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freebsd-ports/science
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Martin Wilke 0483c27519 - Update to 2.44 
PR:		206253
Submitted by:	ports fury
2016-01-15 15:37:21 +00:00
..
2d-rewriter Cleanup GH_* and variables order. 2015-12-29 14:30:46 +00:00
afni - Update maintainer mail address 2015-12-11 08:48:56 +00:00
avogadro Convert LICENSE= "GPLxx # or later" to "GPLxx+" 2016-01-12 16:20:31 +00:00
bddsolve
bft
bodr
brian
buddy
cdcl
cdf Follow-up commit to r396576 since I've forgotten to fix some things: 2015-09-10 16:31:33 +00:00
cdo - Fix i386 build on FreeBSD 9.x 2015-11-11 16:51:31 +00:00
cgnslib - Update to 1.8.15 2015-05-24 08:10:28 +00:00
cgribex
checkmol Convert LICENSE= "GPLxx # or later" to "GPLxx+" 2016-01-12 16:20:31 +00:00
chemical-mime-data - Fix leftover files generated by shared-mime-info 2015-08-14 13:37:02 +00:00
chemtool
chemtool-devel
clhep science/clhep: Update version 2.2.0.6=>2.2.0.8 2015-06-17 08:34:24 +00:00
colt
crf++ MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
dcl
devisor - Switch to options helpers 2015-09-24 21:19:27 +00:00
dlpoly-classic - Update maintainer mail address 2015-12-11 08:48:56 +00:00
ecs - Update to 1.8.15 2015-05-24 08:10:28 +00:00
epte
fastcap
fasthenry
fisicalab Make all GNUstep ports install into the System domain so that the Local domain is available for stuff built from source. 2015-09-19 10:33:34 +00:00
fvcom - Update maintainer mail address 2015-12-11 08:48:56 +00:00
fvcom-mpi - Update maintainer mail address 2015-12-11 08:48:56 +00:00
fvm - Update to 1.8.15 2015-05-24 08:10:28 +00:00
gchemutils MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
getdp
ghemical Convert LICENSE= "GPLxx # or later" to "GPLxx+" 2016-01-12 16:20:31 +00:00
ghmm - Update to 0.9.r3 2015-09-18 06:16:31 +00:00
gnudatalanguage Upgrade to 0.9.6v2. 2016-01-07 20:48:42 +00:00
gramps Part 1 of adding USE_GNOME=intltool to ports that require it. 2015-08-02 20:23:55 +00:00
grib_api - Update to 1.13.1 2015-06-15 14:42:53 +00:00
gromacs - Update to 5.0.6 2015-08-16 21:31:41 +00:00
gsmc Reassign to hamradio@ 2015-08-18 20:37:35 +00:00
gtamsanalyzer Make all GNUstep ports install into the System domain so that the Local domain is available for stuff built from source. 2015-09-19 10:33:34 +00:00
gwyddion - Update to 2.44 2016-01-15 15:37:21 +00:00
h5utils - Update to 1.8.15 2015-05-24 08:10:28 +00:00
harminv
hdf Reformat port description text and split it into three paragraphs to improve 2015-09-10 17:11:12 +00:00
hdf5 - Convert to new test framework 2015-10-01 15:56:04 +00:00
hs-bio - Update The Glorious Glasgow Haskell Compiler to version 7.10.2 2015-08-20 23:02:14 +00:00
InsightToolkit science/InsightToolkit: update 4.8.1 -> 4.8.2 2015-11-26 10:45:58 +00:00
isaac-cfd
jmol Mark a few ports BROKEN: unfetchable 2015-11-09 12:59:03 +00:00
jstrack - Add empty directory to plist, sort plist 2015-09-09 14:53:30 +00:00
kalzium
kst2 Convert my ports to new options helpers 2015-08-25 10:03:08 +00:00
lamprop
libctl
libghemical
libint - Update to version 1.1.6 2015-10-24 17:55:23 +00:00
libkml - Update BUILD_DEPENDS: remove redundant LOCALBASE/bin 2015-11-04 20:17:14 +00:00
