| .. |
|
adun
|
Chase math/gsl update,
|
2009-12-01 20:33:45 +00:00 |
|
ariadne
|
|
|
|
artemis
|
|
|
|
avida
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
babel
|
|
|
|
belvu
|
|
|
|
biococoa
|
|
|
|
biojava
|
|
|
|
blast
|
|
|
|
blat
|
|
|
|
boinc-simap
|
- Annotate that 8.x no longer needs libmap hack
|
2009-10-01 07:34:28 +00:00 |
|
chemeq
|
|
|
|
clustalw
|
- Update to 2.0.12
|
2009-11-29 01:16:36 +00:00 |
|
consed
|
|
|
|
crimap
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
crux
|
|
|
|
distribfold
|
|
|
|
dna-qc
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
dotter
|
- broken checksum mismatch
|
2009-11-19 12:43:06 +00:00 |
|
embassy
|
|
|
|
emboss
|
|
|
|
fasta
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
fasta3
|
|
|
|
fastdnaml
|
|
|
|
finchtv
|
|
|
|
fluctuate
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
garlic
|
|
|
|
genpak
|
|
|
|
gff2ps
|
|
|
|
gmap
|
|
|
|
gperiodic
|
|
|
|
grappa
|
|
|
|
hmmer
|
|
|
|
iolib
|
|
|
|
jalview
|
|
|
|
kinemage
|
|
|
|
L-Breeder
|
|
|
|
lagan
|
|
|
|
lamarc
|
|
|
|
libgenome
|
|
|
|
libsbml
|
- Mark MAKE_JOBS_UNSAFE
|
2009-11-20 22:53:09 +00:00 |
|
linux-foldingathome
|
|
|
|
lsysexp
|
|
|
|
mafft
|
|
|
|
mapm3
|
- Mark MAKE_JOBS_UNSAFE
|
2009-11-20 22:53:09 +00:00 |
|
migrate
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
molden
|
|
|
|
mopac
|
- Update to 7.1.11
|
2009-12-22 11:25:15 +00:00 |
|
mrbayes
|
|
|
|
mummer
|
- Update my mail address to FreeBSD
|
2009-11-27 22:52:30 +00:00 |
|
muscle
|
|
|
|
ncbi-toolkit
|
|
|
|
njplot
|
|
|
|
ortep3
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
p5-AcePerl
|
- Turn over a bunch of p5- ports that change infrequently to perl@
|
2009-12-13 18:07:49 +00:00 |
|
p5-Bio-ASN1-EntrezGene
|
|
|
|
p5-Bio-Das
|
|
|
|
p5-Bio-Glite
|
|
|
|
p5-Bio-Graphics
|
- Update to 1.994
|
2009-12-11 08:02:53 +00:00 |
|
p5-Bio-MAGETAB
|
|
|
|
p5-Bio-NEXUS
|
|
|
|
p5-Bio-Phylo
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
p5-Bio-SCF
|
|
|
|
p5-bioperl
|
- Update to 1.6.1
|
2009-12-04 11:50:10 +00:00 |
|
p5-bioperl-run
|
|
|
|
paml
|
|
|
|
phd2fasta
|
|
|
|
phrap
|
|
|
|
phred
|
|
|
|
phylip
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
phyml
|
|
|
|
platon
|
|
|
|
povchem
|
|
|
|
primer3
|
- Update to 1.1.4
|
2009-12-18 02:55:57 +00:00 |
|
protomol
|
|
|
|
psi88
|
|
|
|
py-biopython
|
|
|
|
pycogent
|
- Update to 1.4
|
2009-12-17 06:51:53 +00:00 |
|
pyfasta
|
- Update to 0.3.7
|
2009-12-24 03:14:34 +00:00 |
|
pymol
|
|
|
|
rasmol
|
|
|
|
recombine
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
ruby-bio
|
|
|
|
seaview
|
|
|
|
seqio
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
sim4
|
|
|
|
ssaha
|
|
|
|
t_coffee
|
|
|
|
tinker
|
|
|
|
treepuzzle
|
|
|
|
treeviewx
|
|
|
|
tRNAscan-SE
|
|
|
|
velvet
|
Velvet is a de novo genomic assembler specially designed for short read
|
2009-11-07 01:23:59 +00:00 |
|
wise
|
|
|
|
xdrawchem
|
|
|
|
xmolwt
|
|
|
|
Makefile
|
pyfasta is a python module for fast, memory-efficient, pythonic
|
2009-11-18 05:53:17 +00:00 |
