated from the host side `emacs-build' procedure. This change factorizes
them so that:

1. They are not duplicated.
2. They can be reused and extended easily when defining emacs packages.

* guix/build/emacs-build-system.scm (%default-include, %default-exclude): New
  variables.
(install): Use %default-include and %default-exclude as default arguments.
* guix/build-system/emacs.scm: Use and re-export %default-include,
%default-exclude from (guix build emacs-build-system).
(emacs-build): Use %default-include and %default-exclude as default arguments.

Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
 2017-06-08 19:45:27 +05:30
Marius Bakke
d0c45d2d82
Merge branch 'master' into core-updates 
Conflicts:
	gnu/packages/image.scm
        (incorporated libtiff graft)
 2017-06-03 17:51:21 +02:00
Ricardo Wurmus
d2ac5e2975
build-system/cmake: Add support for cross compilation. 
Fixes <https://bugs.gnu.org/26897>.

* guix/build-system/gnu.scm: Export standard-cross-packages.
* guix/build-system/cmake.scm (cmake-cross-build): New procedure.
(lower): Add support for cross-builds.
* guix/build/cmake-build-system.scm (configure): Handle "target" argument.
 2017-05-30 16:52:55 +02:00
Arun Isaac
3d90fa982b
build-system: Add 'font-build-system'. 
* Makefile.am (MODULES): Add 'guix/build-system/font.scm' and
  'guix/build/font-build-system.scm'.
* guix/build-system/font.scm: New file.
* guix/build/font-build-system.scm: New file.
* doc/guix.texi (Build Systems): Add 'font-build-system'.
 2017-05-28 19:30:05 +05:30
Ricardo Wurmus
3a62dd6b22
build-system: gnu: Fix cross-gcc call. 
This is a follow-up to 7b3318e34f.

* guix/build-system/gnu.scm (standard-cross-packages): Use keyword arguments
in cross-gcc call.
 2017-05-25 17:02:08 +02:00
Arun Isaac
d879685176
build-system: emacs: Install only a subset of files. 
* guix/build/emacs-build-system.scm (install): Install files matching
  #:include while excluding files matching #:exclude.
* guix/build-system/emacs.scm (emacs-build): Add keyword arguments #:include
  and #:exclude.
 2017-05-23 06:12:43 +05:30
Andy Patterson
0383afa02a
build-system/asdf: Handle tests defined in external systems. 
* guix/build-system/asdf.scm (asdf-build): Add a #:test-asd-file argument.
[builder]: Pass it to the build system.
(package-with-build-system)[transform]: Strip it from source systems' arguments.
* guix/build/asdf-build-system.scm (check): Pass the fully qualified path to
it on to the test-system procedure.
* guix/build/lisp-utils.scm (test-system): Load the file, or otherwise one of
the often used names for it, before running the tests.  Adjust the docstring
accordingly.
 2017-05-16 15:18:16 +02:00
Andy Patterson
0186a463d0
build-system/asdf: Always pre-load the system's definition file. 
* guix/build-system/asdf.scm (asdf-build)[builder]: Pass a default
`#:asd-file' argument to the build procedure, using the system's name.
* guix/build/asdf-build-system.scm (build, check): Adjust to assume that
`asd-file' will always be a string.
* guix/build/lisp-utils.scm (compile-system, system-dependencies)
(test-system): Likewise.
 2017-05-16 15:18:15 +02:00
Andy Patterson
457702b1d9
build-system/asdf: Pass the system name as an argument to the builder. 
* guix/build-system/asdf.scm (asdf-build): Use the user-defined system name,
or calculate it from the package's full name.
[builder]: Pass the value along to the build procedure.
(package-with-build-system): Remove #:asd-system-name from source packages'
arguments.
* guix/build/asdf-build-system.scm: Adjust accordingly.
* guix/build/lisp-utils.scm (remove-lisp-from-name): Delete variable.
 2017-05-16 15:18:15 +02:00
Andy Patterson
b4c9f0c50d
build-system/asdf: Parameterize the lisp type and implementation globally. 
* guix/build-system/asdf.scm (asdf-build)[builder]: Parameterize %lisp-type
and %lisp before invoking the build procedure. Don't pass #:lisp-type as an
argument to said procedure.
* guix/build/asdf-build-system.scm: Adjust accordingly.
(source-install-prefix): Rename to %lisp-source-install-prefix.
* guix/build/lisp-utils.scm: Adjust accordingly.
(%lisp-type): New parameter.
(bundle-install-prefix): Rename to %bundle-install-prefix.
* gnu/packages/lisp.scm: Adjust accordingly.
 2017-05-16 15:18:15 +02:00
Andy Patterson
6de91ba2a1
build-system/asdf: Make #:lisp a package argument. 
* guix/build-system/asdf.scm (lower): Change argument name to `lisp-type'.
(asdf-build): Change argument name to `lisp-type'.  Remove `lisp' as an
argument to the returned procedure.  Change the argument passed to build
phases to `lisp-type'.
* guix/build/asdf-build-system.scm (copy-source, build, check)
(create-asd-file, symlink-asd-files, cleanup-files, strip): Respect
`lisp-type` argument.
* gnu/packages/lisp.scm (sbcl-stumpwm, sbcl-stumpwm+slynk): Likewise.
 2017-05-16 15:18:15 +02:00
Andy Patterson
0e1371be09
build-system/asdf: Don't rename inputs. 
* guix/build-system/asdf.scm (package-with-build-system)[transform]: Use updated
`new-inputs' procedure for inputs and native-inputs.
<rewrite>: Don't rename inputs.
<new-propagated-inputs>: Draw from package-inputs and package-native-inputs
for source packages.  Use the original package's propagated-inputs otherwise.
<new-inputs>: Convert into a function to be used to transform inputs and
native-inputs.
* gnu/packages/lisp.scm (sbcl-fiveam, sbcl-bordeaux-threads)
(sbcl-flexi-streams, sbcl-cl-ppcre, sbcl-stumpwm, sbcl-slynk-arglists)
(sbcl-slynk-fancy-inspector): Don't prefix input names.
 2017-05-16 15:18:14 +02:00
Andy Patterson
35189728cd
build-system/asdf: Use asdf to determine dependencies. 
This removes the need for conventions to determine which inputs are run-time
dependencies, and also the need to specify "special" dependencies.

