984 lines
43 KiB
Plaintext
984 lines
43 KiB
Plaintext
act-1.0/CVS/Root
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act-1.0/CVS/Repository
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act-1.0/CVS/Entries
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act-1.0/.cvsignore
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act-1.0/AppGlobal.java
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act-1.0/Dad.java
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act-1.0/Makefile
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act-1.0/act
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act-1.0/META-INF/CVS/Root
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act-1.0/META-INF/CVS/Repository
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act-1.0/META-INF/CVS/Entries
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act-1.0/META-INF/MANIFEST.MF
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act-1.0/uk/CVS/Root
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act-1.0/uk/CVS/Repository
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act-1.0/uk/CVS/Entries
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act-1.0/uk/ac/CVS/Root
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act-1.0/uk/ac/CVS/Repository
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act-1.0/uk/ac/CVS/Entries
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act-1.0/uk/ac/sanger/CVS/Root
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act-1.0/uk/ac/sanger/CVS/Repository
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act-1.0/uk/ac/sanger/CVS/Entries
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act-1.0/uk/ac/sanger/pathogens/CVS/Root
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act-1.0/uk/ac/sanger/pathogens/CVS/Repository
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act-1.0/uk/ac/sanger/pathogens/CVS/Entries
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act-1.0/uk/ac/sanger/pathogens/Document.java
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act-1.0/uk/ac/sanger/pathogens/FastVector.java
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act-1.0/uk/ac/sanger/pathogens/FileDocument.java
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act-1.0/uk/ac/sanger/pathogens/FileProgressDocument.java
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act-1.0/uk/ac/sanger/pathogens/InputStreamProgressEvent.java
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act-1.0/uk/ac/sanger/pathogens/InputStreamProgressListener.java
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act-1.0/uk/ac/sanger/pathogens/OutOfRangeException.java
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act-1.0/uk/ac/sanger/pathogens/ProgressInputStream.java
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act-1.0/uk/ac/sanger/pathogens/ReadOnlyException.java
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act-1.0/uk/ac/sanger/pathogens/StringVector.java
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act-1.0/uk/ac/sanger/pathogens/URLDocument.java
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act-1.0/uk/ac/sanger/pathogens/embl/CVS/Root
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act-1.0/uk/ac/sanger/pathogens/embl/CVS/Repository
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act-1.0/uk/ac/sanger/pathogens/embl/CVS/Entries
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act-1.0/uk/ac/sanger/pathogens/embl/BetweenRange.java
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act-1.0/uk/ac/sanger/pathogens/embl/ComparableFeature.java
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act-1.0/uk/ac/sanger/pathogens/embl/CorbaEntry.java
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act-1.0/uk/ac/sanger/pathogens/embl/CorbaFeature.java
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act-1.0/uk/ac/sanger/pathogens/embl/CorbaSequence.java
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act-1.0/uk/ac/sanger/pathogens/embl/DateStampFeature.java
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act-1.0/uk/ac/sanger/pathogens/embl/DocumentEntry.java
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act-1.0/uk/ac/sanger/pathogens/embl/DocumentEntryAutosaveThread.java
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act-1.0/uk/ac/sanger/pathogens/embl/DocumentEntryFactory.java
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act-1.0/uk/ac/sanger/pathogens/embl/DocumentFeature.java
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act-1.0/uk/ac/sanger/pathogens/embl/EMBLObject.java
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act-1.0/uk/ac/sanger/pathogens/embl/Entry.java
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act-1.0/uk/ac/sanger/pathogens/embl/EmblDocumentEntry.java
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act-1.0/uk/ac/sanger/pathogens/embl/EmblMisc.java
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act-1.0/uk/ac/sanger/pathogens/embl/EmblStreamFeature.java
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act-1.0/uk/ac/sanger/pathogens/embl/EmblStreamSequence.java
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act-1.0/uk/ac/sanger/pathogens/embl/EnsemblCorbaEntry.java
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act-1.0/uk/ac/sanger/pathogens/embl/EnsemblCorbaFeature.java
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act-1.0/uk/ac/sanger/pathogens/embl/EnsemblCorbaSequence.java
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act-1.0/uk/ac/sanger/pathogens/embl/EntryInformation.java
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act-1.0/uk/ac/sanger/pathogens/embl/EntryInformationException.java
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act-1.0/uk/ac/sanger/pathogens/embl/FastaStreamSequence.java
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act-1.0/uk/ac/sanger/pathogens/embl/Feature.java
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act-1.0/uk/ac/sanger/pathogens/embl/FeatureComparator.java
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act-1.0/uk/ac/sanger/pathogens/embl/Key.java
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act-1.0/uk/ac/sanger/pathogens/embl/FeatureEnumeration.java
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act-1.0/uk/ac/sanger/pathogens/embl/FeatureHeader.java
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act-1.0/uk/ac/sanger/pathogens/embl/FeatureTable.java
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act-1.0/uk/ac/sanger/pathogens/embl/FeatureTree.java
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act-1.0/uk/ac/sanger/pathogens/embl/FeatureVector.java
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act-1.0/uk/ac/sanger/pathogens/embl/FuzzyRange.java
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act-1.0/uk/ac/sanger/pathogens/embl/GFFDocumentEntry.java
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act-1.0/uk/ac/sanger/pathogens/embl/GFFMisc.java
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act-1.0/uk/ac/sanger/pathogens/embl/GFFEntryInformation.java
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act-1.0/uk/ac/sanger/pathogens/embl/GFFStreamFeature.java
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act-1.0/uk/ac/sanger/pathogens/embl/GenbankDocumentEntry.java
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act-1.0/uk/ac/sanger/pathogens/embl/GenbankMisc.java
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act-1.0/uk/ac/sanger/pathogens/embl/GenbankStreamFeature.java
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act-1.0/uk/ac/sanger/pathogens/embl/GenbankStreamSequence.java
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act-1.0/uk/ac/sanger/pathogens/embl/InvalidKeyException.java
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act-1.0/uk/ac/sanger/pathogens/embl/InvalidQualifierException.java
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act-1.0/uk/ac/sanger/pathogens/embl/InvalidRelationException.java
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act-1.0/uk/ac/sanger/pathogens/embl/KeyVector.java
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act-1.0/uk/ac/sanger/pathogens/embl/LineGroup.java
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act-1.0/uk/ac/sanger/pathogens/embl/LineGroupVector.java
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act-1.0/uk/ac/sanger/pathogens/embl/LinePushBackReader.java
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act-1.0/uk/ac/sanger/pathogens/embl/Location.java
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act-1.0/uk/ac/sanger/pathogens/embl/LocationLexer.java
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act-1.0/uk/ac/sanger/pathogens/embl/Qualifier.java
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act-1.0/uk/ac/sanger/pathogens/embl/LocationParseException.java
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act-1.0/uk/ac/sanger/pathogens/embl/LocationParseNode.java
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act-1.0/uk/ac/sanger/pathogens/embl/LocationParseNodeVector.java
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act-1.0/uk/ac/sanger/pathogens/embl/LowerInteger.java
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act-1.0/uk/ac/sanger/pathogens/embl/MSPcrunchDocumentEntry.java
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act-1.0/uk/ac/sanger/pathogens/embl/MSPcrunchEntryInformation.java
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act-1.0/uk/ac/sanger/pathogens/embl/MSPcrunchStreamFeature.java
