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abyss
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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artemis
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avida
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babel
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bamtools
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bcftools
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bedtools
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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biococoa
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bolt-lmm
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PR: 239613
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2019-08-04 23:48:22 +00:00 |
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bowtie
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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bowtie2
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bwa
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canu
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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cd-hit
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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cdbfasta
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checkm
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biology/checkm: Update 1.0.16 -> 1.0.17
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2019-08-11 19:16:49 +00:00 |
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chemeq
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Mark BROKEN: unfetchable
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2019-08-04 08:31:22 +00:00 |
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clustal-omega
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clustalw
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consed
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cufflinks
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biology/cufflinks: Fix build on i386 by removing the hard-coded -m64
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2019-05-29 07:02:28 +00:00 |
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cytoscape
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ddocent
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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diamond
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biology/diamond: Update to version 0.9.25
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2019-08-04 23:35:15 +00:00 |
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dsr-pdb
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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emboss
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exonerate
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fasta
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fasta3
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fastahack
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fastdnaml
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fastool
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fastp
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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fastqc
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fasttree
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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fastx-toolkit
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figtree
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fluctuate
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freebayes
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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garlic
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gatk
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biology/gatk: Update 4.0.11.0 -> 4.1.2.0-43
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2019-07-26 18:03:08 +00:00 |
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gemma
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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gff2ps
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gmap
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Enable workaround for building on powerpc64.
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2019-06-21 11:15:08 +00:00 |
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gperiodic
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biology/gperiodic: upgrade 2.0.10 -> 3.0.3
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2019-08-11 17:29:10 +00:00 |
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graphlan
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grappa
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groopm
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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hhsuite
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biology/hhsuite: fix build on powerpc64
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2019-08-05 14:23:23 +00:00 |
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hisat2
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hmmer
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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htslib
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hyphy
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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igv
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biology/igv: Update 2.5.2 -> 2.5.3
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2019-06-01 20:49:20 +00:00 |
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infernal
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iolib
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iqtree
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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jalview
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jellyfish
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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kallisto
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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lagan
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lamarc
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libbigwig
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New port: biology/libbigwig: C library for handling bigWig files (containing genomic data)
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2019-07-11 17:05:22 +00:00 |
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libgtextutils
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libsbml
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Use USES=pathfix
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2019-06-22 21:48:14 +00:00 |
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linux-foldingathome
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Mark BROKEN: unfetchable
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2019-08-04 08:31:22 +00:00 |
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mafft
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mapm3
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migrate
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minimap2
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molden
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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mopac
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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mothur
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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mrbayes
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mummer
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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muscle
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ncbi-blast+
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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ncbi-cxx-toolkit
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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ncbi-toolkit
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Update security/nettle to 3.5.1
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2019-07-09 17:13:07 +00:00 |
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ngs-sdk
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Mark this port as not buildable on powerpc64:
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2019-06-25 12:17:04 +00:00 |
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p5-AcePerl
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p5-Bio-ASN1-EntrezGene
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p5-Bio-Cluster
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p5-Bio-Coordinate
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p5-Bio-Das
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p5-Bio-Das-Lite
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p5-Bio-FeatureIO
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p5-Bio-GFF3
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p5-Bio-Glite
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p5-Bio-Graphics
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p5-Bio-MAGETAB
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p5-Bio-NEXUS
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p5-Bio-Phylo
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p5-Bio-SCF
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p5-BioPerl
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Update to 1.007005 (1.7.5)
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2019-08-11 16:49:24 +00:00 |
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p5-BioPerl-Run
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p5-transdecoder
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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p5-TrimGalore
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paml
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pbbam
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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pbcopper
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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pbseqan
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pear-merger
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phrap
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phred
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phylip
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phyml
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plinkseq
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primer3
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prodigal
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prodigy-lig
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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protomol
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psi88
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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py-biom-format
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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py-biopython
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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py-bx-python
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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py-cutadapt
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py-dnaio
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py-fastTSNE
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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py-Genesis-PyAPI
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py-gffutils
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py-gtfparse
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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py-loompy
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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py-macs2
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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py-orange3-bioinformatics
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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py-orange3-single-cell
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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py-pyfaidx
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py-pysam
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py-xenaPython
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pycogent
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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pyfasta
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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python-nexus
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rainbow
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recombine
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ruby-bio
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rubygem-bio
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samtools
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seaview
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seqan
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seqan1
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seqan-apps
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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seqio
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seqtk
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seqtools
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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sim4
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slclust
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smithwaterman
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stacks
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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star
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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stringtie
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t_coffee
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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tabixpp
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treekin
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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treepuzzle
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trimadap
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trimmomatic
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tRNAscan-SE
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biology/tRNAscan-SE: Update to 2.0.3
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2019-06-08 01:31:18 +00:00 |
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ugene
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unanimity
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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vcflib
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vcftools
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velvet
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viennarna
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Bump PORTREVISION for ports depending on the canonical version of GCC
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2019-07-26 20:46:53 +00:00 |
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vsearch
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wise
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Makefile
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New port: biology/libbigwig: C library for handling bigWig files (containing genomic data)
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2019-07-11 17:05:22 +00:00 |
