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gnu: r-mzr: Update to 2.22.0.

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* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.22.0.
[native-inputs]: Add r-knitr.
This commit is contained in:
Ricardo Wurmus 2020-06-13 01:13:00 +02:00
parent 6b9e3b92c4
commit 9ae4bd0b77
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1 changed files with 5 additions and 3 deletions
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gnu/packages/bioinformatics.scm
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@ -9571,14 +9571,14 @@ proteomics packages.")
(define-public r-mzr (define-public r-mzr
(package (package
(name "r-mzr") (name "r-mzr")
(version "2.20.0") (version "2.22.0")
(source (source
(origin (origin
(method url-fetch) (method url-fetch)
(uri (bioconductor-uri "mzR" version)) (uri (bioconductor-uri "mzR" version))
(sha256 (sha256
(base32 (base32
"1cwd7phlc5jbx6r6cznyfbdpvcin5fvsaasbbi65zn0s92a80r13")) "1r8j8yiz5lcan7j4h37sza2kwczl48dxvld3da3ghjjq67cdc2cm"))
(modules '((guix build utils))) (modules '((guix build utils)))
(snippet (snippet
'(begin '(begin
@ -9600,7 +9600,7 @@ proteomics packages.")
#t))))) #t)))))
(inputs (inputs
`(;; Our default boost package won't work here, unfortunately, even with `(;; Our default boost package won't work here, unfortunately, even with
;; mzR version 2.20.0. ;; mzR version 2.22.0.
("boost" ,boost-for-mysql) ; use this instead of the bundled boost sources ("boost" ,boost-for-mysql) ; use this instead of the bundled boost sources
("zlib" ,zlib))) ("zlib" ,zlib)))
(propagated-inputs (propagated-inputs
@ -9611,6 +9611,8 @@ proteomics packages.")
("r-rcpp" ,r-rcpp) ("r-rcpp" ,r-rcpp)
("r-rhdf5lib" ,r-rhdf5lib) ("r-rhdf5lib" ,r-rhdf5lib)
("r-zlibbioc" ,r-zlibbioc))) ("r-zlibbioc" ,r-zlibbioc)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/sneumann/mzR/") (home-page "https://github.com/sneumann/mzR/")
(synopsis "Parser for mass spectrometry data files") (synopsis "Parser for mass spectrometry data files")
(description (description