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act-1.0/uk/ac/sanger/pathogens/embl/MiscLineGroup.java
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act-1.0/uk/ac/sanger/pathogens/embl/OutOfDateException.java
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act-1.0/uk/ac/sanger/pathogens/embl/PublicDBDocumentEntry.java
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act-1.0/uk/ac/sanger/pathogens/embl/PublicDBStreamFeature.java
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act-1.0/uk/ac/sanger/pathogens/embl/PushBackException.java
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act-1.0/uk/ac/sanger/pathogens/embl/QualifierInfo.java
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act-1.0/uk/ac/sanger/pathogens/embl/QualifierInfoException.java
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act-1.0/uk/ac/sanger/pathogens/embl/QualifierInfoVector.java
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act-1.0/uk/ac/sanger/pathogens/embl/QualifierParseException.java
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act-1.0/uk/ac/sanger/pathogens/embl/QualifierVector.java
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act-1.0/uk/ac/sanger/pathogens/embl/RWCorbaEntry.java
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act-1.0/uk/ac/sanger/pathogens/embl/RWCorbaFeature.java
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act-1.0/uk/ac/sanger/pathogens/embl/Range.java
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act-1.0/uk/ac/sanger/pathogens/embl/RangeVector.java
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act-1.0/uk/ac/sanger/pathogens/embl/RawStreamSequence.java
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act-1.0/uk/ac/sanger/pathogens/embl/ReadFormatException.java
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act-1.0/uk/ac/sanger/pathogens/embl/ReadOnlyEntry.java
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act-1.0/uk/ac/sanger/pathogens/embl/Sequence.java
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act-1.0/uk/ac/sanger/pathogens/embl/SimpleDocumentEntry.java
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act-1.0/uk/ac/sanger/pathogens/embl/SimpleDocumentFeature.java
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act-1.0/uk/ac/sanger/pathogens/embl/SimpleEntryInformation.java
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act-1.0/uk/ac/sanger/pathogens/embl/StreamFeature.java
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act-1.0/uk/ac/sanger/pathogens/embl/StreamFeatureTable.java
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act-1.0/uk/ac/sanger/pathogens/embl/StreamQualifier.java
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act-1.0/uk/ac/sanger/pathogens/embl/StreamSequence.java
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act-1.0/uk/ac/sanger/pathogens/embl/StreamSequenceFactory.java
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act-1.0/uk/ac/sanger/pathogens/embl/UpperInteger.java
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act-1.0/uk/ac/sanger/pathogens/embl/embl.example
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act-1.0/uk/ac/sanger/pathogens/embl/QualifierInfoVector.class
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act-1.0/uk/ac/sanger/pathogens/embl/QualifierInfoException.class
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act-1.0/uk/ac/sanger/pathogens/embl/EntryInformation.class
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act-1.0/uk/ac/sanger/pathogens/embl/EntryInformationException.class
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act-1.0/uk/ac/sanger/pathogens/embl/ReadFormatException.class
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act-1.0/uk/ac/sanger/pathogens/embl/InvalidRelationException.class
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act-1.0/uk/ac/sanger/pathogens/embl/DocumentEntryFactory.class
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act-1.0/uk/ac/sanger/pathogens/embl/SimpleEntryInformation.class
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act-1.0/uk/ac/sanger/pathogens/embl/QualifierInfo.class
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act-1.0/uk/ac/sanger/pathogens/embl/Key.class
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act-1.0/uk/ac/sanger/pathogens/embl/KeyVector.class
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act-1.0/uk/ac/sanger/pathogens/embl/Qualifier.class
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act-1.0/uk/ac/sanger/pathogens/embl/DocumentEntry.class
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act-1.0/uk/ac/sanger/pathogens/embl/Entry.class
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act-1.0/uk/ac/sanger/pathogens/embl/EmblDocumentEntry.class
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act-1.0/uk/ac/sanger/pathogens/embl/PublicDBDocumentEntry.class
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act-1.0/uk/ac/sanger/pathogens/embl/SimpleDocumentEntry.class
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act-1.0/uk/ac/sanger/pathogens/embl/SimpleDocumentEntry$1.class
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act-1.0/uk/ac/sanger/pathogens/embl/LineGroup.class
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act-1.0/uk/ac/sanger/pathogens/embl/EMBLObject.class
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act-1.0/uk/ac/sanger/pathogens/embl/LinePushBackReader.class
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act-1.0/uk/ac/sanger/pathogens/embl/PushBackException.class
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act-1.0/uk/ac/sanger/pathogens/embl/StreamSequenceFactory.class
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act-1.0/uk/ac/sanger/pathogens/embl/StreamSequence.class
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act-1.0/uk/ac/sanger/pathogens/embl/Sequence.class
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act-1.0/uk/ac/sanger/pathogens/embl/EmblStreamFeature.class
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act-1.0/uk/ac/sanger/pathogens/embl/PublicDBStreamFeature.class
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act-1.0/uk/ac/sanger/pathogens/embl/SimpleDocumentFeature.class
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act-1.0/uk/ac/sanger/pathogens/embl/DocumentFeature.class
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act-1.0/uk/ac/sanger/pathogens/embl/Feature.class
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act-1.0/uk/ac/sanger/pathogens/embl/StreamFeature.class
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act-1.0/uk/ac/sanger/pathogens/embl/ComparableFeature.class
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act-1.0/uk/ac/sanger/pathogens/embl/QualifierParseException.class
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act-1.0/uk/ac/sanger/pathogens/embl/FeatureHeader.class
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act-1.0/uk/ac/sanger/pathogens/embl/EmblMisc.class
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act-1.0/uk/ac/sanger/pathogens/embl/MiscLineGroup.class
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act-1.0/uk/ac/sanger/pathogens/embl/GenbankStreamFeature.class
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act-1.0/uk/ac/sanger/pathogens/embl/GFFStreamFeature.class
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act-1.0/uk/ac/sanger/pathogens/embl/MSPcrunchStreamFeature.class
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act-1.0/uk/ac/sanger/pathogens/embl/GenbankMisc.class
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act-1.0/uk/ac/sanger/pathogens/embl/GFFMisc.class
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act-1.0/uk/ac/sanger/pathogens/embl/GFFDocumentEntry.class
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act-1.0/uk/ac/sanger/pathogens/embl/GenbankDocumentEntry.class
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act-1.0/uk/ac/sanger/pathogens/embl/MSPcrunchDocumentEntry.class
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act-1.0/uk/ac/sanger/pathogens/embl/InvalidKeyException.class
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act-1.0/uk/ac/sanger/pathogens/embl/InvalidQualifierException.class
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act-1.0/uk/ac/sanger/pathogens/embl/Range.class
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act-1.0/uk/ac/sanger/pathogens/embl/EmblStreamSequence.class
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act-1.0/uk/ac/sanger/pathogens/embl/RangeVector.class
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act-1.0/uk/ac/sanger/pathogens/embl/Location.class
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act-1.0/uk/ac/sanger/pathogens/embl/LocationLexer.class
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act-1.0/uk/ac/sanger/pathogens/embl/LocationLexer$TokenEnumeration.class
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act-1.0/uk/ac/sanger/pathogens/embl/LocationParseException.class
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act-1.0/uk/ac/sanger/pathogens/embl/QualifierVector.class
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act-1.0/uk/ac/sanger/pathogens/embl/FeatureEnumeration.class
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act-1.0/uk/ac/sanger/pathogens/embl/FeatureVector.class
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act-1.0/uk/ac/sanger/pathogens/embl/GenbankStreamSequence.class
