2165 Commits

Author SHA1 Message Date
rsadowski
2bde1cb376 Unbreak build after recent Qt 5.15 update.
Add missing QPainterPath include
2021-01-19 06:41:10 +00:00
kmos
4f9de98e7d py-scikit-image uses c++0x so base-gcc cannot be used
Fixes the build on sparc64

tweaks from and ok sthen@
2021-01-16 21:49:14 +00:00
sthen
a74a9984ca update to libqalculate-3.16.1 2021-01-10 16:10:37 +00:00
naddy
b14c335622 apply a bandaid to math/libqalculate to fix the build with libc++ 10.0
From upstream, although the start of the Git repository there post-dates
version 0.9.7.
2021-01-10 14:00:26 +00:00
sthen
75057f501f update to visidata-2.1.1 2021-01-09 17:50:07 +00:00
sthen
a28a9f15a0 visidata: add openpyxl to README as optional dep 2021-01-05 13:03:14 +00:00
sthen
d80c418015 regen PLISTs for python ports with .so files that end up renamed due to
the EXT_SUFFIX change in Python 3.8.7
2021-01-04 14:06:26 +00:00
benoit
a0f6724c28 Update to nlopt-2.7.0.
from wen heping with tweaks by me
2020-12-30 14:37:54 +00:00
benoit
513cd4b9a8 Update to p5-Math-Base85-0.5. 2020-12-16 05:36:27 +00:00
daniel
769d563814 update py-sympy to 1.7.1 2020-12-13 04:41:29 +00:00
martin
70adb26e58 Update mlpack to 3.4.2.
OK espie@
2020-12-11 12:42:28 +00:00
martin
76e6ea9c30 Update armadillo to 9.900.4.
OK espie@
2020-12-11 12:40:44 +00:00
martin
f7eb008ba8 Update cddlib to 0.94m. shlib patch is no longer required.
From maintainer Dimitri Karamazov, thanks!
2020-12-11 12:38:20 +00:00
martin
bf17c60bf2 Update py-netcdf4 to 1.5.5. 2020-12-09 12:08:05 +00:00
martin
fac8df74b6 Update h5py to 3.1.0. 2020-12-09 09:52:23 +00:00
sthen
fc02efed2e visidata: update to 2.1 2020-12-08 20:34:07 +00:00
sthen
626a268fcb visidata: update pkg/README now that py3-pdfminer provides a suitable version 2020-12-08 08:17:03 +00:00
sthen
3e2a19beb5 committed upstream 2020-12-07 11:05:48 +00:00
sthen
320e77e26f visidata: repair .xls reading, add a readme showing actual pkgnames for
deps.
2020-12-06 14:12:40 +00:00
sthen
9487fad049 +visidata 2020-12-06 12:55:48 +00:00
sthen
48a5b600af import math/visidata, ok/feedback landry@
VisiData is an interactive multitool for tabular data. It combines the
clarity of a spreadsheet, the efficiency of the terminal, and the power
of Python, into a lightweight utility which can handle millions of rows
with ease.

It's very flexible - see https://www.visidata.org/blog/2020/ten/ for
examples of what it can do, https://jsvine.github.io/intro-to-visidata/
for a tutorial, and the vd(1) manual for a good reference guide.

All of the obvious data formats are supported, as are more specialist
types including pcap, HTML tables, SQL databases, geographic data and
more - see https://www.visidata.org/formats/. This package does not
force optional dependencies for all of these - check the list or try
opening the file and see the "module not found" message - pkglocate
is useful to find the relevant py3-module to install.
2020-12-06 12:55:25 +00:00
martin
24ac22712c Update hdf5 to 1.12.0:
- take maintainer (thanks Ingo)
- enable fortran
- use configure argument for example dir instead of post-install mv(1)
- API changes require major bump to all shlib
- pull patches from upstream to respect DESTDIR for examples
- fix h5repack_plugin.sh test

OK feinerer@, extra testing for gdal,python3 from landry@
2020-12-02 13:27:54 +00:00
bcallah
a705590844 Update to bc-gh-3.2.2; mostly bugfixes
Combined changelog from 3.1.6 to 3.2.2:
https://github.com/gavinhoward/bc/releases
2020-11-28 19:25:16 +00:00
daniel
6d3b6a15c4 update to py-scikit-image 0.17.2; maintainer timeout 2020-11-28 02:44:19 +00:00
daniel
bf994eea35 update coq to 8.12.1; a bug fix release
ok Yozo Toda (MAINTAINER)
2020-11-26 05:30:03 +00:00
kmos
0264809873 Fix build for matio on sparc64 by making it use ports-gcc rather
than base-gcc

