gnu: Add r-chromvarmotifs.
* gnu/packages/bioconductor.scm (r-chromvarmotifs): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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@ -1183,6 +1183,34 @@ biscuiteer.")
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chromstaR package.")
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chromstaR package.")
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(license license:gpl3)))
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(license license:gpl3)))
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(define-public r-chromvarmotifs
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(let ((commit "38bed559c1f4770b6c91c80bf3f8ea965da26076")
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(revision "1"))
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(package
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(name "r-chromvarmotifs")
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(version (git-version "0.2.0" revision commit))
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(source
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(origin
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(method git-fetch)
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(uri (git-reference
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(url "https://github.com/GreenleafLab/chromVARmotifs")
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(commit commit)))
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(file-name (git-file-name name version))
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(sha256
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(base32 "0i9v1m1hrg1lkd2pnkj5nnrpks6vhhhpbdhsfl2lmjak4npxxr5q"))))
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(properties `((upstream-name . "chromVARmotifs")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-tfbstools" ,r-tfbstools)))
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(home-page "https://github.com/GreenleafLab/chromVARmotifs")
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(synopsis "Stores motif collections for use with motifmatchr or chromVAR")
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(description
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"This package stores motif collections as lists of @dfn{position
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frequency matrix} (PWMatrixList) objects provided by the @code{TFBSTools}
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package for use in R with packages like @code{motifmatchr} or
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@code{chromVAR}.")
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(license license:expat))))
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(define-public r-copyhelper
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(define-public r-copyhelper
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(package
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(package
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(name "r-copyhelper")
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(name "r-copyhelper")
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