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2315 Commits

Author SHA1 Message Date
kmos
bd85d18172 Remove obsolete uses of the TESTLIBDIR construct in favor of 
MODPY_TEST_LIBDIR from the lang/python module

Fix tests for geo/py-fiona while here
 2022-01-26 22:58:21 +00:00
martin
de75401c74 Update py-cftime to 1.5.2. 2022-01-24 08:54:10 +00:00
ajacoutot
a444dc0b1e Update to Imath-3.1.4. 2022-01-22 09:49:26 +00:00
ajacoutot
417256c702 Update to gnumeric-1.12.51. 2022-01-21 07:55:56 +00:00
kmos
3e143c5656 C++ apps need to use ports-gcc, not base-gcc 2022-01-15 21:39:15 +00:00
daniel
af20690cb5 update sklearn to 1.0.2 
This update includes a fix for (currently disputed) CVE-2020-28975 which
affects sklearn version 0.23.2.

ok pirofti@ (MAINTAINER)
 2022-01-02 22:42:56 +00:00
sthen
7f89fa1724 update to visidata-2.8 2021-12-28 09:17:51 +00:00
sthen
7753ae7ce8 update to calc-2.14.0.14 2021-12-28 09:17:29 +00:00
op
482e8b6f04 drop -Werror to unbreak the build on sparc64 and aarch64 
ok kmos
 2021-12-22 17:43:34 +00:00
sthen
a85db99193 update to calc-2.14.0.13 2021-12-14 08:09:52 +00:00
daniel
70e0408a36 update ocaml-zarith to 1.12 
ok chrisz@
 2021-12-12 05:26:18 +00:00
op
de43b1d1ca +cglm 2021-12-10 13:27:33 +00:00
op
10639cd0a2 import cglm-0.8.4 
cglm is an highly optimized 2D and 3D math library, also know as OpenGL
Mathematics (glm) for C.  cglm provides lot of utils to help math
operations to be fast and quick to write.

OK sthen@
 2021-12-10 13:27:02 +00:00
daniel
efd5a97f0a update ocaml to 4.12.1 
The ocaml update requires ocaml-camlp4 to be updated in sync and all
dependant ports need a bump.

ok avsm@ (MAINTAINER)
 2021-12-10 04:10:59 +00:00
espie
096985e14d cleaner patch, likely to be included by upstream 2021-12-08 12:51:18 +00:00
espie
49b46c0d59 +igraph 2021-12-08 10:44:35 +00:00
espie
40ce2ce92d igraph is a graph library, in C/C++ 
okay sthen@
 2021-12-08 10:44:05 +00:00
daniel
6a30c07e4e update coq to 8.13.2 2021-12-04 04:33:45 +00:00
daniel
68420eccff update ocaml to to 4.11.2 and bump all dependant ports 
As usual camlp4 and camlp4 need to be updated in sync with ocaml. All
ocaml ports were successfully builds- tested on amd64. coccinelle remains
broken, but was built with the proposed diff floating on ports@

ok chrisz@
 2021-12-02 03:59:19 +00:00
sthen
8a0f75f8fb update to calc-2.14.0.9 2021-11-25 09:18:52 +00:00
bcallah
d9980dbc13 Update to bc-gh-5.2.1 
Changelog: https://github.com/gavinhoward/bc/releases
 2021-11-23 13:03:57 +00:00
martin
cc61328202 Update h5py to 3.6.0. 2021-11-20 16:21:48 +00:00
sthen
b1160892e4 missing BDEP on py-setuptools_scm, found by phessler@ 2021-11-18 13:22:24 +00:00
sthen
e862948ffd update to p5-Math-GMP-2.24 2021-11-18 09:42:35 +00:00
sthen
bc48b9ee9d update to py3-mpmath-1.2.1 2021-11-18 09:20:51 +00:00
sthen
d9dd73841d update to visidata-2.7.1 2021-11-18 09:05:08 +00:00
sthen
dae9796f2f update to calc-2.14.0.7 2021-11-13 14:19:49 +00:00
tb
05471fbccc math/lean: update to 3.35.1 2021-11-09 11:24:29 +00:00
rsadowski
2166788046 Regen WANTLIB 
OK from maintainer
 2021-11-08 11:39:21 +00:00
jca
041f9a61dd NOT_FOR_ARCHS=${GCC3_ARCHS} is redundant given COMPILER=base-clang ports-gcc 2021-11-07 19:06:43 +00:00
martin
6d478228f9 Update py-netcdf4 to 1.5.8. 2021-11-05 20:25:28 +00:00
martin
d320dcc720 Update py-cftime to 1.5.1.1. 2021-11-05 20:10:33 +00:00
feinerer
71fc4ddd2f Update to R 4.1.2 2021-11-04 07:57:06 +00:00
sthen
beba1f8f97 update to calc-2.14.0.6 2021-11-03 22:26:29 +00:00
sthen
db97a9fbd0 sort 2021-11-02 21:11:41 +00:00
sthen
97a499fb6f bump REVISION for switch from Python 3.8 -> 3.9 2021-11-02 08:25:49 +00:00
sthen
3fb7cdbcf6 bump REVISION for switch from Python 3.8 -> 3.9 2021-11-02 00:01:35 +00:00
sthen
189f2bff94 adjust ports with hardcoded Python 3.8 versions, ok kmos@ 2021-11-02 00:00:06 +00:00
sthen
b8087f7e85 update to veusz-3.4, ok/same diff bcallah@ 2021-10-30 21:01:27 +00:00
bcallah
0faf43f50f Update to bcal-2.3 
Changelog: https://github.com/jarun/bcal/releases/tag/v2.3
 2021-10-30 04:02:05 +00:00
sthen
3f3f090494 add annotations for py-* ports using python 3 without a ,python3 flavour, 
change some existing annotations, so "grep ' py-' ports/*/Makefile | grep
-v python3" does better at finding the py-* things still using py2
 2021-10-29 16:23:36 +00:00
jca
87e05eb182 Disable hdf5 on architectures without gfortran 
To be revisited with martin@ later if disabling fortran proves
possible/useful.
 2021-10-28 14:46:11 +00:00
jca
8894f522ea Make fortran optional in numpy 
Since ports/lang/gcc doesn't have riscv64 support yet this helps us
unlock a bunch of ports there.  Disabling fortran/blas/lapack means that
some feature are missing.  This is mitigated by numpy shipping a minimal
lapack copy translated to C.
 2021-10-28 10:28:32 +00:00
steven
48d103b901 update to 0.51 
ok afresh1@
 2021-10-27 17:07:25 +00:00
steven
402faf5a4c update to 0.44 
ok afresh1@
 2021-10-27 17:06:33 +00:00
sthen
c698625ad0 update to py3-pandas-1.3.4 2021-10-26 19:02:02 +00:00
sthen
ecfe58d04a update to py3-numexpr-2.7.3 2021-10-26 19:01:51 +00:00
bket
a8f676de3e Update to py-numpy-1.19.5 
Feedback from and bulk testing (i386) by sthen@. Thank you!

OK sthen@
 2021-10-25 06:33:04 +00:00
martin
1ffe8cd980 Update h5py to 3.5.0. 
incorporate improvements by bket@:
- skip tests related to mpi_file_name
- fix free() related segfault in lzf_filter
- prepare the port for newer numpy/Cython/python versions
- run tests in fake

OK bket@
 2021-10-24 11:43:54 +00:00
sthen
e27d4113bb switch some Python ports to py3-only. maintainer oks for the relevant 
ports from semarie, kmos, jung, martin, benoit, juanfra. general oks
benoit bket daniel kmos
 2021-10-24 09:28:46 +00:00