* guix/build/lisp-utils.scm (patch-asd-file, lisp-dependencies)
(wrap-perform-method): Remove them.
(inputs->asd-file-map, system-dependencies, generate-system-definition)
(generate-dependency-links, make-asd-file): New procedures.
(lisp-eval-program): Add an error if no lisp matches.
(compile-system): Don't use asdf's in-built asd-file generator.
 2017-05-16 15:18:14 +02:00
Ben Woodcroft
c6cfec42b0
build-system: Add package-with-ocaml4.01. 
* guix/build-system/ocaml.scm (default-ocaml4.01, default-ocaml4.01-findlib,
package-with-explicit-ocaml, package-with-ocaml4.01,
strip-ocaml4.01-variant): New variables.
 2017-05-10 22:13:54 +02:00
Hartmut Goebel
59135f0d7e
guix: Add java-utils. 
* guix/build/java-utils.scm: New file.
* guix/build-system/ant.scm: Use it.
* Makefile.am (MODULES): Add it.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-05-10 17:59:22 +02:00
Ricardo Wurmus
52a791f50f
ant-build-system: Add default "check" target. 
* guix/build-system/ant.scm (ant-build): Change default test target to
"check"; add "test-dir" argument.
* guix/build/ant-build-system.scm (default-build.xml): Add "test-dir"
argument; add ant targets "compile-tests" and "check".
(configure): Add "test-dir" argument; pass it to "default-build.xml".
 2017-05-10 17:59:22 +02:00
Hartmut Goebel
8df64f7384
ant-build-system: Allow specifying source directory. 
* guix/build-system/ant.scm (ant-build),
guix/build/ant-build-system.scm (default-build.xml): Add parameter
source-dir.
* guix/build/ant-build-system.scm (configure): Pass source-dir on to
default-build.xml.
* doc/guix.texi (Build Systems): Document it.