liblinear - Switch to options helpers 2015-09-25 11:50:47 +00:00
liboglappth Remove trailing whitespace from Makefiles, M-X. 2015-10-08 15:12:22 +00:00
libquantum Convert LICENSE= "GPLxx # or later" to "GPLxx+" 2016-01-12 16:20:31 +00:00
libsvm Cleanup DIST* variables. 2015-05-11 18:34:57 +00:00
libsvm-python
libxc Add a port of Libxc, a library of exchange-correlation functionals for 2015-10-26 10:10:10 +00:00
linsmith Convert LICENSE= "GPLxx # or later" to "GPLxx+" 2016-01-12 16:20:31 +00:00
massxpert Drop USES=iconv. 2015-09-11 09:43:07 +00:00
mbdyn
mcstas - Remove unneeded @dir's 2015-12-23 20:39:53 +00:00
mcstas-comps science/mcstats[-comps]: update 2.1 -> 2.2a 2015-11-12 02:29:59 +00:00
medit Fix ports that confused the meaning of WRKDIR and WRKSRC. 2015-11-05 12:36:25 +00:00
meep Fix build. Options helpers cannot be used here. 2015-08-03 17:55:15 +00:00
mei
metaf2xml science/metaf2xml: update 1.57 -> 1.58 2016-01-04 13:49:17 +00:00
minc2 - Update to 1.8.15 2015-05-24 08:10:28 +00:00
mol2ps Convert LICENSE= "GPLxx # or later" to "GPLxx+" 2016-01-12 16:20:31 +00:00
mpb - Update to 1.8.15 2015-05-24 08:10:28 +00:00
mpqc - Add missing manpage 2015-10-01 07:04:30 +00:00
mpqc-mpich - Add missing manpage 2015-10-01 07:04:30 +00:00
ncs Upgrade ncs to 2.0.8 with its dependencies. 2015-05-14 17:31:29 +00:00
netcdf - Update BUILD_DEPENDS: remove redundant LOCALBASE/bin 2015-11-04 20:14:52 +00:00
netcdf-cxx - Use USES=localbase 2015-10-19 20:21:01 +00:00
netcdf-fortran - Use USES=localbase 2015-10-19 20:21:05 +00:00
nifticlib - Update maintainer mail address 2015-12-11 08:48:56 +00:00
openbabel Convert my ports to new options helpers 2015-08-25 10:03:08 +00:00
openkim - Update maintainer mail address 2015-12-11 08:48:56 +00:00
orthanc Upgrade to upstream version 0.9.4 2015-09-28 13:38:59 +00:00
orthanc-dicomweb This plugin extends the RESTful API of Orthanc with WADO and DICOMweb 2015-10-06 15:54:48 +00:00
orthanc-postgresql - Update from 1.2 to 1.3, fix build 2015-10-07 13:02:02 +00:00
orthanc-webviewer - Update to 1.2 2015-08-17 09:17:56 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES - Fix shebangs 2015-05-28 18:15:01 +00:00
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok Make it so that the default Perl is always called perl5. 2015-09-14 12:19:48 +00:00
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR Make it so that the default Perl is always called perl5. 2015-09-14 12:19:48 +00:00
p5-Geo-Coordinates-Converter MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
p5-Geo-Coordinates-Converter-iArea - Add NO_ARCH 2015-10-03 17:11:36 +00:00
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS - Update to 0.103 2015-10-10 00:11:24 +00:00
p5-Mcstas-Tools Add new port p5-Mcstas-Tools, a general tool for simulating neutron scattering instruments and experiments 2015-11-20 23:34:39 +00:00
p5-PerlMol
p5-Physics-Unit Make it so that the default Perl is always called perl5. 2015-09-14 12:19:48 +00:00
paje Make all GNUstep ports install into the System domain so that the Local domain is available for stuff built from source. 2015-09-19 10:33:34 +00:00
paraview Convert to USES=jpeg 2015-06-22 18:33:20 +00:00
pnetcdf - Update to 1.10.0 2015-09-17 02:58:01 +00:00
