gnu: python-scanpy: Use GUIX_PYTHONPATH.

* gnu/packages/bioinformatics.scm (python-scanpy)[arguments]: Use GUIX_PYTHONPATH instead of PYTHONPATH.
2021-11-21 00:39:57 +01:00 · 2021-11-21 00:39:57 +01:00 · 664721422c
commit 664721422c
parent a22fb2d164
1 changed files with 2 additions and 2 deletions
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@ -11956,10 +11956,10 @@ implementation differs in these ways:
               ;; packaged yet.
               (delete-file "scanpy/tests/external/test_scanorama_integrate.py")

-               (setenv "PYTHONPATH"
+               (setenv "GUIX_PYTHONPATH"
                       (string-append (getcwd) ":"
                                      (assoc-ref inputs "python-anndata:source") ":"
-                                      (getenv "PYTHONPATH")))
+                                      (getenv "GUIX_PYTHONPATH")))
               (invoke "pytest" "-vv"
                       "-k"
                       ;; Plot tests that fail.