gnu: Add r-italics.
* gnu/packages/bioconductor.scm (r-italics): New variable.
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@ -4536,6 +4536,37 @@ domains etc.) from quantification of all types of RNASeq by tools such as
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Kallisto, Salmon, StringTie, Cufflinks/Cuffdiff etc.")
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(license license:gpl2+)))
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(define-public r-italics
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(package
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(name "r-italics")
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(version "2.58.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "ITALICS" version))
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(sha256
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(base32 "0g937h9zxkxnm424wh58b46mfasdd7pqy5c04r0a46mx9lxibgbs"))))
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(properties `((upstream-name . "ITALICS")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-affxparser
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r-dbi
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r-glad
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r-italicsdata
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r-oligo
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r-oligoclasses
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r-pd-mapping50k-xba240))
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(home-page "http://bioinfo.curie.fr")
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(synopsis "Normalizing of the Affymetrix GeneChip human mapping")
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(description
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"This package provides tools for normalizing and analyzing of GeneChip
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Mapping 100K and 500K Set. Affymetrix GeneChip Human Mapping 100K and 500K
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Set allows the DNA copy number mea- surement of respectively 2× 50K and 2×
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250K SNPs along the genome. Their high density allows a precise localization
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of genomic alterations and makes them a powerful tool for cancer and copy
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number polymorphism study.")
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(license license:gpl2)))
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;; This is a CRAN package, but it depends on r-biobase and r-limma from Bioconductor.
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(define-public r-absfiltergsea
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(package
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