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import math/py-h5py

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the h5py package is a Pythonic interface to the HDF5 binary data format.

input bket@ and sthen@
OK bket@
This commit is contained in:
martin 2020-03-04 07:54:18 +00:00
parent 65a3c5badc
commit cd30a8743b
4 changed files with 205 additions and 0 deletions
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math/py-h5py/Makefile Normal file
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# $OpenBSD: Makefile,v 1.1.1.1 2020/03/04 07:54:18 martin Exp $
COMMENT = pythonic interface to the HDF5 binary data format
MODPY_EGG_VERSION = 2.10.0
DISTNAME = h5py-${MODPY_EGG_VERSION}
PKGNAME = py-${DISTNAME}
CATEGORIES = math
HOMEPAGE = https://www.h5py.org/
MAINTAINER = Martin Reindl <martin@catai.org>
# BSD
PERMIT_PACKAGE = Yes
MODULES = lang/python
MODPY_SETUPTOOLS = Yes
MODPY_PI = Yes
MODPY_PYTEST = Yes
FLAVORS = python3
FLAVOR = python3
WANTLIB = pthread ${MODPY_WANTLIB} hdf5 hdf5_hl
BUILD_DEPENDS = lang/cython${MODPY_FLAVOR} \
math/py-numpy${MODPY_FLAVOR} \
devel/py-pkgconfig${MODPY_FLAVOR} \
devel/py-six${MODPY_FLAVOR}
LIB_DEPENDS = math/hdf5
TEST_DEPENDS = devel/py-coveralls${MODPY_FLAVOR} \
devel/py-test-cov${MODPY_FLAVOR}
do-test: fake
cd ${WRKDIR} && ${MAKE_ENV} PYTHONPATH=${WRKINST}${MODPY_SITEPKG} \
${MODPY_BIN} -c 'import h5py; h5py.run_tests()'
.include <bsd.port.mk>

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SHA256 (h5py-2.10.0.tar.gz) = hEEnmJJdyHD/1xB/BF12WeYPXUbRxwxwA3Uki/a/US0=
SIZE (h5py-2.10.0.tar.gz) = 301057

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math/py-h5py/pkg/DESCR Normal file
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The h5py package is a Pythonic interface to the HDF5 binary data
format.
It lets you store huge amounts of numerical data, and easily
manipulate that data from NumPy. For example, you can slice into
multi-terabyte datasets stored on disk, as if they were real NumPy
arrays. Thousands of datasets can be stored in a single file,
categorized and tagged however you want.
H5py uses straightforward NumPy and Python metaphors, like dictionary
and NumPy array syntax. For example, you can iterate over datasets
in a file, or check out the .shape or .dtype attributes of datasets.
You don't need to know anything special about HDF5 to get started.
In addition to the easy-to-use high level interface, h5py rests on
a object-oriented Cython wrapping of the HDF5 C API. Almost anything
you can do from C in HDF5, you can do from h5py.
Best of all, the files you create are in a widely-used standard
binary format, which you can exchange with other people, including
those who use programs like IDL and MATLAB.

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math/py-h5py/pkg/PLIST Normal file
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@comment $OpenBSD: PLIST,v 1.1.1.1 2020/03/04 07:54:18 martin Exp $
lib/python${MODPY_VERSION}/site-packages/h5py/
lib/python${MODPY_VERSION}/site-packages/h5py-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/
lib/python${MODPY_VERSION}/site-packages/h5py-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/PKG-INFO
lib/python${MODPY_VERSION}/site-packages/h5py-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/SOURCES.txt
lib/python${MODPY_VERSION}/site-packages/h5py-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/dependency_links.txt
lib/python${MODPY_VERSION}/site-packages/h5py-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/requires.txt
lib/python${MODPY_VERSION}/site-packages/h5py-${MODPY_EGG_VERSION}-py${MODPY_VERSION}.egg-info/top_level.txt
lib/python${MODPY_VERSION}/site-packages/h5py/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/h5py/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/h5py/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/${MODPY_PYCACHE}h5py_warnings.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/${MODPY_PYCACHE}highlevel.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/${MODPY_PYCACHE}ipy_completer.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/${MODPY_PYCACHE}version.${MODPY_PYC_MAGIC_TAG}pyc
@so lib/python${MODPY_VERSION}/site-packages/h5py/_conv.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/_errors.so
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/h5py/_hl/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/${MODPY_PYCACHE}attrs.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/${MODPY_PYCACHE}base.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/${MODPY_PYCACHE}compat.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/${MODPY_PYCACHE}dataset.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/${MODPY_PYCACHE}datatype.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/${MODPY_PYCACHE}dims.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/${MODPY_PYCACHE}files.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/${MODPY_PYCACHE}filters.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/${MODPY_PYCACHE}group.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/${MODPY_PYCACHE}selections.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/${MODPY_PYCACHE}selections2.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/${MODPY_PYCACHE}vds.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/attrs.py
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/base.py
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/compat.py
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/dataset.py
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/datatype.py
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/dims.py
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/files.py
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/filters.py
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/group.py
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/selections.py
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/selections2.py
lib/python${MODPY_VERSION}/site-packages/h5py/_hl/vds.py
@so lib/python${MODPY_VERSION}/site-packages/h5py/_objects.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/_proxy.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/defs.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5a.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5ac.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5d.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5ds.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5f.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5fd.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5g.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5i.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5l.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5o.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5p.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5pl.so
lib/python${MODPY_VERSION}/site-packages/h5py/h5py_warnings.py
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5r.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5s.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5t.so
@so lib/python${MODPY_VERSION}/site-packages/h5py/h5z.so
lib/python${MODPY_VERSION}/site-packages/h5py/highlevel.py
lib/python${MODPY_VERSION}/site-packages/h5py/ipy_completer.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/
lib/python${MODPY_VERSION}/site-packages/h5py/tests/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}common.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_attribute_create.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_attrs.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_attrs_data.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_base.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_completions.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_dataset.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_dataset_getitem.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_dataset_swmr.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_datatype.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_deprecation.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_dimension_scales.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_dims_dimensionproxy.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_dtype.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_file.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_file2.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_file_image.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_filters.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_group.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_h5.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_h5d_direct_chunk.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_h5f.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_h5p.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_h5pl.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_h5t.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_objects.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_selections.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_slicing.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/${MODPY_PYCACHE}test_threads.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/common.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_attribute_create.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_attrs.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_attrs_data.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_base.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_completions.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_dataset.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_dataset_getitem.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_dataset_swmr.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_datatype.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_deprecation.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_dimension_scales.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_dims_dimensionproxy.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_dtype.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_file.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_file2.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_file_image.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_filters.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_group.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_h5.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_h5d_direct_chunk.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_h5f.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_h5p.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_h5pl.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_h5t.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_objects.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_selections.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_slicing.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_threads.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_vds/
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_vds/__init__.py
${MODPY_COMMENT}lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_vds/${MODPY_PYCACHE}/
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_vds/${MODPY_PYCACHE}__init__.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_vds/${MODPY_PYCACHE}test_highlevel_vds.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_vds/${MODPY_PYCACHE}test_lowlevel_vds.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_vds/${MODPY_PYCACHE}test_virtual_source.${MODPY_PYC_MAGIC_TAG}pyc
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_vds/test_highlevel_vds.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_vds/test_lowlevel_vds.py
lib/python${MODPY_VERSION}/site-packages/h5py/tests/test_vds/test_virtual_source.py
@so lib/python${MODPY_VERSION}/site-packages/h5py/utils.so
lib/python${MODPY_VERSION}/site-packages/h5py/version.py