gnu: Add r-maxprobes.

* gnu/packages/bioinformatics.scm (r-maxprobes): New variable.
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Ricardo Wurmus 2023-03-30 14:40:01 +02:00
parent 033955b4e8
commit caf163536a
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@ -14156,6 +14156,32 @@ spatial single-cell expression data.")
annotation 1.0B5.")
(license license:artistic2.0))))
(define-public r-maxprobes
(let ((commit "c2120dba972e12115280ef274ff80550cee5b264")
(revision "1"))
(package
(name "r-maxprobes")
(version (git-version "0.0.2" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/markgene/maxprobes")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1kij9bds2l9mwm519bzyd2608563qjlmbrayhva1s0vgml5iq9wh"))))
(properties `((upstream-name . "maxprobes")))
(build-system r-build-system)
(propagated-inputs (list r-minfi r-minfidata))
(native-inputs (list r-knitr))
(home-page "https://github.com/markgene/maxprobes")
(synopsis "Methylation array cross-reactive probes")
(description
"The Maxprobes package collects cross-reactive probes of Illumina
methylation array 450K and EPIC/850K.")
(license license:gpl2+))))
(define-public gffread
;; We cannot use the tagged release because it is not in sync with gclib.
;; See https://github.com/gpertea/gffread/issues/26