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act-1.0/uk/ac/sanger/pathogens/embl/LineGroupVector.class
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act-1.0/uk/ac/sanger/pathogens/embl/FeatureTable.class
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act-1.0/uk/ac/sanger/pathogens/embl/RawStreamSequence.class
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act-1.0/uk/ac/sanger/pathogens/embl/FastaStreamSequence.class
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act-1.0/uk/ac/sanger/pathogens/embl/StreamFeatureTable.class
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act-1.0/uk/ac/sanger/pathogens/embl/DocumentEntryAutosaveThread.class
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act-1.0/uk/ac/sanger/pathogens/embl/LocationParseNode.class
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act-1.0/uk/ac/sanger/pathogens/embl/StreamQualifier.class
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act-1.0/uk/ac/sanger/pathogens/embl/GFFEntryInformation.class
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act-1.0/uk/ac/sanger/pathogens/embl/MSPcrunchEntryInformation.class
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act-1.0/uk/ac/sanger/pathogens/embl/LowerInteger.class
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act-1.0/uk/ac/sanger/pathogens/embl/UpperInteger.class
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act-1.0/uk/ac/sanger/pathogens/embl/FuzzyRange.class
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act-1.0/uk/ac/sanger/pathogens/embl/OutOfDateException.class
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act-1.0/uk/ac/sanger/pathogens/embl/DateStampFeature.class
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act-1.0/uk/ac/sanger/pathogens/embl/LocationParseNodeVector.class
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act-1.0/uk/ac/sanger/pathogens/embl/BetweenRange.class
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act-1.0/uk/ac/sanger/pathogens/embl/FeatureTree.class
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act-1.0/uk/ac/sanger/pathogens/embl/FeatureTree$FeatureEnumerator.class
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act-1.0/uk/ac/sanger/pathogens/embl/FeatureComparator.class
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act-1.0/uk/ac/sanger/pathogens/OutOfRangeException.class
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act-1.0/uk/ac/sanger/pathogens/StringVector.class
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act-1.0/uk/ac/sanger/pathogens/StringVector$1.class
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act-1.0/uk/ac/sanger/pathogens/ReadOnlyException.class
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act-1.0/uk/ac/sanger/pathogens/Document.class
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act-1.0/uk/ac/sanger/pathogens/InputStreamProgressListener.class
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act-1.0/uk/ac/sanger/pathogens/FileDocument.class
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act-1.0/uk/ac/sanger/pathogens/InputStreamProgressEvent.class
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act-1.0/uk/ac/sanger/pathogens/FileProgressDocument.class
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act-1.0/uk/ac/sanger/pathogens/FastVector.class
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act-1.0/uk/ac/sanger/pathogens/ProgressInputStream.class
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act-1.0/diana/CVS/Root
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act-1.0/diana/CVS/Repository
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act-1.0/diana/CVS/Entries
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act-1.0/diana/AlignMatch.java
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act-1.0/diana/AlignMatchVector.java
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act-1.0/diana/ChangeEvent.java
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act-1.0/diana/ChangeListener.java
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act-1.0/diana/ClipBoard.java
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act-1.0/diana/ComparisonData.java
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act-1.0/diana/ComparisonDataFactory.java
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act-1.0/diana/ComparisonDataParseException.java
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act-1.0/diana/Entry.java
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act-1.0/diana/EntryChangeEvent.java
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act-1.0/diana/EntryChangeListener.java
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act-1.0/diana/EntryGroup.java
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act-1.0/diana/EntryGroupChangeEvent.java
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act-1.0/diana/EntryGroupChangeListener.java
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act-1.0/diana/EntrySource.java
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act-1.0/diana/plot/CVS/Root
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act-1.0/diana/plot/CVS/Repository
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act-1.0/diana/plot/CVS/Entries
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act-1.0/diana/plot/AGWindowAlgorithm.java
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act-1.0/diana/plot/ATDeviationAlgorithm.java
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act-1.0/diana/plot/Algorithm.java
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act-1.0/diana/plot/BaseAlgorithm.java
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act-1.0/diana/plot/Codon12CorrelationAlgorithm.java
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act-1.0/diana/plot/CodonUsageAlgorithm.java
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act-1.0/diana/plot/CodonUsageFormatException.java
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act-1.0/diana/plot/CodonUsageWeight.java
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act-1.0/diana/plot/CodonWeight.java
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act-1.0/diana/plot/CoilFeatureAlgorithm.java
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act-1.0/diana/plot/HydroAlgorithm.java
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act-1.0/diana/plot/FeatureAlgorithm.java
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act-1.0/diana/plot/GCDeviationAlgorithm.java
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act-1.0/diana/plot/GCFrameAlgorithm.java
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act-1.0/diana/plot/GCSDWindowAlgorithm.java
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act-1.0/diana/plot/GCWindowAlgorithm.java
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act-1.0/diana/plot/HydrophilicityAlgorithm.java
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act-1.0/diana/plot/HydrophobicityAlgorithm.java
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act-1.0/diana/plot/UserDataAlgorithm.java
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act-1.0/diana/plot/BaseAlgorithm.class
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act-1.0/diana/plot/Algorithm.class
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act-1.0/diana/plot/Codon12CorrelationAlgorithm.class
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act-1.0/diana/plot/GCWindowAlgorithm.class
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act-1.0/diana/plot/GCSDWindowAlgorithm.class
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act-1.0/diana/plot/AGWindowAlgorithm.class
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act-1.0/diana/plot/GCFrameAlgorithm.class
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act-1.0/diana/plot/GCDeviationAlgorithm.class
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act-1.0/diana/plot/ATDeviationAlgorithm.class
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act-1.0/diana/plot/UserDataAlgorithm.class
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act-1.0/diana/plot/CodonUsageAlgorithm.class
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act-1.0/diana/plot/CodonUsageWeight.class
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act-1.0/diana/plot/CodonWeight.class
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act-1.0/diana/plot/FeatureAlgorithm.class
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act-1.0/diana/plot/HydrophobicityAlgorithm.class
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act-1.0/diana/plot/HydroAlgorithm.class
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act-1.0/diana/plot/HydrophilicityAlgorithm.class
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act-1.0/diana/plot/CoilFeatureAlgorithm.class
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act-1.0/diana/plot/CodonUsageFormatException.class
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act-1.0/diana/EntrySourceVector.java
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act-1.0/diana/EntryVector.java
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act-1.0/diana/ExternalApplication.java
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act-1.0/diana/ExternalProgram.java
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act-1.0/diana/ExternalProgramException.java
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act-1.0/diana/ExternalProgramVector.java
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act-1.0/diana/ExternalSearchProgram.java
