gnu: miso: Install executables.
* gnu/packages/bioinformatics.scm (miso)[source]: Patch "setup.py" to use "setuptools" so that executables are built. * gnu/packages/bioinformatics.scm (miso)[native-inputs]: Add "python2-mock" and "python2-pytz".
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@ -1230,9 +1230,12 @@ sequencing tag position and orientation.")
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(base32
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"0x446867az8ir0z8c1vjqffkp0ma37wm4sylixnkhgawllzx8v5w"))
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(modules '((guix build utils)))
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;; use "gcc" instead of "cc" for compilation
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(snippet
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'(substitute* "setup.py"
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;; Use setuptools, or else the executables are not
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;; installed.
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(("distutils.core") "setuptools")
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;; use "gcc" instead of "cc" for compilation
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(("^defines")
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"cc.set_executables(
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compiler='gcc',
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@ -1250,7 +1253,9 @@ linker_so='gcc -shared'); defines")))))
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("python-scipy" ,python2-scipy)
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("python-matplotlib" ,python2-matplotlib)))
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(native-inputs
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`(("python-setuptools" ,python2-setuptools)))
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`(("python-mock" ,python2-mock) ;for tests
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("python-pytz" ,python2-pytz) ;for tests
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("python-setuptools" ,python2-setuptools)))
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(home-page "http://genes.mit.edu/burgelab/miso/index.html")
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(synopsis "Mixture of Isoforms model for RNA-Seq isoform quantitation")
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(description
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