gnu: Add r-m3c.

* gnu/packages/bioconductor.scm (r-m3c): New variable.
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Ricardo Wurmus 2020-08-11 11:26:44 +02:00
parent 697e54b2a1
commit 0b8c7e4bb5
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@ -8116,3 +8116,36 @@ dimensional mass cytometry data.")
Tool) analysis automatic by constructing a HTTP POST request according to
user's input and automatically retrieving results from GREAT web server.")
(license license:expat)))
(define-public r-m3c
(package
(name "r-m3c")
(version "1.10.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "M3C" version))
(sha256
(base32
"0zq8lm4280p8h65i7myscwa4srs5ajh944xv6zni2f5sjyp7ij2y"))))
(properties `((upstream-name . "M3C")))
(build-system r-build-system)
(propagated-inputs
`(("r-cluster" ,r-cluster)
("r-corpcor" ,r-corpcor)
("r-doparallel" ,r-doparallel)
("r-dosnow" ,r-dosnow)
("r-foreach" ,r-foreach)
("r-ggplot2" ,r-ggplot2)
("r-matrix" ,r-matrix)
("r-matrixcalc" ,r-matrixcalc)
("r-rtsne" ,r-rtsne)
("r-umap" ,r-umap)))
(native-inputs `(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/M3C")
(synopsis "Monte Carlo reference-based consensus clustering")
(description
"M3C is a consensus clustering algorithm that uses a Monte Carlo
simulation to eliminate overestimation of @code{K} and can reject the null
hypothesis @code{K=1}.")
(license license:agpl3+)))