Co-authored-by: Ricardo Wurmus <rekado@elephly.net>
 2017-05-10 17:59:22 +02:00
Ludovic Courtès
1618006d0b
build-system/python: 'package-with-explicit-python' uses 'package-mapping'. 
* guix/build-system/python.scm (package-with-explicit-python)
[package-variant, cut?]: New procedures.
[transform]: Remove 'mlambdaq' form and input tuple handling.
Use 'package-mapping'.
 2017-04-05 22:45:41 +02:00
Danny Milosavljevic
25fb58a3be
build-system/cargo (cargo-build): Add cargo-build-flags, remove configure-flags. 
* guix/build-system/cargo.scm (cargo-build): Add cargo-build-flags,
remove configure-flags.
 2017-03-17 16:48:08 +01:00
Ricardo Wurmus
2d7c4ae3ee
gnu: r: Rename to r-minimal. 
* gnu/packages/statistics.scm (r): Rename to...
(r-minimal): ...this new variable.
(r-with-recommended-packages): Rename to...
(r): ...this.
* guix/build-system/r.scm (default-r): Reference r-minimal.
* gnu/packages/emacs.scm (emacs-ess)[inputs],
gnu/packages/machine-learning.scm (shogun)[inputs],
gnu/packages/python.scm (python-rpy2)[inputs],
gnu/packages/bioinformatics.scm (ribotaper)[inputs],
(couger)[propagated-inputs],
(roary)[inputs],
(rsem)[inputs],
(rcas-web)[inputs]: Change "r" to "r-minimal".
 2017-03-17 10:14:02 +01:00
Danny Milosavljevic
7109e0fff8
build-system/cargo: Export %cargo-build-system-modules. 
* guix/build-system/cargo.scm (%cargo-build-system-modules): Export.
 2017-03-03 12:06:11 +01:00
Danny Milosavljevic
65e862d1a2
gnu: Add dub-build-system. 
* guix/build-system/dub.scm: New file.
* guix/build/dub-build-system.scm: New file.
* Makefile.am (MODULES): Add them.
* doc/guix.texi: Add section for dub-build-system.
 2017-02-10 16:21:50 +01:00
Ludovic Courtès
86a6ff4bb0
build-system/python: 'package-with-explicit-python' uses 'eq?' memoization. 
* guix/build-system/python.scm (package-with-explicit-python): Use
'mlambdaq' instead of 'mlambda'.  This does not change the <package>
graph and has no visible impact on performance.
 2017-01-28 18:55:20 +01:00
Ludovic Courtès
55b2d92145
Use 'mlambda' instead of 'memoize'. 
* gnu/packages.scm (find-newest-available-packages): Use 'mlambda'
instead of (memoize (lambda ...) ...).
* gnu/packages/bootstrap.scm (package-with-bootstrap-guile): Likewise.
* guix/build-system/gnu.scm (package-with-explicit-inputs)[rewritten-input]:
Likewise.
* guix/build-system/python.scm (package-with-explicit-python)[transform]:
Likewise.
* guix/derivations.scm (derivation->string): Likewise.
* guix/gnu-maintenance.scm (gnu-package?): Likewise.
* guix/modules.scm (module-file-dependencies): Likewise.
* guix/scripts/graph.scm (standard-package-set): Likewise.
* guix/scripts/lint.scm (official-gnu-packages*): Likewise.
* guix/store.scm (store-regexp*): Likewise.
* guix/utils.scm (location): Likewise.
 2017-01-28 18:55:20 +01:00
Ludovic Courtès
f9704f179a
Add (guix memoization). 
* guix/combinators.scm (memoize): Remove.
* guix/memoization.scm: New file.
* Makefile.am (MODULES): Add it.
* gnu/packages.scm, gnu/packages/bootstrap.scm,
guix/build-system/gnu.scm, guix/build-system/python.scm,
guix/derivations.scm, guix/gnu-maintenance.scm,
guix/import/cran.scm, guix/import/elpa.scm,
guix/modules.scm, guix/scripts/build.scm,
guix/scripts/graph.scm, guix/scripts/lint.scm,
guix/store.scm, guix/utils.scm: Adjust imports accordingly.
 2017-01-28 18:55:20 +01:00
Julien Lepiller
e6876cb9dc
gnu: Add ocaml-build-system. 
* guix/build/ocaml-build-system.scm: New file.
* guix/build-system/ocaml.scm: New file.
* Makefile.am (MODULES): Add them.
* gnu/packages/ocaml.scm (ocaml)[native-search-paths]: Adjuste OCAMLPATH.

Signed-off-by: David Craven <david@craven.ch>
 2017-01-04 16:03:39 +01:00
David Craven
3b7ccbe94c
build-system: cargo: Use correct cargo. 
* gnu/packages/rust.scm (cargo-bootstrap): Make private.
* guix/build-system/cargo.scm (default-cargo): Use cargo.
 2017-01-04 11:29:15 +01:00
David Craven
f1d136957d
build-system: cargo: Handle Cargo.lock file not present. 
* guix/build-system/cargo.scm (cargo-build): Add src output.
  (private-keywords): Add #:outputs.
* guix/build/cargo-build-system.scm (configure): Use /share/rust-source
  when replacing inputs.
  (build, check): Don't do anything when there isn't a Cargo.lock file
  present.
  (install): Install sources to src output. When a Cargo.lock file is
  present use cargo install to install binaries to out.
* guix/import/crate.scm (make-crate-sexp): Importer uses the src output
  for crate inputs by default.
* guix/import/utils.scm (package-names->package-inputs, maybe-inputs,
  maybe-native-inputs): Take an optional output argument.
* tests/crate.scm (crate->guix-package test): Update.

