gnu: Add python2-pysnptools.
* gnu/packages/python.scm (python2-pysnptools): New variable.
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@ -2598,6 +2598,39 @@ toolkits.")
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(package-propagated-inputs
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matplotlib))))))))
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(define-public python2-pysnptools
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(package
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(name "python2-pysnptools")
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(version "0.2.13")
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(source
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(origin
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(method url-fetch)
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(uri (string-append
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"https://pypi.python.org/packages/source/p/pysnptools"
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"/pysnptools-" version ".zip"))
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(sha256
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(base32
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"1rzf5qvwfvd2pp84b14pb2gdvxdk5avnj7rb41ac8gndpkr9g6ib"))))
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(build-system python-build-system)
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(arguments
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`(#:python ,python-2)) ; only Python 2.7 is supported
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(propagated-inputs
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`(("python2-numpy" ,python2-numpy)
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("python2-scipy" ,python2-scipy)
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("python2-pandas" ,python2-pandas)
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("python2-cython" ,python2-cython)))
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(native-inputs
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`(("unzip" ,unzip)
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("python2-setuptools" ,python2-setuptools)))
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(home-page "http://research.microsoft.com/en-us/um/redmond/projects/mscompbio/")
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(synopsis "Library for reading and manipulating genetic data")
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(description
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"PySnpTools is a library for reading and manipulating genetic data. It
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can, for example, efficiently read whole PLINK *.bed/bim/fam files or parts of
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those files. It can also efficiently manipulate ranges of integers using set
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operators such as union, intersection, and difference.")
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(license asl2.0)))
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(define-public python-scipy
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(package
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(name "python-scipy")
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