gnu: Add r-genelendatabase.

* gnu/packages/bioconductor.scm (r-genelendatabase): New variable.
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Ricardo Wurmus 2018-07-04 17:43:33 +02:00 committed by Ricardo Wurmus
parent fa69759963
commit 2cc5110832
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@ -167,6 +167,35 @@ Repeats Finder (TRF mask). Only the AGAPS and AMB masks are \"active\" by
default." )
(license license:artistic2.0)))
(define-public r-genelendatabase
(package
(name "r-genelendatabase")
(version "1.16.0")
(source
(origin
(method url-fetch)
;; We cannot use bioconductor-uri here because this tarball is
;; located under "data/experiment/" instead of "bioc/".
(uri (string-append "https://bioconductor.org/packages/"
"release/data/experiment/src/contrib"
"/geneLenDataBase_" version ".tar.gz"))
(sha256
(base32
"07mmmn53kb7v14msc13dsbm8ghssbvwcrhifrk15hn37bw2p4ja5"))))
(properties
`((upstream-name . "geneLenDataBase")))
(build-system r-build-system)
(propagated-inputs
`(("r-rtracklayer" ,r-rtracklayer)
("r-genomicfeatures" ,r-genomicfeatures)))
(home-page "https://bioconductor.org/packages/geneLenDataBase/")
(synopsis "Lengths of mRNA transcripts for a number of genomes")
(description
"This package provides the lengths of mRNA transcripts for a number of
genomes and gene ID formats, largely based on the UCSC table browser.")
(license license:lgpl2.0+)))
(define-public r-hpar
(package
(name "r-hpar")