Problem reported by Francisco Gómez García <espectalll@kydara.com>.
 2017-01-01 18:20:52 +01:00
David Craven
4b3cb7f4bc
build-system: Add cargo build system. 
* guix/build-system/cargo.scm: New file.
* guix/build/cargo-build-system.scm: New file.
* Makefile.am (MODULES): Add files.
 2016-12-14 16:30:42 +01:00
Hartmut Goebel
5f7565d190
guix: python-build-system: Add option "#:use-setuptools?" (default true). 
* guix/build-system/python.scm (python-build): New keyword argument
  "#:use-setuptools?", defaulting to #t.
* guix/build/python-build-system.scm (call-setup-py): New positional
  parameter "use-setuptools?". If false, do not use the shim-wrapper
  for addin setuptools. (build, check): accept keyword-
  parameter, and pass to call-setuppy. (install): same; if
  "use-setuptools?" is false, do not use options "--root" and
  "--single-version-externally-managed" for setup.py.
* doc/guix.texi (Build Systems): Document it.
 2016-11-15 17:37:44 +01:00
Andy Patterson
a1b30f99a8
build-system: Add asdf-build-system. 
* guix/build-system/asdf.scm: New file.
* guix/build/asdf-build-system.scm: New file.
* guix/build/lisp-utils.scm: New file.
* Makefile.am (MODULES): Add them.
* doc/guix.texi (Build Systems): Document 'asdf-build-system'.

Signed-off-by: 宋文武 <iyzsong@gmail.com>
 2016-10-08 21:20:35 +08:00
Ludovic Courtès
3c185b24f5
Add missing exports. 
Reported by Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
at <https://lists.gnu.org/archive/html/guix-devel/2016-09/msg01686.html>.

* gnu/system/file-systems.scm (%tty-gid): Export.
* guix/build-system/python.scm (default-python, default-python2):
Export.
 2016-09-27 11:22:56 +02:00
Leo Famulari
59c3e98474
ant-build-system: Fix typo. 
* guix/build-system/ant.scm (ant-build): Fix typo.
 2016-08-16 14:05:14 -04:00
宋文武
8ea8e8d3c3
guix: python-build-system: Change pypi-uri to use https://pypi.io. 
* guix/build-system/python.scm (pypi-uri): Use https://pypi.io.
* gnu/packages/python.scm (python-twisted)[uri]: Remove https://pypi.io.
 2016-06-25 20:49:59 +08:00
Alex Kost
a6eafbed66
build-system/emacs: Use 'emacs-minimal' by default. 
* guix/build-system/emacs.scm (default-emacs): Use 'emacs-minimal'.
* gnu/packages/emacs.scm (emacs-auctex): Use 'emacs'.
 2016-05-24 11:32:27 +03:00
Ludovic Courtès
958dd3ce68
utils: Move combinators to (guix combinators). 
* guix/utils.scm (compile-time-value, memoize, fold2)
(fold-tree, fold-tree-leaves): Move to...
* guix/combinators: ... here.  New file.
* tests/utils.scm ("fold2, 1 list", "fold2, 2 lists")
(fold-tree tests): Move to...
* tests/combinators.scm: ... here.  New file.
* Makefile.am (MODULES, SCM_TESTS): Add them.
* gnu/packages.scm, gnu/packages/bootstrap.scm,
gnu/services/herd.scm, guix/build-system/gnu.scm,
guix/build-system/python.scm, guix/derivations.scm,
guix/gnu-maintenance.scm, guix/import/elpa.scm,
guix/scripts/archive.scm, guix/scripts/build.scm,
guix/scripts/graph.scm, guix/scripts/lint.scm,
guix/scripts/size.scm, guix/scripts/substitute.scm,
guix/serialization.scm, guix/store.scm, guix/ui.scm: Adjust imports
accordingly.
 2016-05-04 23:35:55 +02:00
Ricardo Wurmus
ab50bba9f6 build-system/ant: Add zip. 
* guix/build-system/ant.scm (default-zip): New variable.
(lower): Add zip to native inputs.
 2016-03-31 15:47:32 +02:00
Ricardo Wurmus
cb6ce89e21 build-system/r: Support "substitutable?" flag. 
* guix/build-system/r.scm (r-build): Support the "substitutable?" flag.
 2016-03-31 15:47:19 +02:00
Ludovic Courtès
55e1f25d89 build-system/gnu: Add #:disallowed-references. 
* guix/build-system/gnu.scm (gnu-build): Add #:disallowed-references and
honor it.
(gnu-cross-build): Likewise.
 2016-03-20 22:46:45 +01:00
Ricardo Wurmus
5f7a1a4def build: Add Ant build system. 
* guix/build-system/ant.scm: New file.
* guix/build/ant-build-system: New file.
* Makefile.am (MODULES): Add new files.
* doc/guix.texi (Build Systems): Document ant-build-system.
 2016-03-14 12:36:49 +01:00
Ludovic Courtès
1be83341f6 build-system/python: Honor the 'python2-variant' property of packages. 
Fixes <http://bugs.gnu.org/22437>.
Reported by Leo Famulari <leo@famulari.name> and others.

