da87b8a1d5
Port changes: * Moved to github * It now installs itself * It uses yaggo during build
64 lines
2.6 KiB
Plaintext
64 lines
2.6 KiB
Plaintext
bin/annotate
|
|
bin/combineMUMs
|
|
bin/delta-filter
|
|
bin/dnadiff
|
|
bin/exact-tandems
|
|
bin/mummer
|
|
bin/mummerplot
|
|
bin/nucmer
|
|
bin/promer
|
|
bin/repeat-match
|
|
bin/show-aligns
|
|
bin/show-coords
|
|
bin/show-diff
|
|
bin/show-snps
|
|
bin/show-tiling
|
|
include/mummer-4.0.0beta2/include/compactsufsort/compactsufsort.hpp
|
|
include/mummer-4.0.0beta2/include/compactsufsort/compactsufsort_imp.hpp
|
|
include/mummer-4.0.0beta2/include/compactsufsort/const_iterator_traits.hpp
|
|
include/mummer-4.0.0beta2/include/compactsufsort/divsufsort_private.h
|
|
include/mummer-4.0.0beta2/include/compactsufsort/said_traits.hpp
|
|
include/mummer-4.0.0beta2/include/compactsufsort/sssort_imp.hpp
|
|
include/mummer-4.0.0beta2/include/compactsufsort/trsort_imp.hpp
|
|
include/mummer-4.0.0beta2/include/jellyfish/circular_buffer.hpp
|
|
include/mummer-4.0.0beta2/include/jellyfish/cooperative_pool2.hpp
|
|
include/mummer-4.0.0beta2/include/jellyfish/cpp_array.hpp
|
|
include/mummer-4.0.0beta2/include/jellyfish/divisor.hpp
|
|
include/mummer-4.0.0beta2/include/jellyfish/stream_manager.hpp
|
|
include/mummer-4.0.0beta2/include/jellyfish/whole_sequence_parser.hpp
|
|
include/mummer-4.0.0beta2/include/mt_skip_list/common.hpp
|
|
include/mummer-4.0.0beta2/include/mt_skip_list/set.hpp
|
|
include/mummer-4.0.0beta2/include/mummer/48bit_index.hpp
|
|
include/mummer-4.0.0beta2/include/mummer/48bit_iterator.hpp
|
|
include/mummer-4.0.0beta2/include/mummer/const_iterator_traits.hpp
|
|
include/mummer-4.0.0beta2/include/mummer/delta.hh
|
|
include/mummer-4.0.0beta2/include/mummer/dset.hpp
|
|
include/mummer-4.0.0beta2/include/mummer/fasta.hpp
|
|
include/mummer-4.0.0beta2/include/mummer/mgaps.hh
|
|
include/mummer-4.0.0beta2/include/mummer/nucmer.hpp
|
|
include/mummer-4.0.0beta2/include/mummer/openmp_qsort.hpp
|
|
include/mummer-4.0.0beta2/include/mummer/postnuc.hh
|
|
include/mummer-4.0.0beta2/include/mummer/redirect_to_pager.hpp
|
|
include/mummer-4.0.0beta2/include/mummer/sparseSA.hpp
|
|
include/mummer-4.0.0beta2/include/mummer/sparseSA_imp.hpp
|
|
include/mummer-4.0.0beta2/include/mummer/sw_align.hh
|
|
include/mummer-4.0.0beta2/include/mummer/sw_alignscore.hh
|
|
include/mummer-4.0.0beta2/include/mummer/tigrinc.hh
|
|
include/mummer-4.0.0beta2/include/mummer/timer.hpp
|
|
include/mummer-4.0.0beta2/include/mummer/translate.hh
|
|
include/mummer-4.0.0beta2/include/thread_pipe.hpp
|
|
include/mummer-4.0.0beta2/include/thread_pipe/circular_buffer.hpp
|
|
include/mummer-4.0.0beta2/include/thread_pipe/cooperative_pool2.hpp
|
|
include/mummer-4.0.0beta2/include/thread_pipe/divisor.hpp
|
|
include/mummer-4.0.0beta2/include/thread_pipe/traits.hpp
|
|
lib/libumdmummer.so
|
|
lib/libumdmummer.so.0
|
|
lib/libumdmummer.so.0.0.0
|
|
lib/mummer/Foundation.pm
|
|
lib/mummer/tandem-repeat.awk
|
|
libdata/pkgconfig/mummer.pc
|
|
libexec/mummer/mgaps
|
|
libexec/mummer/postnuc
|
|
libexec/mummer/postpro
|
|
libexec/mummer/prepro
|