update to py3-scikit-image-0.19.3

math/py-scikit-image/Makefile

@@ -1,7 +1,6 @@
 COMMENT =		image processing routines for SciPy
 
-MODPY_EGG_VERSION =	0.17.2
-REVISION =		2
+MODPY_EGG_VERSION =	0.19.3
 DISTNAME =		scikit-image-${MODPY_EGG_VERSION}
 PKGNAME =		py-${DISTNAME}
 CATEGORIES =		math
@@ -22,8 +21,7 @@ FLAVORS =		python3
 FLAVOR =		python3
 
 MODPY_PI =		Yes
-MODPY_SETUPTOOLS =	Yes
-MODPY_PYTEST =		Yes
+MODPY_PYBUILD =		setuptools
 
 RUN_DEPENDS =		math/py-numpy${MODPY_FLAVOR} \
 			math/py-scipy${MODPY_FLAVOR} \
@@ -31,10 +29,15 @@ RUN_DEPENDS =		math/py-numpy${MODPY_FLAVOR} \
 			math/py-networkx${MODPY_FLAVOR} \
 			graphics/py-Pillow${MODPY_FLAVOR} \
 			graphics/py-imageio${MODPY_FLAVOR} \
+			graphics/py-tifffile${MODPY_FLAVOR} \
 			math/py-PyWavelets${MODPY_FLAVOR}
 
-BUILD_DEPENDS =         lang/cython${MODPY_FLAVOR} \
+BUILD_DEPENDS =		lang/cython${MODPY_FLAVOR} \
+			lang/pythran${MODPY_FLAVOR} \
 			devel/py-wheel${MODPY_FLAVOR} \
 			math/py-numpy${MODPY_FLAVOR}
 
+# needs a bunch of new dependencies
+NO_TEST =		Yes
+
 .include <bsd.port.mk>

math/py-scikit-image/distinfo

@@ -1,2 +1,2 @@
-SHA256 (scikit-image-0.17.2.tar.gz) = vZVMBYjw9+gdl2PcleBpUOaCR9VAR24Gy3e8vNjC2LM=
-SIZE (scikit-image-0.17.2.tar.gz) = 29818001
+SHA256 (scikit-image-0.19.3.tar.gz) = JLU2feF2LabuEm3Y8wzE5+/aR04NfXBoVDPw46ouxFA=
+SIZE (scikit-image-0.19.3.tar.gz) = 22232287

math/py-scikit-image/patches/patch-pyproject_toml

@@ -0,0 +1,43 @@
+Index: pyproject.toml
+--- pyproject.toml.orig
++++ pyproject.toml
+@@ -1,37 +1,9 @@
+ [build-system]
+ requires = [
+     "wheel",
+-    "setuptools<=59.4",
++    "setuptools",
+     "packaging",
+     "Cython>=0.29.24,<3.0",
+     "pythran",
+-
+-    # We follow scipy for much of these pinnings
+-    # https://github.com/scipy/scipy/blob/master/pyproject.toml
+-    # numpy 1.19 was the first minor release to provide aarch64 wheels, but
+-    # wheels require fixes contained in numpy 1.19.2
+-    "numpy==1.19.2; python_version=='3.7' and platform_machine=='aarch64'",
+-    "numpy==1.19.2; python_version=='3.8' and platform_machine=='aarch64'",
+-    # aarch64 for py39 and py310 are covered by the default requirement below
+-
+-    # arm64 on Darwin supports Python 3.8 and above requires numpy>=1.20.0
+-    "numpy==1.20.0; python_version=='3.8' and platform_machine=='arm64' and platform_system=='Darwin'",
+-    "numpy==1.20.0; python_version=='3.9' and platform_machine=='arm64' and platform_system=='Darwin'",
+-    # arm64 for py310 is covered by the default requirement below
+-
+-    # default numpy requirements
+-    "numpy==1.17.3; python_version=='3.7' and (platform_machine!='arm64' or platform_system!='Darwin') and platform_machine!='aarch64' and platform_python_implementation != 'PyPy'",
+-    "numpy==1.17.3; python_version=='3.8' and (platform_machine!='arm64' or platform_system!='Darwin') and platform_machine!='aarch64' and platform_python_implementation != 'PyPy'",
+-    "numpy==1.19.3; python_version=='3.9' and (platform_machine!='arm64' or platform_system!='Darwin') and platform_python_implementation != 'PyPy'",
+-    "numpy==1.21.4; python_version=='3.10' and platform_python_implementation != 'PyPy'",
+-
+-    # First PyPy versions for which there are numpy wheels
+-    "numpy==1.20.0; python_version=='3.7' and platform_python_implementation=='PyPy'",
+-
+-    # For Python versions which aren't yet officially supported,
+-    # we specify an unpinned NumPy which allows source distributions
+-    # to be used and allows wheels to be used as soon as they
+-    # become available.
+-    "numpy; python_version>='3.11'",
+-    "numpy; python_version>='3.8' and platform_python_implementation=='PyPy'",
++    "numpy",
+ ]