* guix/build-system/python.scm (package-with-explicit-python): Add
  #:variant-property and honor it.
(strip-python2-variant): New procedure.
 2016-02-07 23:46:01 +01:00
Ludovic Courtès
f0907d97d4 build-system/python: Use 'ensure-keyword-arguments'. 
* guix/build-system/python.scm (package-with-explicit-python): Use
'ensure-keyword-arguments'.
 2016-02-01 08:59:13 +01:00
Ludovic Courtès
8c986ab120 Merge branch 'master' into core-updates 2016-01-13 18:18:48 +01:00
Ludovic Courtès
b8a35309f8 build-system/gnu: 'dist-package' can be passed the phases. 
* guix/build-system/gnu.scm (dist-package): Add #:phases parameter and
honor it.
 2016-01-13 17:43:21 +01:00
Ludovic Courtès
17ad0a2714 build-system/python: 'pypi-uri' takes an optional file name extension. 
Suggested by swedebugia <swedebugia@riseup.net>.

* guix/build-system/python.scm (pypi-uri): Add 'extension' parameter and
use it.
 2016-01-08 19:06:26 +01:00
Ludovic Courtès
d4aaf95401 build-system/gnu: Make 'package-with-explicit-inputs' idempotent. 
* guix/build-system/gnu.scm (package-with-explicit-inputs): Use
  'ensure-keyword-arguments' instead of appending to ARGS.
* gnu/packages/commencement.scm (static-bash-for-glibc): Add missing
  #:guile argument.
 2016-01-06 23:08:22 +01:00
Ludovic Courtès
53334dd6e9 Merge branch 'master' into core-updates 2016-01-03 14:53:03 +01:00
Ludovic Courtès
7165a91c7d build-system/gnu: Use the long option name for deterministic archives. 
This is a followup to 3eb34c6.

* guix/build-system/gnu.scm (gnu-build, gnu-cross-build): Use
"--enable-deterministic-archives" instead of "-D" to work around
Binutils bug <https://sourceware.org/bugzilla/show_bug.cgi?id=17671>.
* guix/build/gnu-build-system.scm (strip): Likewise.
 2016-01-01 00:49:05 +01:00
Ricardo Wurmus
12d38e8d43 build: Add bioconductor-uri procedure. 
* guix/build-system/r.scm (bioconductor-uri): New procedure.
 2015-12-21 22:32:01 +01:00
Ludovic Courtès
3eb34c631a build-system/gnu: Always pass "-D" to strip/objcopy. 
* guix/build-system/gnu.scm (gnu-build, gnu-cross-build): Add "-D" to
  #:strip-flags.
* guix/build/gnu-build-system.scm (strip): Likewise.  Also pass "-D" to
  OBJCOPY-COMMAND.
 2015-12-18 23:58:51 +01:00
Ludovic Courtès
f856fcb558 build-system/python: 'package-with-python2' preserves source location. 
* guix/build-system/python.scm (package-with-explicit-python): Add
  'location' field.
 2015-11-04 00:12:20 +01:00
Cyril Roelandt
3009334e3b guix: Add a "pypi-uri" helper method. 
* guix/download.scm (mirrors): New "pypi" mirror.
* guix/build-system/python.scm (pypi-uri): New method.
 2015-11-03 21:38:13 +01:00
Ludovic Courtès
87cd0dba2f build-system/gnu: dist-package: Use 'autoconf-wrapper'. 
* guix/build-system/gnu.scm (dist-package): Use AUTOCONF-WRAPPER instead
  of AUTOCONF.
 2015-10-14 21:39:05 +02:00
Ludovic Courtès
b3e2a5af9f build-system/python: Memoize the results of 'package-with-python2'. 
Fixes <http://bugs.gnu.org/21675>.
Reported by Cyril Roelandt <tipecaml@gmail.com>.