(Fails with "error: stray '\357' in program")

ok benoit
2020-11-23 14:32:51 +00:00
daniel
1558cd5933 update to ocaml-zarith 1.11
ok chrisz@
2020-11-22 21:30:43 +00:00
daniel
1fdf3402e2 update to ocaml-num 1.4
ok chrisz@
2020-11-22 21:30:15 +00:00
daniel
6c5b6c5d3b update pandas to 1.1.4 for the latest batch of bug fixes
ok bket@
2020-11-22 17:43:41 +00:00
daniel
bf55ef6336 update sympy to 1.6.2 2020-11-21 20:01:41 +00:00
sthen
8d2eb0a5d3 math/lrs tweaks, ok edd@, works for maintainer
- don't patch away upstream's INCLUDEDIR/LIBDIR mechanism to replace
it with something using CPPFLAGS/LDFLAGS which does exactly the same;
simplifies the patch

- building the targets chosen for the port requires a compiler with
128-bit int support; afaik this requires clang, or GCC 4.6 or newer,
and a 64-bit arch. So I've set the compiler and restricted archs.
(alternatively we could use "ALL_TARGETS=lrs64" on those archs but that
would mean extra mess with arch-specific PLISTs).

- simplify the test target
2020-11-21 14:13:06 +00:00
edd
34a1d6de32 Update math/lrs to version 071a.
Diff sent in by Dimitri Karamazov and then tweaks from sthen@ and myself.

Dimitri is also taking MAINTAINER since I don't use this any more.

Thanks!
2020-11-20 19:16:18 +00:00
martin
04efef6528 Update py-cftime to 1.3.0. 2020-11-20 10:15:39 +00:00
benoit
14156cf446 Update to matio-1.5.19.
From wen heping with tweaks by me
2020-11-18 14:20:14 +00:00
kmos
32db1043f9 py-scikit-learn uses C++11, so needs ports-gcc for base-gcc arches.
ok daniel
2020-11-14 19:20:31 +00:00
benoit
c2990afeb0 Update to p5-Math-GMP-2.20. 2020-11-11 09:21:25 +00:00
benoit
c6514ec169 Update to p5-Statistics-Descriptive-3.0800. 2020-11-05 21:47:17 +00:00
jasper
3c6465a4a1 fix Makefile entry for py-networkx and drop maintainership 2020-11-05 18:34:46 +00:00
rsadowski
8ed6752cb7 Removed "KDE porting team" aka. me as maintainer. 2020-11-03 17:34:50 +00:00
benoit
fda16ec0a5 Update to p5-Math-FFT-1.36. 2020-11-01 10:30:50 +00:00
daniel
f49cc8e774 unbreak sklearn by updating to 0.23.2
Doing "import sklearn" resulted in breakage at runtime due to sklearn
0.20.3 not being compatible with python 3.8.

In addition:
- add WANTLIB
- rework the DEPs for the new version
- remove SKLEARN_NO_OPENMP which was dropped in commit 9876f748

Breakage initially reported by James Cook (who provided many pointers on
moving forward) and also tested the update.
2020-10-28 04:04:04 +00:00
daniel
31b0ea8cdb update to 1.5.3; a bug-fix release 2020-10-28 01:24:38 +00:00
daniel
efb76aed8e retire py-Numeric which has been replaced by py-numpy
ok kmos kn
2020-10-18 20:46:44 +00:00
daniel
1ec5612c68 retire py-Numeric; ok kmos kn 2020-10-18 20:41:25 +00:00
benoit
fffa9d7bc1 Update to p5-Math-FFT-1.35, from wen heping 2020-10-15 07:13:43 +00:00
daniel
9b8e165000 Update py-scipy to 1.5.2 which is now python3-only.
tweaks and ok bket@
2020-10-12 22:04:32 +00:00
daniel
91fed9e036 Update to py-pandas 1.1.3
ok bket@
2020-10-12 21:59:54 +00:00
feinerer
f7483662c9 Update to HDF5 1.10.7 2020-10-12 06:56:07 +00:00
feinerer
763637a16f Update to R 4.0.3 2020-10-10 09:52:51 +00:00
daniel
000dce6fc5 Make py-patsy and py-scs python3 only so scipy can be updated.
ok bket@, kmos@
2020-10-08 20:34:52 +00:00