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gnu: Add r-cmdstanr.

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* gnu/packages/bioinformatics.scm (r-cmdstanr): New variable.

Change-Id: Ic9e83486f7ab7f0e7075343af630c4dcecf597b5
Signed-off-by: Andreas Enge <andreas@enge.fr>
This commit is contained in:
Afkhami, Navid 2024-06-19 14:53:24 +00:00 committed by Andreas Enge
parent 0e5ecc6868
commit 1731b45c51
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1 changed files with 36 additions and 1 deletions
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@ -23,7 +23,7 @@
;;; Copyright © 2021 Hong Li <hli@mdc-berlin.de>
;;; Copyright © 2021, 2022, 2023 Simon Tournier <zimon.toutoune@gmail.com>
;;; Copyright © 2021 Felix Gruber <felgru@posteo.net>
;;; Copyright © 2022, 2023 Navid Afkhami <navid.afkhami@mdc-berlin.de>
;;; Copyright © 2022, 2023, 2024 Navid Afkhami <navid.afkhami@mdc-berlin.de>
;;; Copyright © 2022 Antero Mejr <antero@mailbox.org>
;;; Copyright © 2024 Alexis Simon <alexis.simon@runbox.com>
;;;
@ -11534,6 +11534,41 @@ tasks.")
Pore-C concatemers.")
(license license:gpl3))))
(define-public r-cmdstanr
(let ((commit "a45d4f7d686aa6b57ce25f342a71eea79507f01c")
(revision "1"))
(package
(name "r-cmdstanr")
(version (git-version "0.8.1.9000" revision commit))
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/stan-dev/cmdstanr")
(commit commit)))
(file-name (git-file-name name version))
(sha256
(base32 "01vyh3sy704rs7yvaka2hp6vld0mdl7hbrs20dpbwidgm4ksrvsi"))))
(properties `((upstream-name . "cmdstanr")))
(build-system r-build-system)
(propagated-inputs (list r-checkmate
r-data-table
r-jsonlite
r-posterior
r-processx
r-r6
r-rlang
r-withr))
(native-inputs (list r-knitr))
(home-page "https://github.com/stan-dev/cmdstanr")
(synopsis "R interface to 'CmdStan'")
(description
"This package provides a lightweight interface to Stan
<https://mc-stan.org>. The @code{CmdStanR} interface is an alternative
to RStan that calls the command line interface for compilation and
running algorithms instead of interfacing with C++ via Rcpp'.")
(license license:bsd-3))))
(define-public r-dnamcrosshyb
;; There aren't any releases.
(let ((commit "fe8acb33667e81f00dcb84e0fa75c87ab2db5d8f")