gnu: methyldackel: Update to 0.6.1.
* gnu/packages/bioinformatics.scm (methyldackel): Update to 0.6.1. [arguments]: Set LIBBIGWIG variable instead of patching Makefile. [inputs]: Replace htslib-1.9 with htslib.
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@ -17844,7 +17844,7 @@ patterns.")
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(define-public methyldackel
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(package
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(name "methyldackel")
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(version "0.5.1")
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(version "0.6.1")
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(source (origin
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(method git-fetch)
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(uri (git-reference
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@ -17853,7 +17853,7 @@ patterns.")
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(file-name (git-file-name name version))
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(sha256
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(base32
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"1sfhf2ap75qxpnmy1ifgmxqs18rq8mah9mcgkby73vc6h0sw99ws"))))
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"06kj76pyhzxfcjcpm840a3km3fa9994kfq4asglnb228pwak326z"))))
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(build-system gnu-build-system)
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(arguments
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(list
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@ -17861,18 +17861,17 @@ patterns.")
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#:make-flags
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#~(list "CC=gcc"
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"CFLAGS=-fcommon"
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"LIBBIGWIG=-lBigWig"
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(string-append "prefix=" #$output "/bin/"))
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#:phases
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'(modify-phases %standard-phases
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(replace 'configure
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(lambda _
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(substitute* "Makefile"
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(("-lhts ") "-lhts -lBigWig ")
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(("install MethylDackel \\$\\(prefix\\)" match)
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(string-append "install -d $(prefix); " match))))))))
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(inputs
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(list curl ; XXX: needed by libbigwig
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htslib-1.9 libbigwig zlib))
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(list curl htslib libbigwig zlib))
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;; Needed for tests
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(native-inputs
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(list python-wrapper))
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