2096 Commits

Author SHA1 Message Date
daniel
baac4a0e6e Update to coq 8.12.0; tested by myself and MAINTAINER on amd64. 2020-08-09 02:45:34 +00:00
bcallah
924c96e714 Update to bc-gh-3.1.5. Fixes a pair of crashes.
Changelog: https://github.com/gavinhoward/bc/releases/tag/3.1.5
2020-08-06 05:44:02 +00:00
martin
3b64b99872 Update py-netcdf4 to 1.5.4 and adapt to py-cftime change. 2020-08-05 09:10:16 +00:00
martin
4c2e7f4abb Move py-cftime away from ${MODPY_DEFAULT_VERSION_3} to a proper python3
flavor

prodded by and OK kn@
2020-08-05 09:09:00 +00:00
bcallah
d23f5a91ac Update to bc-gh-3.1.4 2020-08-04 14:24:33 +00:00
bcallah
5a5d5747a3 Update to spread-sheet-widget-0.6 -- note the major bump because some
symbols were removed.

math/pspp is happy with this
2020-07-29 17:20:54 +00:00
martin
563e0aeebd Update py-cftime to 1.2.1. 2020-07-23 18:22:13 +00:00
bcallah
2ba75dec86 Update to spread-sheet-widget-0.5
Note the minor bump
Changelog: http://git.savannah.gnu.org/cgit/ssw.git/log/
Its one consumer (math/pspp) is happy
2020-07-22 15:33:14 +00:00
kmos
d3aea23e66 Another REVISION bump to deal with the same REVISION situation.
I forgot about this one because the build wouldn't attempt until I fixed
the other 3. This resolves building on sparc64.
2020-07-22 06:59:19 +00:00
kmos
d372508443 Bump REVISION on each of these ports to iron out a sparc64 build issue.
I had tested an early diff from pirofti that fixed BUILD_DEPENDS but
also bumped REVISION. In the meantime sthen had just fixed them without
the unnecessary REVISION bump. Bumping REVISION will get them building
on sparc64 again.
2020-07-22 05:25:43 +00:00
daniel
a9834e3878 Update pandas to 1.0.5 to pick up fixes for a few bugs and regressions.
ok bket@
2020-07-18 21:13:41 +00:00
daniel
a5a1170e3c Fix typo in MAINTAINER name; from MAINTAINER. 2020-07-18 18:11:03 +00:00
jasper
9e4adeb421 update to py-graphviz-0.14.1 2020-07-17 17:35:36 +00:00
daniel
0dc6ae2fcc Update to pari 2.11.4. 2020-07-16 23:21:47 +00:00
daniel
0c09368707 +4ti2
+cddlib
2020-07-16 05:46:38 +00:00
daniel
a4ae0136cd import 4ti2
4ti2 is a software package for algebraic, geometric and combinatorial
problems on linear spaces. It computes Graver basis, Groebner basis,
in case of a linear , matrix or more general lattice program and a lot
more programs in linear spaces.

From Dimitri Karamazav; ok rsadowski@
2020-07-16 05:42:27 +00:00
daniel
2abc46427e import cddlib
The C-library cddlib can be used for the reverse operation (i.e. convex hull
computation). This means that one can move back and forth between an inequality
representation and a generator (i.e. vertex and ray) representation of a
polyhedron with cddlib. Also, cddlib can solve a linear programming problem,
i.e. a problem of maximizing and minimizing a linear function over P.

From Dimitri Karamazov; ok rsadowski@
2020-07-16 04:46:18 +00:00
daniel
68586efc70 Update to coq 8.11.2; ok Yoza Toda (MAINTAINER) 2020-07-16 02:50:07 +00:00
martin
7aa7c0194d Upadte py-cftime to 1.2.0. 2020-07-13 12:03:49 +00:00
sthen
6cc9779250 switch my maintainer email addresses to my own domain 2020-07-11 22:54:35 +00:00
bcallah
8a5cf96534 Update to bc-gh-3.1.3
Changelog: https://github.com/gavinhoward/bc/releases/tag/3.1.3
2020-07-11 16:57:10 +00:00
kn
74ac903a34 Drop myself as MAINTAINER 2020-07-08 22:57:41 +00:00
bcallah
9f89f62bcb Remove math/ebc; it has been renamed to math/bc-gh 2020-07-08 21:02:26 +00:00
bcallah
8297f7b49a +bc-gh
-ebc
2020-07-08 21:01:52 +00:00
bcallah
ecddfba398 Re-import math/ebc as math/bc-gh. Renaming because of upstream preference
for this name, plus convergence with other packaging systems that use this
name.

While here, update bc-gh to version 3.1.1. Also improve 64-bit check in the
Makefile.

ok jca@ some time ago

This is an implementation of the POSIX bc calculator that implements GNU
bc extensions as well as the period (.) extension from the BSD flavor of
bc.

