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efa63f6ba4
freebsd-ports/biology
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Pav Lucistnik efa63f6ba4 - Remove USE_GCC where it can be satisfied with base compiler on following 
FreeBSD versions: 5.3 and up, 6.x, 7.x, 8-CURRENT
2008-07-25 14:34:52 +00:00
..
adun - extened PORTSCOUT 2008-07-08 17:32:52 +00:00
ariadne
artemis Bump portrevision due to upgrade of devel/gettext. 2008-06-06 13:08:29 +00:00
avida
babel
belvu
biococoa Bump portrevision due to upgrade of devel/gettext. 2008-06-06 13:08:29 +00:00
biojava Bump portrevision due to upgrade of devel/gettext. 2008-06-06 13:08:29 +00:00
blast Remove always-false/true conditions based on OSVERSION 500000 2007-10-04 00:15:01 +00:00
blat - Remove USE_GCC where it can be satisfied with base compiler on following 2008-07-25 14:34:52 +00:00
boinc-simap Bump portrevision due to upgrade of devel/gettext. 2008-06-06 13:08:29 +00:00
chemeq Migration from bison 1.x to 2.x 2007-10-17 10:13:01 +00:00
clustalw - Update to 2.0.6 2008-04-29 12:58:52 +00:00
consed Teach the building cluster that these ports are not to be build 2008-05-25 23:05:10 +00:00
crimap
distribfold
dna-qc
dotter Umark BROKEN, stale distfile removed from ftp-master. 2008-01-27 11:26:35 +00:00
embassy - Update to 5.0.0 2008-04-13 07:22:42 +00:00
emboss - Replace SF with second working master site 2008-04-17 17:06:48 +00:00
fasta - Update mastersite. 2008-04-18 15:36:54 +00:00
fasta3 - Update to 35.3.6 2008-04-10 08:09:10 +00:00
fastdnaml
finchtv
fluctuate
garlic - Remove unneeded dependency from gtk12/gtk20 [1] 2008-04-19 17:56:05 +00:00
genpak - Remove duplicates from MAKE_ENV after inclusion of CC and CXX in default MAKE_ENV 2008-07-25 09:08:42 +00:00
gff2ps Bump portrevision due to upgrade of devel/gettext. 2008-06-06 13:08:29 +00:00
gmap
gperiodic Bump portrevision due to upgrade of devel/gettext. 2008-06-06 13:08:29 +00:00
grappa
hmmer
jalview Bump portrevision due to upgrade of devel/gettext. 2008-06-06 13:08:29 +00:00
kinemage - Remove unneeded dependency from gtk12/gtk20 [1] 2008-04-19 17:56:05 +00:00
L-Breeder Bump portrevision due to upgrade of devel/gettext. 2008-06-06 13:08:29 +00:00
lagan - Remove duplicates from MAKE_ENV after inclusion of CC and CXX in default MAKE_ENV 2008-07-25 09:08:42 +00:00
lamarc Update my ports to my freebsd address 2008-07-23 02:43:55 +00:00
libgenome - Fix fetch, update WWW 2008-06-18 19:12:59 +00:00
linux-foldingathome - Fix typo in WWW 2007-10-04 07:28:40 +00:00
lsysexp Bump portrevision due to upgrade of devel/gettext. 2008-06-06 13:08:29 +00:00
mafft - Chase fasta3 update 2008-04-01 22:24:51 +00:00
mapm3 MAPMAKER/EXP is a linkage analysis package designed to help construct primary 2008-04-06 04:49:05 +00:00
migrate - File was rerolled for a small bugfix. 2008-02-27 07:34:21 +00:00
molden - Mark BROKEN on -CURRENT: error: 'linkat' redeclared as different kind of symbol 2008-04-25 22:53:23 +00:00
mopac - Remove duplicates from MAKE_ENV after inclusion of CC and CXX in default MAKE_ENV 2008-07-25 09:08:42 +00:00