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act-1.0/diana/Feature.java
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act-1.0/diana/FeatureChangeEvent.java
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act-1.0/diana/FeatureChangeListener.java
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act-1.0/diana/FeatureEnumeration.java
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act-1.0/diana/FeatureFromVectorPredicate.java
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act-1.0/diana/FeatureKeyPredicate.java
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act-1.0/diana/FeatureKeyQualifierPredicate.java
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act-1.0/diana/FeatureSegment.java
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act-1.0/diana/FeaturePredicate.java
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act-1.0/diana/FeatureSegmentVector.java
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act-1.0/diana/FeatureVector.java
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act-1.0/diana/FilteredEntryGroup.java
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act-1.0/diana/GotoEvent.java
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act-1.0/diana/GotoEventSource.java
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act-1.0/diana/GotoListener.java
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act-1.0/diana/LastSegmentException.java
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act-1.0/diana/Logger.java
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act-1.0/diana/MSPcrunchComparisonData.java
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act-1.0/diana/MUMmerComparisonData.java
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act-1.0/diana/Options.java
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act-1.0/diana/Selectable.java
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act-1.0/diana/Selection.java
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act-1.0/diana/SelectionChangeEvent.java
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act-1.0/diana/SelectionChangeListener.java
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act-1.0/diana/helix.gif
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act-1.0/diana/SimpleComparisonData.java
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act-1.0/diana/SimpleEntryGroup.java
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act-1.0/diana/SimpleGotoEventSource.java
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act-1.0/diana/sanger-centre.gif
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act-1.0/diana/components/CVS/Root
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act-1.0/diana/components/CVS/Repository
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act-1.0/diana/components/CVS/Entries
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act-1.0/diana/components/ActMain.java
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act-1.0/diana/components/AddMenu.java
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act-1.0/diana/components/AlignmentViewer.java
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act-1.0/diana/components/ArtemisMain.java
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act-1.0/diana/components/BasePlot.java
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act-1.0/diana/components/BasePlotGroup.java
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act-1.0/diana/components/CanvasPanel.java
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act-1.0/diana/components/Comparator.java
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act-1.0/diana/components/ComparatorDialog.java
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act-1.0/diana/components/CorbaEntrySource.java
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act-1.0/diana/components/DisplayAdjustmentEvent.java
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act-1.0/diana/components/DisplayAdjustmentListener.java
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act-1.0/diana/components/DisplayComponent.java
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act-1.0/diana/components/EMBLCorbaEntrySource.java
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act-1.0/diana/components/EditMenu.java
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act-1.0/diana/components/EnsemblEntrySource.java
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act-1.0/diana/components/EntryActionListener.java
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act-1.0/diana/components/EntryEdit.java
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act-1.0/diana/components/EntryEditVector.java
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act-1.0/diana/components/EntryFileDialog.java
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act-1.0/diana/components/EntryGroupDisplay.java
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act-1.0/diana/components/EntryGroupInfoDisplay.java
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act-1.0/diana/components/EntryGroupMenu.java
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act-1.0/diana/components/EntryGroupPanel.java
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act-1.0/diana/components/EntryHeaderEdit.java
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act-1.0/diana/components/ExternalProgramOptions.java
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act-1.0/diana/components/FeatureAminoAcidViewer.java
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act-1.0/diana/components/FeatureBaseViewer.java
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act-1.0/diana/components/FeatureDisplay.java
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act-1.0/diana/components/FeatureDisplayOwner.java
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act-1.0/diana/components/FeatureEdit.java
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act-1.0/diana/components/FeatureInfo.java
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act-1.0/diana/components/FeatureList.java
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act-1.0/diana/components/FeatureListFrame.java
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act-1.0/diana/components/FeaturePlot.java
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act-1.0/diana/components/FeaturePlotGroup.java
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act-1.0/diana/components/FeaturePopup.java
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act-1.0/diana/components/FeatureViewer.java
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act-1.0/diana/components/FileDialogEntrySource.java
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act-1.0/diana/components/FileViewer.java
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act-1.0/diana/components/GotoMenu.java
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act-1.0/diana/components/KeyChoice.java
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act-1.0/diana/components/KeyChooser.java
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act-1.0/diana/components/ListDialog.java
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act-1.0/diana/components/LogViewer.java
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act-1.0/diana/components/MarkerRangeRequester.java
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act-1.0/diana/components/MarkerRangeRequesterEvent.java
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act-1.0/diana/components/MarkerRangeRequesterListener.java
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act-1.0/diana/components/MessageDialog.java
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act-1.0/diana/components/MessageFrame.java
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act-1.0/diana/components/Navigator.java
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act-1.0/diana/components/Plot.java
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act-1.0/diana/components/PlotMouseListener.java
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act-1.0/diana/components/ProcessWatcher.java
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act-1.0/diana/components/ProcessWatcherEvent.java
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act-1.0/diana/components/ProcessWatcherListener.java
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act-1.0/diana/components/QualifierChoice.java
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act-1.0/diana/components/RawFeatureEdit.java
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act-1.0/diana/components/RunMenu.java
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act-1.0/diana/components/ScoreChangeEvent.java
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act-1.0/diana/components/ScoreChangeListener.java
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act-1.0/diana/components/ScoreChanger.java
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act-1.0/diana/components/ScoreScrollbar.java
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act-1.0/diana/components/SearchResultViewer.java
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act-1.0/diana/components/SelectMenu.java
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act-1.0/diana/components/SelectionInfoDisplay.java
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act-1.0/diana/components/SelectionMenu.java
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act-1.0/diana/components/SelectionViewer.java
