gnu: Add r-baynorm.
* gnu/packages/bioconductor.scm (r-baynorm): New variable. Change-Id: I83e82d3d0362874918f423ab01f038c74f3eb265
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@ -22828,6 +22828,45 @@ resolution of the low-dimensional representation into \"sub-spots\", for which
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features such as gene expression or cell type composition can be imputed.")
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(license license:expat)))
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(define-public r-baynorm
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(package
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(name "r-baynorm")
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(version "1.20.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "bayNorm" version))
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(sha256
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(base32 "01lv4w1x43x3f9sdrqikhsr1gdvkgqzrgcd9wnjj76qsljn57ifq"))))
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(properties `((upstream-name . "bayNorm")))
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(build-system r-build-system)
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(propagated-inputs
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(list r-bb
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r-biocparallel
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r-dosnow
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r-fitdistrplus
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r-foreach
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r-iterators
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r-locfit
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r-mass
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r-matrix
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r-rcpp
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r-rcpparmadillo
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r-rcppprogress
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r-singlecellexperiment
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r-summarizedexperiment))
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(native-inputs (list r-knitr))
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(home-page "https://github.com/WT215/bayNorm")
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(synopsis "Single-cell RNA sequencing data normalization")
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(description
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"The bayNorm package is used for normalizing single-cell RNA-seq data.
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The main function is @code{bayNorm}, which is a wrapper function for gene
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specific prior parameter estimation and normalization. The input is a matrix
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of scRNA-seq data with rows different genes and coloums different cells. The
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output is either point estimates from posterior (2D array) or samples from
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posterior (3D array).")
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(license license:gpl2+)))
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(define-public r-biocthis
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(package
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(name "r-biocthis")
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