mrbayes - Update maintainer's email address 2008-05-17 16:52:34 +00:00
mummer MUMmer is a modular system for the rapid whole genome alignment of finished 2007-12-14 20:54:47 +00:00
muscle - Update maintainer's email address 2008-05-17 16:52:34 +00:00
ncbi-toolkit - Remove unneeded dependency from gtk12/gtk20 [1] 2008-04-19 17:56:05 +00:00
njplot - Update maintainer's email address 2008-05-17 16:52:34 +00:00
ortep3 - Remove unneeded dependency from gtk12/gtk20 [1] 2008-04-19 17:56:05 +00:00
p5-AcePerl Update my ports to my freebsd address 2008-07-23 02:43:55 +00:00
p5-Bio-ASN1-EntrezGene - Take advantage of CPAN macro from bsd.sites.mk, change ${MASTER_SITE_PERL_CPAN} to CPAN. 2008-04-17 14:30:31 +00:00
p5-Bio-Das - Update to 1.09 2008-05-31 13:46:14 +00:00
p5-Bio-Phylo Reset aaron's port maintainerships due to many maintainer-timeouts. 2008-04-29 05:27:09 +00:00
p5-bioperl - Take advantage of CPAN macro from bsd.sites.mk, change ${MASTER_SITE_PERL_CPAN} to CPAN. 2008-04-17 14:30:31 +00:00
p5-bioperl-devel - Mark BROKEN: missing cpan dependency (interactive loop) 2008-07-07 22:57:49 +00:00
p5-bioperl-run - Take advantage of CPAN macro from bsd.sites.mk, change ${MASTER_SITE_PERL_CPAN} to CPAN. 2008-04-17 14:30:31 +00:00
p5-bioperl-run-devel
paml
phd2fasta Teach the building cluster that these ports are not to be build 2008-05-25 23:05:10 +00:00
phrap Teach the building cluster that these ports are not to be build 2008-05-25 23:05:10 +00:00
phred Teach the building cluster that these ports are not to be build 2008-05-25 23:05:10 +00:00
phylip - Fix build depends 2008-06-09 13:01:30 +00:00
platon - Remove unneeded dependency from gtk12/gtk20 [1] 2008-04-19 17:56:05 +00:00
povchem
primer3 - Update to 1.1.3 2008-04-04 20:46:35 +00:00
protomol - Remove USE_GCC where it can be satisfied with base compiler on following 2008-07-25 14:34:52 +00:00
psi88
py-biopython - Update to 1.45 2008-07-04 02:53:15 +00:00
pymol - Add missing dependens 2008-03-27 11:20:17 +00:00
rasmol - Remove unneeded dependency from gtk12/gtk20 [1] 2008-04-19 17:56:05 +00:00
recombine
ruby-bio - Update to 1.1.0 2007-10-24 01:38:51 +00:00
seaview - Remove unneeded dependency from gtk12/gtk20 [1] 2008-04-19 17:56:05 +00:00
seqio - respect NOPORTEXAMPLES/NOPORTDOCS and fix plist 2008-07-12 06:28:25 +00:00
sim4
ssaha - Fix plist files installation. 2008-06-21 02:46:21 +00:00
t_coffee - Update to 5.68 2008-04-05 10:47:11 +00:00
tinker - Remove unneeded dependency from gtk12/gtk20 [1] 2008-04-19 17:56:05 +00:00
treepuzzle
treeviewx Bump portrevision due to upgrade of devel/gettext. 2008-06-06 13:08:29 +00:00
tRNAscan-SE - Update MASTER_SITES and WWW: line 2008-05-22 00:49:42 +00:00
wise
xdrawchem - Bump portrevision after openbabel update 2008-07-07 05:14:23 +00:00
xmolwt Bump portrevision due to upgrade of devel/gettext. 2008-06-06 13:08:29 +00:00
Makefile - Delete biology/nab port after being marked DEPRECATED for three months 2008-07-24 12:17:12 +00:00