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act-1.0/diana/components/Selector.java
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act-1.0/diana/components/SequenceViewer.java
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act-1.0/diana/components/Splash.java
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act-1.0/diana/components/TextDialog.java
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act-1.0/diana/components/TextRequester.java
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act-1.0/diana/components/TextRequesterEvent.java
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act-1.0/diana/components/TextRequesterListener.java
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act-1.0/diana/components/ViewMenu.java
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act-1.0/diana/components/WritableEMBLCorbaEntrySource.java
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act-1.0/diana/components/WriteMenu.java
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act-1.0/diana/components/Plot.class
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act-1.0/diana/components/YesNoDialog.java
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act-1.0/diana/components/ActMain.class
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act-1.0/diana/components/ActMain$1.class
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act-1.0/diana/components/ActMain$2.class
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act-1.0/diana/components/Splash.class
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act-1.0/diana/components/Splash$1.class
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act-1.0/diana/components/Splash$2.class
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act-1.0/diana/components/Splash$3.class
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act-1.0/diana/components/MessageFrame.class
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act-1.0/diana/components/MessageFrame$1.class
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act-1.0/diana/components/MessageFrame$2.class
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act-1.0/diana/components/MessageFrame$3.class
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act-1.0/diana/components/LogViewer.class
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act-1.0/diana/components/LogViewer$1.class
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act-1.0/diana/components/EntryFileDialog.class
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act-1.0/diana/components/Comparator.class
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act-1.0/diana/components/Comparator$1.class
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act-1.0/diana/components/Comparator$2.class
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act-1.0/diana/components/Comparator$3.class
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act-1.0/diana/components/Comparator$4.class
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act-1.0/diana/components/Comparator$5.class
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act-1.0/diana/components/Comparator$6.class
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act-1.0/diana/components/Comparator$7.class
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act-1.0/diana/components/Comparator$8.class
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act-1.0/diana/components/Comparator$9.class
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act-1.0/diana/components/Comparator$10.class
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act-1.0/diana/components/Comparator$11.class
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act-1.0/diana/components/Comparator$12.class
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act-1.0/diana/components/Comparator$13.class
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act-1.0/diana/components/Comparator$14.class
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act-1.0/diana/components/Comparator$15.class
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act-1.0/diana/components/FeatureDisplayOwner.class
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act-1.0/diana/components/ComparatorDialog.class
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act-1.0/diana/components/ComparatorDialog$1.class
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act-1.0/diana/components/ComparatorDialog$2.class
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act-1.0/diana/components/ComparatorDialog$3.class
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act-1.0/diana/components/ComparatorDialog$4.class
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act-1.0/diana/components/ComparatorDialog$5.class
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act-1.0/diana/components/ComparatorDialog$6.class
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act-1.0/diana/components/FileViewer.class
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act-1.0/diana/components/FileDialogEntrySource.class
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act-1.0/diana/components/FileViewer$1.class
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act-1.0/diana/components/FileViewer$2.class
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act-1.0/diana/components/FileViewer$3.class
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act-1.0/diana/components/MessageDialog.class
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act-1.0/diana/components/MessageDialog$1.class
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act-1.0/diana/components/MessageDialog$2.class
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act-1.0/diana/components/MessageDialog$3.class
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act-1.0/diana/components/YesNoDialog.class
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act-1.0/diana/components/YesNoDialog$1.class
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act-1.0/diana/components/YesNoDialog$2.class
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act-1.0/diana/components/YesNoDialog$3.class
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act-1.0/diana/components/BasePlotGroup.class
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act-1.0/diana/components/BasePlot.class
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act-1.0/diana/components/DisplayAdjustmentListener.class
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act-1.0/diana/components/FeatureDisplay.class
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act-1.0/diana/components/FeatureDisplay$1.class
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act-1.0/diana/components/FeatureDisplay$2.class
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act-1.0/diana/components/FeatureDisplay$3.class
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act-1.0/diana/components/FeatureDisplay$4.class
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act-1.0/diana/components/FeatureDisplay$5.class
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act-1.0/diana/components/FeatureDisplay$6.class
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act-1.0/diana/components/EntryGroupPanel.class
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act-1.0/diana/components/DisplayComponent.class
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act-1.0/diana/components/EntryGroupPanel$1.class
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act-1.0/diana/components/CanvasPanel.class
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act-1.0/diana/components/CanvasPanel$1.class
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act-1.0/diana/components/AlignmentViewer.class
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act-1.0/diana/components/AlignmentViewer$1.class
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act-1.0/diana/components/AlignmentViewer$2.class
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act-1.0/diana/components/AlignmentViewer$3.class
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act-1.0/diana/components/AlignmentViewer$4.class
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act-1.0/diana/components/AlignmentViewer$5.class
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act-1.0/diana/components/DisplayAdjustmentEvent.class
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act-1.0/diana/components/BasePlot$1.class
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act-1.0/diana/components/Plot$1.class
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act-1.0/diana/components/Plot$2.class
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act-1.0/diana/components/Plot$3.class
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act-1.0/diana/components/Plot$4.class
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act-1.0/diana/components/Plot$5.class
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act-1.0/diana/components/Plot$6.class
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act-1.0/diana/components/Plot$7.class
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act-1.0/diana/components/FeaturePopup.class
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act-1.0/diana/components/FeaturePopup$1.class
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act-1.0/diana/components/FeaturePopup$2.class
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act-1.0/diana/components/FeaturePopup$3.class
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act-1.0/diana/components/FeaturePopup$4.class
