gnu: fastahack: Build and install shared library and headers.
* gnu/packages/bioinformatics.scm (fastahack)[arguments]: Add phase to build PIE objects. Add custom phase to build dynamic library. Adjust custom 'install phase to install shared library and headers.
This commit is contained in:
parent
5c78997188
commit
f075bf09bd
@ -15582,10 +15582,28 @@ neural networks.")
|
||||
#:phases
|
||||
(modify-phases %standard-phases
|
||||
(delete 'configure) ; There is no configure phase.
|
||||
(add-after 'unpack 'patch-source
|
||||
(lambda _
|
||||
(substitute* "Makefile"
|
||||
(("-c ") "-c -fPIC "))
|
||||
#t))
|
||||
(add-after 'build 'build-dynamic
|
||||
(lambda _
|
||||
(invoke "g++"
|
||||
"-shared" "-o" "libfastahack.so"
|
||||
"Fasta.o" "FastaHack.o" "split.o" "disorder.o")))
|
||||
(replace 'install
|
||||
(lambda* (#:key outputs #:allow-other-keys)
|
||||
(let ((bin (string-append (assoc-ref outputs "out") "/bin")))
|
||||
(install-file "fastahack" bin))
|
||||
(let* ((out (assoc-ref outputs "out"))
|
||||
(lib (string-append out "/lib"))
|
||||
(bin (string-append out "/bin")))
|
||||
(mkdir-p (string-append out "/include/fastahack"))
|
||||
(for-each
|
||||
(lambda (file)
|
||||
(install-file file (string-append out "/include/fastahack")))
|
||||
(find-files "." "\\.h$"))
|
||||
(install-file "fastahack" bin)
|
||||
(install-file "libfastahack.so" lib))
|
||||
#t)))))
|
||||
(home-page "https://github.com/ekg/fastahack")
|
||||
(synopsis "Indexing and sequence extraction from FASTA files")
|
||||
|
Loading…
Reference in New Issue
Block a user