psychopy Convert LICENSE= "GPLxx # or later" to "GPLxx+" 2016-01-12 16:20:31 +00:00
pulseview - Bump PORTREVISION after libzip update 2015-08-28 10:48:41 +00:00
py-cdo - Update RUN_DEPENDS: remove redundant LOCALBASE/bin 2015-11-04 20:14:57 +00:00
py-coards
py-DendroPy Update to 4.0.3 2015-12-25 12:30:50 +00:00
py-h5py - Update to 2.5.0 2015-12-11 20:19:10 +00:00
py-hcluster - Add LICENSE 2015-09-14 12:20:09 +00:00
py-mdp Remove UNIQUENAME and LATEST_LINK. 2015-08-17 14:20:40 +00:00
py-mlpy
py-netCDF4 - Update to 1.8.15 2015-05-24 08:10:28 +00:00
py-obspy - Update to 0.10.2 2015-09-13 07:02:47 +00:00
py-paida
py-pupynere
py-pyaixi - Update to 1.0.4 2015-12-10 13:59:33 +00:00
py-pydap - Mark BROKEN: does not build: 2015-08-10 20:00:30 +00:00
py-pydicom - Fix shebangs 2015-06-05 21:10:18 +00:00
py-pysal - Update to 1.10.0 2015-10-04 17:59:41 +00:00
py-pyteomics Rename my ports to comply with Python ports policy 2015-11-02 09:24:50 +00:00
py-pyteomics.biolccc Rename my ports to comply with Python ports policy 2015-11-02 09:24:50 +00:00
py-scikit-fuzzy Fuzzy logic toolkit for SciPy. 2015-12-31 13:41:14 +00:00
py-scikit-learn Update to version 0.17. 2015-12-07 12:05:17 +00:00
py-scikit-sparse - Fix build when using python 3.x 2015-07-26 15:11:39 +00:00
py-scimath
py-scipy - Update to 0.16.1 2015-11-09 18:44:23 +00:00
py-ws2300 - Add missing files to plist 2015-06-05 21:10:48 +00:00
pybrain Update ports in the s* categores to not use GH_COMMIT. 2015-05-07 17:41:23 +00:00
pycdf - Strip library 2015-06-03 16:51:58 +00:00
pynn - Update to 0.8.0 2015-12-11 00:44:01 +00:00
qcl Convert LICENSE= "GPLxx # or later" to "GPLxx+" 2016-01-12 16:20:31 +00:00
qtresistors
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk - Add new port: science/R-cran-cmprsk 2015-11-08 05:46:50 +00:00
R-cran-DCluster - Update to 0.2-7 2015-06-13 05:45:48 +00:00
R-cran-e1071 - Update to 1.6-7 2015-08-08 07:13:44 +00:00
R-cran-eco
R-cran-Epi - Update to 1.1.71 2015-11-08 06:46:59 +00:00
R-cran-epicalc
R-cran-etm - Add new port: science/R-cran-etm 2015-11-08 06:15:14 +00:00
R-cran-snow - Update to 0.4-1 2015-12-06 11:01:46 +00:00
R-cran-som
rubygem-ai4r Set NO_ARCH for remaining rubygem-* ports with no arch dependent files 2015-07-02 16:01:06 +00:00
rubygem-cdo - Update to 1.2.7 2015-11-20 22:47:14 +00:00
rubygem-ruby-dcl
rubygem-ruby-netcdf - Move science/rubygem-netcdf to science/rubygem-ruby-netcdf 2015-05-24 15:35:51 +00:00
sigrok-cli - Bump PORTREVISION after libzip update 2015-08-28 10:48:41 +00:00
sigrok-firmware Update ports in the s* categores to not use GH_COMMIT. 2015-05-07 17:41:23 +00:00
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo - Update to 1.8.15 2015-05-24 08:10:28 +00:00
simlib - Strip library 2015-05-17 14:43:37 +00:00
simsmith MASTER_SITES cleanup. 2015-05-14 10:15:04 +00:00
step
svmlight
szip - Convert to new test framework 2015-10-01 15:56:21 +00:00
udunits - Update to 2.2.20 2015-10-27 15:50:25 +00:00
v_sim Part 1 of adding USE_GNOME=intltool to ports that require it. 2015-08-02 20:23:55 +00:00
veusz
vmd
voro++ - Update maintainer mail address 2015-12-11 08:48:56 +00:00
xfce4-equake-plugin - Update to 1.3.8 2015-08-19 04:38:46 +00:00
xmakemol
Makefile Fuzzy logic toolkit for SciPy. 2015-12-31 13:41:14 +00:00