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act-1.0/diana/components/FeaturePopup$5.class
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act-1.0/diana/components/FeaturePopup$6.class
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act-1.0/diana/components/FeaturePopup$7.class
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act-1.0/diana/components/EditMenu.class
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act-1.0/diana/components/FeaturePopup$8.class
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act-1.0/diana/components/FeaturePopup$9.class
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act-1.0/diana/components/FeaturePopup$10.class
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act-1.0/diana/components/FeaturePopup$11.class
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act-1.0/diana/components/FeaturePopup$12.class
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act-1.0/diana/components/FeaturePopup$13.class
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act-1.0/diana/components/FeaturePopup$14.class
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act-1.0/diana/components/FeaturePopup$15.class
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act-1.0/diana/components/FeaturePopup$16.class
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act-1.0/diana/components/FeaturePopup$17.class
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act-1.0/diana/components/FeaturePopup$18.class
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act-1.0/diana/components/FeaturePopup$19.class
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act-1.0/diana/components/FeaturePopup$20.class
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act-1.0/diana/components/FeaturePopup$21.class
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act-1.0/diana/components/FeatureEdit.class
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act-1.0/diana/components/FeatureEdit$1.class
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act-1.0/diana/components/FeatureEdit$2.class
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act-1.0/diana/components/FeatureEdit$3.class
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act-1.0/diana/components/FeatureEdit$4.class
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act-1.0/diana/components/FeatureEdit$5.class
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act-1.0/diana/components/FeatureEdit$6.class
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act-1.0/diana/components/FeatureEdit$7.class
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act-1.0/diana/components/FeatureEdit$8.class
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act-1.0/diana/components/FeatureEdit$9.class
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act-1.0/diana/components/FeatureEdit$10.class
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act-1.0/diana/components/EditMenu$1.class
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act-1.0/diana/components/EditMenu$2.class
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act-1.0/diana/components/EditMenu$3.class
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act-1.0/diana/components/EditMenu$4.class
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act-1.0/diana/components/EditMenu$5.class
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act-1.0/diana/components/EditMenu$6.class
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act-1.0/diana/components/EditMenu$7.class
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act-1.0/diana/components/EditMenu$8.class
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act-1.0/diana/components/EditMenu$9.class
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act-1.0/diana/components/EditMenu$10.class
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act-1.0/diana/components/EditMenu$11.class
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act-1.0/diana/components/EditMenu$12.class
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act-1.0/diana/components/EditMenu$13.class
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act-1.0/diana/components/EditMenu$14.class
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act-1.0/diana/components/EditMenu$15.class
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act-1.0/diana/components/EditMenu$16.class
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act-1.0/diana/components/EditMenu$17.class
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act-1.0/diana/components/EditMenu$18.class
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act-1.0/diana/components/EditMenu$19.class
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act-1.0/diana/components/EditMenu$20.class
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act-1.0/diana/components/EditMenu$21.class
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act-1.0/diana/components/EditMenu$22.class
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act-1.0/diana/components/SelectionMenu.class
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act-1.0/diana/components/EntryEdit.class
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act-1.0/diana/components/EntryEdit$1.class
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act-1.0/diana/components/EntryEdit$2.class
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act-1.0/diana/components/EntryEdit$3.class
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act-1.0/diana/components/EntryEdit$4.class
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act-1.0/diana/components/EntryEdit$5.class
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act-1.0/diana/components/EntryEdit$6.class
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act-1.0/diana/components/EntryEdit$7.class
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act-1.0/diana/components/EntryEdit$8.class
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act-1.0/diana/components/EntryEdit$9.class
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act-1.0/diana/components/EntryEdit$10.class
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act-1.0/diana/components/EntryEdit$11.class
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act-1.0/diana/components/EntryEdit$12.class
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act-1.0/diana/components/EntryEdit$13.class
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act-1.0/diana/components/EntryEdit$14.class
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act-1.0/diana/components/EntryEdit$15.class
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act-1.0/diana/components/ReadFeaturesActionListener.class
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act-1.0/diana/components/SaveEntryActionListener.class
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act-1.0/diana/components/SaveEntryAsActionListener.class
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act-1.0/diana/components/EntryHeaderEdit.class
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act-1.0/diana/components/SaveEntryAsEMBLActionListener.class
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act-1.0/diana/components/SaveEntryAsGenbankActionListener.class
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act-1.0/diana/components/SaveEntryAsGFFActionListener.class
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act-1.0/diana/components/SaveEntryAsSubmissionActionListener.class
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act-1.0/diana/components/EntryHeaderEdit$1.class
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act-1.0/diana/components/FeatureListFrame.class
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act-1.0/diana/components/FeatureListFrame$1.class
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act-1.0/diana/components/FeatureListFrame$2.class
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act-1.0/diana/components/FeatureListFrame$3.class
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act-1.0/diana/components/TextRequester.class
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act-1.0/diana/components/TextRequester$1.class
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act-1.0/diana/components/TextRequester$2.class
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act-1.0/diana/components/TextRequester$3.class
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act-1.0/diana/components/ViewMenu.class
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act-1.0/diana/components/TextRequesterListener.class
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act-1.0/diana/components/TextRequesterEvent.class
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act-1.0/diana/components/ViewMenu$1.class
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act-1.0/diana/components/ViewMenu$2.class
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act-1.0/diana/components/ViewMenu$3.class
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act-1.0/diana/components/ViewMenu$4.class
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act-1.0/diana/components/ViewMenu$5.class
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act-1.0/diana/components/ViewMenu$6.class
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act-1.0/diana/components/ViewMenu$7.class
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act-1.0/diana/components/ViewMenu$8.class
