gnu: Add r-m3c.
* gnu/packages/bioconductor.scm (r-m3c): New variable.
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@ -8116,3 +8116,36 @@ dimensional mass cytometry data.")
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Tool) analysis automatic by constructing a HTTP POST request according to
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user's input and automatically retrieving results from GREAT web server.")
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(license license:expat)))
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(define-public r-m3c
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(package
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(name "r-m3c")
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(version "1.10.0")
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(source
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(origin
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(method url-fetch)
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(uri (bioconductor-uri "M3C" version))
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(sha256
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(base32
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"0zq8lm4280p8h65i7myscwa4srs5ajh944xv6zni2f5sjyp7ij2y"))))
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(properties `((upstream-name . "M3C")))
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(build-system r-build-system)
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(propagated-inputs
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`(("r-cluster" ,r-cluster)
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("r-corpcor" ,r-corpcor)
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("r-doparallel" ,r-doparallel)
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("r-dosnow" ,r-dosnow)
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("r-foreach" ,r-foreach)
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("r-ggplot2" ,r-ggplot2)
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("r-matrix" ,r-matrix)
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("r-matrixcalc" ,r-matrixcalc)
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("r-rtsne" ,r-rtsne)
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("r-umap" ,r-umap)))
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(native-inputs `(("r-knitr" ,r-knitr)))
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(home-page "https://bioconductor.org/packages/M3C")
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(synopsis "Monte Carlo reference-based consensus clustering")
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(description
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"M3C is a consensus clustering algorithm that uses a Monte Carlo
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simulation to eliminate overestimation of @code{K} and can reject the null
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hypothesis @code{K=1}.")
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(license license:agpl3+)))
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