This bc also includes an implementation of dc in the same binary,
accessible via a symbolic link, which implements all *BSD and GNU
extensions, though the ! command is omitted for security concerns.
2020-07-08 21:01:13 +00:00
ajacoutot
78cbe5e423 Missing BDEP on devel/cmake. 2020-07-05 07:06:56 +00:00
sthen
8cee6dd6c1 bump, add missing RDEP 2020-07-04 10:02:46 +00:00
sthen
95d31a4bd8 bump for search.cpan.org->metacpan.org change 2020-07-03 21:44:29 +00:00
sthen
d9cfe4113e bump REVISION; python 3 default changed to 3.8 2020-07-03 21:12:24 +00:00
bcallah
b2f23cd8b1 rsession does in fact link libR, which promotes math/R to an LDEP.
Because libR doesn't live in the usual ${LOCALBASE}/lib, add another -rpath
entry in LDFLAGS, like we do for inotify.
Bump.
Discovered by thfr@
2020-07-02 18:46:50 +00:00
bcallah
41bb59cc0d +rstudio 2020-07-01 18:10:35 +00:00
bcallah
ab176a8906 Import math/rstudio, the IDE for R.
ok feinerer@
Works; improvements in-tree to come.

RStudio is an integrated development environment (IDE) for R.
It includes a console, syntax-highlighting editor that supports direct
code execution, as well as tools for plotting, history, debugging and
workspace management.
2020-07-01 18:10:07 +00:00
sthen
781c44809d py-scikit-learn: use MODPY_FLAVOR for py-joblib 2020-07-01 10:07:33 +00:00
ajacoutot
12a3b051fd Needs py-numpy at build time:
ModuleNotFoundError: No module named 'numpy'
2020-06-30 07:04:17 +00:00
sthen
e17bbcfcd0 BUILD_DEPENDS+=${RUN_DEPENDS} needed for at least some dependencies of these 2020-06-29 22:17:50 +00:00
sthen
122de8abad py-ecos: BUILD_DEPENDS=${RUN_DEPENDS} to unbreak build 2020-06-28 21:29:20 +00:00
jasper
16e989246a update to z3-4.8.8 2020-06-28 12:19:35 +00:00
pirofti
72d228a52c Switch ports to FLAVOR=python3.
OK sthen@
2020-06-26 12:57:45 +00:00
pirofti
128b139175 Link py-osqp. 2020-06-26 10:47:13 +00:00
pirofti
612b7a6131 Import py-osqp.
The OSQP (Operator Splitting Quadratic Program) solver is a numerical
optimization package for solving convex quadratic programs in the form

minimize   (1/2)x'Px+q'x
subject to l <= Ax <= u

where x is the optimization variable and P is a positive semidefinite matrix.

OK sthen@
2020-06-26 10:45:43 +00:00
pirofti
0171e8f080 Link py-ecos, py-cvxopt, py-cvxpy, py-scs. 2020-06-26 10:19:11 +00:00
pirofti
7a676dfdb2 Import py-scs.
SCS (splitting conic solver) is a numerical optimization package
for solving large-scale convex cone problems, based on our paper
Conic Optimization via Operator Splitting and Homogeneous Self-Dual
Embedding.

It is written in C and can be used in other C, C++, Python, Matlab,
R, Julia, and Ruby, programs via the linked interfaces.

It can also be called as a solver from convex optimization toolboxes
CVX (3.0 or later), CVXPY, Convex.jl, and Yalmip.
2020-06-26 10:15:55 +00:00
pirofti
364796c74f Import py-cvxpy.
CVXPY is a Python-embedded modeling language for convex optimization
problems.  It allows you to express your problem in a natural way
that follows the math, rather than in the restrictive standard form
required by solvers.
2020-06-26 10:15:05 +00:00
pirofti
055b64528c Import py-cvxopt.
CVXOPT is a free software package for convex optimization based on
the Python programming language. It can be used with the interactive
Python interpreter, on the command line by executing Python scripts,
or integrated in other software via Python extension modules. Its
main purpose is to make the development of software for convex
optimization applications straightforward by building on Python's
extensive standard library and on the strengths of Python as a
high-level programming language.
2020-06-26 10:14:06 +00:00
pirofti
c565234831 Import py-ecos.
ECOS is a numerical software for solving convex second-order cone
programs (SOCPs) of type

  min  c'x
  s.t. Ax = b
       Gx <=_K h

where the last inequality is generalized, i.e. h - Gx belongs to the
cone K.
2020-06-26 10:12:53 +00:00
pirofti
489daa2bea Fix email address. 2020-06-26 10:01:42 +00:00
pirofti
c9234f2c05 Link py-PyWavelets. 2020-06-26 09:59:24 +00:00
pirofti
b2e074dba1 Import py-PyWavelets.
PyWavelets is a Python wavelet transforms module that includes:

- nD Forward and Inverse Discrete Wavelet Transform (DWT and IDWT)
- 1D and 2D Forward and Inverse Stationary Wavelet Transform
  (Undecimated Wavelet Transform)
- 1D and 2D Wavelet Packet decomposition and reconstruction
- 1D Continuous Wavelet Tranfsorm
- Computing Approximations of wavelet and scaling functions
- Over 100 built-in wavelet filters and support for custom wavelets
- Single and double precision calculations
- Real and complex calculations
- Results compatible with Matlab Wavelet Toolbox (TM)

Required by py-scikit-image
2020-06-26 09:58:03 +00:00
pirofti
01df5e935d Link py-scikit-image 2020-06-26 09:04:39 +00:00
pirofti
eaaa64499f Import math/py-scikit-image.
Image Processing SciKit

Image processing algorithms for SciPy, including IO, morphology,
filtering, warping, color manipulation, object detection, etc.

OK robert@
2020-06-26 09:03:41 +00:00