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act-1.0/diana/components/ViewMenu$9.class
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act-1.0/diana/components/ViewMenu$10.class
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act-1.0/diana/components/ViewMenu$11.class
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act-1.0/diana/components/ViewMenu$12.class
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act-1.0/diana/components/ViewMenu$13.class
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act-1.0/diana/components/ViewMenu$14.class
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act-1.0/diana/components/ViewMenu$15.class
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act-1.0/diana/components/ViewMenu$16.class
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act-1.0/diana/components/ViewMenu$17.class
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act-1.0/diana/components/ViewMenu$18.class
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act-1.0/diana/components/ViewMenu$19.class
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act-1.0/diana/components/ViewMenu$20.class
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act-1.0/diana/components/ViewMenu$21.class
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act-1.0/diana/components/ViewMenu$22.class
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act-1.0/diana/components/ViewMenu$23.class
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act-1.0/diana/components/ViewMenu$24.class
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act-1.0/diana/components/ViewMenu$25.class
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act-1.0/diana/components/ViewMenu$26.class
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act-1.0/diana/components/ViewMenu$27.class
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act-1.0/diana/components/ViewMenu$28.class
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act-1.0/diana/components/ViewMenu$29.class
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act-1.0/diana/components/SelectionViewer.class
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act-1.0/diana/components/SelectionViewer$1.class
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act-1.0/diana/components/EntryGroupInfoDisplay.class
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act-1.0/diana/components/EntryGroupInfoDisplay$1.class
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act-1.0/diana/components/EntryGroupInfoDisplay$2.class
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act-1.0/diana/components/FeatureList.class
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act-1.0/diana/components/EntryGroupInfoDisplay$3.class
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act-1.0/diana/components/FeatureList$1.class
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act-1.0/diana/components/FeatureList$2.class
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act-1.0/diana/components/FeatureList$3.class
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act-1.0/diana/components/KeyChooser.class
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act-1.0/diana/components/KeyChooser$1.class
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act-1.0/diana/components/KeyChooser$2.class
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act-1.0/diana/components/KeyChooser$3.class
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act-1.0/diana/components/KeyChooser$4.class
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act-1.0/diana/components/KeyChoice.class
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act-1.0/diana/components/KeyChoice$1.class
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act-1.0/diana/components/FeatureViewer.class
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act-1.0/diana/components/FeatureViewer$1.class
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act-1.0/diana/components/GotoMenu.class
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act-1.0/diana/components/FeaturePlotGroup.class
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act-1.0/diana/components/FeaturePlotGroup$1.class
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act-1.0/diana/components/FeaturePlotGroup$2.class
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act-1.0/diana/components/FeaturePlotGroup$3.class
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act-1.0/diana/components/FeaturePlotGroup$4.class
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act-1.0/diana/components/FeaturePlotGroup$5.class
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act-1.0/diana/components/SearchResultViewer.class
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act-1.0/diana/components/SearchResultViewer$1.class
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act-1.0/diana/components/FeatureInfo.class
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act-1.0/diana/components/FeatureInfo$1.class
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act-1.0/diana/components/FeatureInfo$2.class
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act-1.0/diana/components/FeatureBaseViewer.class
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act-1.0/diana/components/FeatureBaseViewer$1.class
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act-1.0/diana/components/FeatureAminoAcidViewer.class
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act-1.0/diana/components/ScoreChangeListener.class
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act-1.0/diana/components/FeatureAminoAcidViewer$1.class
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act-1.0/diana/components/ScoreChangeEvent.class
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act-1.0/diana/components/ScoreChanger.class
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act-1.0/diana/components/ScoreChanger$1.class
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act-1.0/diana/components/ScoreChanger$2.class
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act-1.0/diana/components/ScoreChanger$3.class
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act-1.0/diana/components/ScoreChanger$4.class
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act-1.0/diana/components/ScoreChanger$5.class
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act-1.0/diana/components/PlotMouseListener.class
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act-1.0/diana/components/EntryGroupMenu.class
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act-1.0/diana/components/EntryGroupMenu$1.class
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act-1.0/diana/components/EntryGroupMenu$2.class
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act-1.0/diana/components/EntryGroupMenu$3.class
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act-1.0/diana/components/EntryGroupMenu$4.class
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act-1.0/diana/components/EntryGroupMenu$5.class
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act-1.0/diana/components/SelectMenu.class
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act-1.0/diana/components/EntryGroupMenu$6.class
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act-1.0/diana/components/SelectMenu$1.class
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act-1.0/diana/components/SelectMenu$2.class
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act-1.0/diana/components/SelectMenu$3.class
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act-1.0/diana/components/SelectMenu$4.class
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act-1.0/diana/components/SelectMenu$5.class
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act-1.0/diana/components/SelectMenu$6.class
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act-1.0/diana/components/SelectMenu$7.class
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act-1.0/diana/components/SelectMenu$8.class
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act-1.0/diana/components/SelectMenu$9.class
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act-1.0/diana/components/SelectMenu$10.class
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act-1.0/diana/components/SelectMenu$11.class
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act-1.0/diana/components/SelectMenu$12.class
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act-1.0/diana/components/SelectMenu$13.class
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act-1.0/diana/components/SelectMenu$14.class
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act-1.0/diana/components/SelectMenu$15.class
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act-1.0/diana/components/SelectMenu$16.class
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act-1.0/diana/components/GotoMenu$1.class
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act-1.0/diana/components/GotoMenu$2.class
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act-1.0/diana/components/GotoMenu$3.class
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act-1.0/diana/components/GotoMenu$4.class
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act-1.0/diana/components/GotoMenu$5.class
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act-1.0/diana/components/GotoMenu$6.class
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act-1.0/diana/components/GotoMenu$7.class
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act-1.0/diana/components/GotoMenu$8.class
