gnu: Add r-qtl2.
* gnu/packages/bioinformatics.scm (r-qtl2): New variable.
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@ -8239,6 +8239,35 @@ identify genotyping errors, and to perform single-QTL and two-QTL,
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two-dimensional genome scans.")
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(license license:gpl3)))
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(define-public r-qtl2
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(package
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(name "r-qtl2")
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(version "0.20")
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(source (origin
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(method git-fetch)
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;; Not yet available in cran.
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(uri (git-reference
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(url "https://github.com/rqtl/qtl2.git")
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(commit version)))
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(file-name (git-file-name name version))
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(sha256
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(base32 "0l1asr28q25jzbwrbg5490962sg3y4sjrd0qf09p78ws1aq8vfs0"))))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-data-table" ,r-data-table)
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("r-jsonlite" ,r-jsonlite)
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("r-rcpp" ,r-rcpp)
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("r-rcppeigen" ,r-rcppeigen)
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("r-rsqlite" ,r-rsqlite)
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("r-yaml" ,r-yaml)))
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(home-page "https://kbroman.org/qtl2/")
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(synopsis
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"QTL analysis software for high-dimensional data and complex cross designs")
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(description
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"R/qtl2 (aka qtl2) is a reimplementation of the QTL analysis software
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R/qtl, to better handle high-dimensional data and complex cross designs.")
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(license license:gpl3)))
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(define-public r-zlibbioc
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(package
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(name "r-zlibbioc")
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