gnu: Add r-seurat-utils.

* gnu/packages/bioinformatics.scm (r-seurat-utils): New variable.
This commit is contained in:
Navid Afkhami 2023-03-03 13:07:23 +00:00 committed by Ricardo Wurmus
parent 03ef0914d5
commit c6480edbe3
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@ -15939,6 +15939,60 @@ information... The package can also be used to extract data from @code{.loom}
files.")
(license license:expat))))
(define-public r-seurat-utils
(let ((commit "0b6f5b548a49148cfbeaa654e8a618c0a020afa5")
(revision "1"))
(package
(name "r-seurat-utils")
(version (git-version "1.6.5" revision commit))
(source (origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/vertesy/Seurat.utils")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32
"1mn64h375mkj6x4ix5493z32gqg96yc507j5jr0lx9g5wk1bf762"))))
(properties `((upstream-name . "Seurat.utils")))
(build-system r-build-system)
(propagated-inputs (list r-codeandroll2
r-cowplot
r-dplyr
r-ggcorrplot
r-ggexpress
r-ggplot2
r-ggpubr
r-ggrepel
r-hgnchelper
r-htmlwidgets
r-markdownhelpers
r-markdownreports
r-matrix
r-matrixstats
r-princurve
r-r-utils
r-readr
r-readwriter
r-reshape2
r-scales
r-seurat
r-soupx
r-sparsematrixstats
r-stringendo
r-stringr
r-tibble
r-tictoc
r-vroom))
(home-page "https://github.com/vertesy/Seurat.utils")
(synopsis "Collection of utility functions for Seurat")
(description
"This is a collection of utility functions for Seurat. These functions
allow the automation and multiplexing of plotting, 3D plotting, visualization
of statistics & QC, interaction with the Seurat object. Some functionalities
require functions from CodeAndRoll and MarkdownReports libraries.")
(license license:gpl3))))
(define-public r-seuratwrappers
;; There are no releases or tags.
(let ((commit "d28512f804d5fe05e6d68900ca9221020d52cf1d")