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adun
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ariadne
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artemis
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Decommissioning java 1.5 (EOLed since October 2009):
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2012-12-10 11:25:27 +00:00 |
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avida
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- convert USE_CMAKE to USES
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2013-03-22 20:06:14 +00:00 |
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babel
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- Mark conflict with science/openbabel
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2012-12-11 14:24:51 +00:00 |
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biococoa
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biojava
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Remove hardcoded extract dependency on diablo-jdk16, directly use USE_ZIP
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2012-12-11 07:26:38 +00:00 |
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blast
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blat
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boinc-simap
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Remove compatibility with FreeBSD 7.X
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2013-03-06 23:31:58 +00:00 |
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chemeq
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Convert USE_BISON to USES= bison
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2013-03-08 11:32:11 +00:00 |
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clustalw
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consed
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crux
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- adoption of optionsNG
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2013-03-18 06:48:55 +00:00 |
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dotter
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- Mark broken checksum mismatch
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2013-03-25 01:41:31 +00:00 |
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embassy
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- adopt optionsNG
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2013-03-18 23:35:01 +00:00 |
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emboss
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fasta
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fasta3
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fastdnaml
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finchtv
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fluctuate
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garlic
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genpak
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gff2ps
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gmap
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gperiodic
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grappa
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hmmer
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iolib
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jalview
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Decommissioning java 1.5 (EOLed since October 2009):
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2012-12-10 11:25:27 +00:00 |
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lagan
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lamarc
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- Fix build with clang
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2012-12-03 11:27:47 +00:00 |
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libgenome
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libsbml
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- adoption of optionsNG
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2013-03-18 06:50:12 +00:00 |
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linux-foldingathome
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mafft
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mapm3
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migrate
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molden
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Update to 5.0.4
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2012-12-14 17:47:16 +00:00 |
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mopac
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mrbayes
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mummer
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muscle
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ncbi-toolkit
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- Update to 2012.06.20
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2013-03-14 05:27:58 +00:00 |
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njplot
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ortep3
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p5-AcePerl
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p5-Bio-ASN1-EntrezGene
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p5-Bio-Das
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Cleanup supporting perl version 5.8 and 5.10,
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2012-12-17 15:39:36 +00:00 |
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p5-Bio-Das-Lite
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p5-Bio-GFF3
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- Update to 1.5
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2012-12-16 04:22:15 +00:00 |
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p5-Bio-Glite
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For perl@ owned ports:
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2013-03-29 00:44:53 +00:00 |
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p5-Bio-Graphics
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Add missing item to pkg-plist reported by QAT but not reported by poudriere.
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2013-03-03 15:22:43 +00:00 |
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p5-Bio-MAGETAB
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For perl@ owned ports:
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2013-03-29 00:44:53 +00:00 |
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p5-Bio-NEXUS
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For perl@ owned ports:
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2013-03-29 00:44:53 +00:00 |
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p5-Bio-Phylo
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- Update to 0.52 [1]
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2013-02-16 14:58:51 +00:00 |
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p5-Bio-SCF
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p5-bioperl
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p5-bioperl-run
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paml
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phd2fasta
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phrap
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phred
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phylip
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phyml
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- Update to 20121109.
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2013-02-04 10:07:30 +00:00 |
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platon
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plink
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plinkseq
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Fix build with protobuf-2.5.0
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2013-03-21 14:09:22 +00:00 |
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povchem
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- remove empty files
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2013-02-15 08:57:19 +00:00 |
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primer3
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protomol
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- adoption of optionsNG
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2013-03-18 06:54:39 +00:00 |
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psi88
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py-biopython
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pycogent
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pyfasta
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pymol
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python-nexus
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rasmol
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recombine
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ruby-bio
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- adoption of optionsNG
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2013-03-18 06:55:42 +00:00 |
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seaview
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- Update to 4.4.1
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2013-03-26 01:08:40 +00:00 |
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seqan
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- convert USE_CMAKE to USES
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2013-03-22 20:06:14 +00:00 |
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seqio
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sim4
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ssaha
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t_coffee
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- Update to 9.03.
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2013-01-14 08:04:38 +00:00 |
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tinker
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- Update to 6.2.01
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2013-03-24 16:13:57 +00:00 |
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treepuzzle
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treeviewx
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tRNAscan-SE
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ugene
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Unbreak on 7.X and i386 systems.
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2013-02-25 13:00:15 +00:00 |
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velvet
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wise
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- Update to 2.4.1
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2013-03-02 14:50:25 +00:00 |
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xdrawchem
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- Strip header at request of original creator
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2013-01-27 05:55:20 +00:00 |
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xmolwt
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- Support CC properly
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2012-12-07 22:22:06 +00:00 |
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Makefile
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Add Unipro UGENE, a free open-source crowss-platform bioinformatics software.
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2013-02-23 04:50:48 +00:00 |
