..
adun
Chase math/gsl update,
2009-12-01 20:33:45 +00:00
ariadne
artemis
avida
For ports maintained by ports@FreeBSD.org, remove names and/or
2009-12-21 02:19:12 +00:00
babel
belvu
biococoa
biojava
blast
blat
boinc-simap
- Annotate that 8.x no longer needs libmap hack
2009-10-01 07:34:28 +00:00
chemeq
clustalw
- Update to 2.0.12
2009-11-29 01:16:36 +00:00
consed
crimap
For ports maintained by ports@FreeBSD.org, remove names and/or
2009-12-21 02:19:12 +00:00
crux
Update to Crux 1.2.0.
2009-09-19 17:58:13 +00:00
distribfold
dna-qc
For ports maintained by ports@FreeBSD.org, remove names and/or
2009-12-21 02:19:12 +00:00
dotter
- broken checksum mismatch
2009-11-19 12:43:06 +00:00
embassy
emboss
fasta
For ports maintained by ports@FreeBSD.org, remove names and/or
2009-12-21 02:19:12 +00:00
fasta3
fastdnaml
finchtv
fluctuate
For ports maintained by ports@FreeBSD.org, remove names and/or
2009-12-21 02:19:12 +00:00
garlic
genpak
gff2ps
gmap
gperiodic
grappa
hmmer
iolib
jalview
kinemage
L-Breeder
lagan
lamarc
libgenome
libsbml
- Mark MAKE_JOBS_UNSAFE
2009-11-20 22:53:09 +00:00
linux-foldingathome
lsysexp
mafft
mapm3
- Mark MAKE_JOBS_UNSAFE
2009-11-20 22:53:09 +00:00
migrate
For ports maintained by ports@FreeBSD.org, remove names and/or
2009-12-21 02:19:12 +00:00
molden
Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
2009-09-13 00:08:01 +00:00
mopac
- Mark MAKE_JOBS_UNSAFE
2009-11-18 22:39:55 +00:00
mrbayes
mummer
- Update my mail address to FreeBSD
2009-11-27 22:52:30 +00:00
muscle
ncbi-toolkit
njplot
ortep3
For ports maintained by ports@FreeBSD.org, remove names and/or
2009-12-21 02:19:12 +00:00
p5-AcePerl
- Turn over a bunch of p5- ports that change infrequently to perl@
2009-12-13 18:07:49 +00:00
p5-Bio-ASN1-EntrezGene
p5-Bio-Das
- Update to 1.14
2009-09-08 12:08:12 +00:00
p5-Bio-Glite
p5-Bio-Graphics
- Update to 1.994
2009-12-11 08:02:53 +00:00
p5-Bio-MAGETAB
p5-Bio-NEXUS
p5-Bio-Phylo
For ports maintained by ports@FreeBSD.org, remove names and/or
2009-12-21 02:19:12 +00:00
p5-Bio-SCF
Bio::SCF module allows you to read and update (in a restricted
2009-08-28 23:36:09 +00:00
p5-bioperl
- Update to 1.6.1
2009-12-04 11:50:10 +00:00
p5-bioperl-run
paml
phd2fasta
phrap
phred
phylip
For ports maintained by ports@FreeBSD.org, remove names and/or
2009-12-21 02:19:12 +00:00
phyml
platon
Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
2009-09-13 00:08:01 +00:00
povchem
primer3
- Update to 1.1.4
2009-12-18 02:55:57 +00:00
protomol
psi88
Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
2009-09-13 00:08:01 +00:00
py-biopython
- Update to 138038
2009-09-04 20:41:25 +00:00
pycogent
- Update to 1.4
2009-12-17 06:51:53 +00:00
pyfasta
- Update to 0.3.4
2009-12-16 12:48:04 +00:00
pymol
rasmol
recombine
For ports maintained by ports@FreeBSD.org, remove names and/or
2009-12-21 02:19:12 +00:00
ruby-bio
seaview
seqio
For ports maintained by ports@FreeBSD.org, remove names and/or
2009-12-21 02:19:12 +00:00
sim4
ssaha
t_coffee
tinker
Bump PORTREVISION for everything that sets USE_FORTRAN=yes which now
2009-09-13 00:08:01 +00:00
treepuzzle
treeviewx
tRNAscan-SE
velvet
Velvet is a de novo genomic assembler specially designed for short read
2009-11-07 01:23:59 +00:00
wise
xdrawchem
xmolwt
Makefile
pyfasta is a python module for fast, memory-efficient, pythonic
2009-11-18 05:53:17 +00:00