Before this change, the command:

  guix build python2-oslo.utils -n --no-substitutes

would take 17.5s.  After, it is down to 2.9s.
Likewise, the command:

  guix graph python2-bandit | grep python2-setuptools.*Helve| wc -l

would return 412 nodes before, all functionally equivalent, and returns
a single one now.

* guix/build-system/python.scm (package-with-explicit-python): Remove
  'p' parameter.  Change to return a one-argument memoizing procedure.
  (package-with-python2): Adjust accordingly.
 2015-10-13 00:06:11 +02:00
Ludovic Courtès
afd3d9316c Use "normalized codesets" everywhere. 
In other words, change "xx_YY.UTF-8" to "xx_YY.utf8".

* guix/profiles.scm (ca-certificate-bundle): Use "en_US.utf8" instead of
  "en_US.UTF-8".
* guix/packages.scm (patch-and-repack): Likewise.
* guix/build/gnu-build-system.scm (install-locale): Likewise.
* guix/build-system/gnu.scm (gnu-build, gnu-cross-build): Likewise.
* gnu/packages/python.scm (python-ipython): Likewise.
* gnu/packages/gawk.scm (gawk): Likewise.
* build-aux/hydra/demo-os.scm: Likewise.
* gnu/packages/guile.scm (guile-ncurses)[arguments]: Remove
  'change-locale' phase.
 2015-10-04 00:10:03 +02:00
Mark H Weaver
bd90127ad4 Merge branch 'master' into core-updates 2015-09-22 16:38:48 -04:00
Ricardo Wurmus
5546114e73 build: Add cran-uri procedure. 
* guix/build-system/r.scm (cran-uri): New procedure.
 2015-09-21 10:48:26 +02:00
Ludovic Courtès
75710da667 Merge branch 'master' into core-updates 2015-09-13 21:28:01 +02:00
宋文武
f47fbeb23a build-system/glib-or-gtk: Don't generate 'icon-theme.cache'. 
* guix/build-system/glib-or-gtk.scm (default-gtk+): Remove.
  (lower): Adjust accordingly.
* guix/build/glib-or-gtk-build-system.scm (generate-icon-cache): Remove.
  (%standard-phases): Remove 'glib-or-gtk-icon-cache' phase.
 2015-09-11 20:24:30 +08:00
Ricardo Wurmus
f8f3bef6aa build: Add R build system. 
* guix/build-system/r.scm: New file.
* guix/build/r-build-system: New file.
* Makefile.am (MODULES): Add new files.
* doc/guix.texi (Build Systems): Document r-build-system.
 2015-08-31 15:39:34 +02:00
David Thompson
e83c6d009f build: ruby: Rewrite build system to use gem archives. 
Co-Authored-By: Pjotr Prins <pjotr.public01@thebird.nl>

* guix/build-system/ruby.scm (lower): Remove git dependency.
  (rubygems-uri): New procedure.
* guix/build/ruby-build-system (gitify): Delete.
  (unpack): Use 'gem unpack' utility.
  (check): Add docstring.
  (build): Repack modified gem.
  (install): Rebuild unpacked gem and install it.
  (%standard-phases): Remove gitify and build phases.
* gnu/packages/ruby.scm (ruby-hoe, ruby-rake-compiler, ruby-i18n,
  ruby-rspec-support, ruby-rspec-core, ruby-diff-lcs-for-rspec,
  ruby-rspec-expectations, ruby-rspec-mocks, ruby-rspec, bundler,
  ruby-useragent, ruby-bacon, ruby-arel, ruby-connection-pool,
  ruby-net-http-persistent, ruby-minitest, ruby-minitest-sprint,
  ruby-minitest-bacon, ruby-daemons, ruby-git, ruby-slop,
  ruby-multipart-post): Convert to new build system.
* doc/guix.texi (ruby-build-system): Document the gem archive requirement.
 2015-08-18 17:58:13 -04:00
Mark H Weaver
1b4e48d498 Merge branch 'master' into core-updates 2015-07-19 18:12:34 -04:00