gnu: Add r-drimseq.
* gnu/packages/bioconductor.scm (r-drimseq): New variable.
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@ -1668,6 +1668,41 @@ spent loading the full derfinder package when running the F-statistics
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calculation in parallel.")
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calculation in parallel.")
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(license license:artistic2.0)))
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(license license:artistic2.0)))
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(define-public r-drimseq
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(package
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(name "r-drimseq")
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(version "1.22.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "DRIMSeq" version))
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(sha256
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(base32 "0y2jb0hb633id038zmwnfny6h4ai77fdyy02f77vha1z8xg5nl02"))))
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(properties `((upstream-name . "DRIMSeq")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-biocgenerics" ,r-biocgenerics)
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("r-biocparallel" ,r-biocparallel)
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("r-edger" ,r-edger)
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("r-genomicranges" ,r-genomicranges)
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("r-ggplot2" ,r-ggplot2)
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("r-iranges" ,r-iranges)
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("r-limma" ,r-limma)
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("r-mass" ,r-mass)
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("r-reshape2" ,r-reshape2)
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("r-s4vectors" ,r-s4vectors)))
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(native-inputs `(("r-knitr" ,r-knitr)))
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(home-page "https://bioconductor.org/packages/DRIMSeq")
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(synopsis "Differential transcript usage and tuQTL analyses with Dirichlet-multinomial model in RNA-seq")
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(description
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"The package provides two frameworks. One for the differential
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transcript usage analysis between different conditions and one for the tuQTL
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analysis. Both are based on modeling the counts of genomic features (i.e.,
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transcripts) with the Dirichlet-multinomial distribution. The package also
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makes available functions for visualization and exploration of the data and
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results.")
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(license license:gpl3+)))
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(define-public r-bluster
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(define-public r-bluster
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(package
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(package
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(name "r-bluster")
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(name "r-bluster")
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