gnu: Add r-phyclust.

* gnu/packages/cran.scm (r-phyclust): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
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Mădălin Ionel Patrașcu 2022-07-28 23:38:58 +02:00 committed by Ricardo Wurmus
parent 1085514a18
commit 5baa37b56c
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@ -11699,6 +11699,31 @@ supplied Jacobian, for specifying a banded numerical Jacobian and for allowing a
singular or ill-conditioned Jacobian.")
(license license:gpl2+)))
(define-public r-phyclust
(package
(name "r-phyclust")
(version "0.1-30")
(source (origin
(method url-fetch)
(uri (cran-uri "phyclust" version))
(sha256
(base32
"0fy9q95vmlm9idpax7alhpfwn30gflnc9md72g91jypyxkx5nr7p"))))
(properties `((upstream-name . "phyclust")))
(build-system r-build-system)
(propagated-inputs (list r-ape))
(home-page "https://snoweye.github.io/phyclust/")
(synopsis "Studying phyloclustering and exploring DNA sequence data")
(description
"@dfn{Phylogenetic clustering} (phyloclustering) is an evolutionary continuous
time Markov Chain model-based approach to identify population structure from
molecular data without assuming linkage equilibrium. The package @code{phyclust}
provides a convenient implementation of phyloclustering for DNA and SNP data,
capable of clustering individuals into subpopulations and identifying molecular
sequences representative of those subpopulations. It is designed in @code{C} for
performance and interfaced with @code{R} for visualization.")
(license license:gpl2+)))
(define-public r-physicalactivity
(package
(name "r-physicalactivity")