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act-1.0/diana/components/GotoMenu$9.class
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act-1.0/diana/components/GotoMenu$10.class
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act-1.0/diana/components/AddMenu.class
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act-1.0/diana/components/AddMenu$1.class
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act-1.0/diana/components/AddMenu$2.class
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act-1.0/diana/components/AddMenu$3.class
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act-1.0/diana/components/AddMenu$4.class
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act-1.0/diana/components/AddMenu$5.class
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act-1.0/diana/components/AddMenu$6.class
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act-1.0/diana/components/AddMenu$7.class
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act-1.0/diana/components/AddMenu$8.class
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act-1.0/diana/components/AddMenu$9.class
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act-1.0/diana/components/AddMenu$10.class
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act-1.0/diana/components/AddMenu$11.class
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act-1.0/diana/components/AddMenu$12.class
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act-1.0/diana/components/AddMenu$13.class
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act-1.0/diana/components/AddMenu$14.class
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act-1.0/diana/components/AddMenu$15.class
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act-1.0/diana/components/WriteMenu.class
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act-1.0/diana/components/WriteMenu$1.class
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act-1.0/diana/components/WriteMenu$2.class
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act-1.0/diana/components/WriteMenu$3.class
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act-1.0/diana/components/WriteMenu$4.class
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act-1.0/diana/components/WriteMenu$5.class
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act-1.0/diana/components/WriteMenu$6.class
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act-1.0/diana/components/WriteMenu$7.class
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act-1.0/diana/components/WriteMenu$8.class
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act-1.0/diana/components/WriteMenu$9.class
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act-1.0/diana/components/WriteMenu$10.class
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act-1.0/diana/components/WriteMenu$11.class
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act-1.0/diana/components/WriteMenu$12.class
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act-1.0/diana/components/WriteMenu$13.class
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act-1.0/diana/components/WriteMenu$14.class
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act-1.0/diana/components/WriteMenu$15.class
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act-1.0/diana/components/WriteMenu$16.class
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act-1.0/diana/components/WriteMenu$17.class
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act-1.0/diana/components/WriteMenu$18.class
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act-1.0/diana/components/WriteMenu$19.class
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act-1.0/diana/components/WriteMenu$20.class
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act-1.0/diana/components/WriteMenu$21.class
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act-1.0/diana/components/RunMenu.class
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act-1.0/diana/components/RunMenu$1.class
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act-1.0/diana/components/RunMenu$2.class
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act-1.0/diana/components/QualifierChoice.class
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act-1.0/diana/components/ProcessWatcher.class
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act-1.0/diana/components/ProcessWatcherListener.class
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act-1.0/diana/components/ProcessWatcherEvent.class
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act-1.0/diana/components/EntryGroupDisplay.class
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act-1.0/diana/components/EntryGroupDisplay$1.class
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act-1.0/diana/components/EntryGroupDisplay$2.class
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act-1.0/diana/components/SelectionInfoDisplay.class
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act-1.0/diana/components/EntryActionListener.class
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act-1.0/diana/components/FeaturePlot.class
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act-1.0/diana/components/SequenceViewer.class
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act-1.0/diana/components/ScoreScrollbar.class
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act-1.0/diana/components/Selector.class
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act-1.0/diana/components/Selector$1.class
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act-1.0/diana/components/Selector$2.class
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act-1.0/diana/components/Selector$3.class
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act-1.0/diana/components/Selector$4.class
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act-1.0/diana/components/Selector$5.class
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act-1.0/diana/components/Selector$6.class
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act-1.0/diana/components/Selector$7.class
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act-1.0/diana/components/Navigator.class
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act-1.0/diana/components/Selector$8.class
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act-1.0/diana/components/Selector$9.class
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act-1.0/diana/components/Selector$10.class
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act-1.0/diana/components/Selector$11.class
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act-1.0/diana/components/Selector$12.class
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act-1.0/diana/components/MarkerRangeRequester.class
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act-1.0/diana/components/MarkerRangeRequesterListener.class
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act-1.0/diana/components/MarkerRangeRequesterEvent.class
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act-1.0/diana/components/Navigator$1.class
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act-1.0/diana/components/Navigator$2.class
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act-1.0/diana/components/Navigator$3.class
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act-1.0/diana/components/Navigator$4.class
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act-1.0/diana/components/Navigator$5.class
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act-1.0/diana/components/Navigator$6.class
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act-1.0/diana/components/Navigator$7.class
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act-1.0/diana/components/Navigator$8.class
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act-1.0/diana/components/Navigator$9.class
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act-1.0/diana/components/ExternalProgramOptions.class
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act-1.0/diana/components/ExternalProgramOptions$1.class
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act-1.0/diana/sequence/CVS/Root
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act-1.0/diana/sequence/CVS/Repository
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act-1.0/diana/sequence/CVS/Entries
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act-1.0/diana/sequence/AminoAcidSequence.java
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act-1.0/diana/sequence/BasePattern.java
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act-1.0/diana/sequence/BasePatternFormatException.java
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act-1.0/diana/sequence/Bases.java
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act-1.0/diana/sequence/Marker.java
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act-1.0/diana/sequence/MarkerChangeEvent.java
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act-1.0/diana/sequence/MarkerChangeListener.java
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act-1.0/diana/sequence/MarkerRange.java
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act-1.0/diana/sequence/MarkerRangeVector.java
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act-1.0/diana/sequence/NoSequenceException.java
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act-1.0/diana/sequence/SequenceChangeEvent.java
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act-1.0/diana/sequence/SequenceChangeListener.java
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act-1.0/diana/sequence/Strand.java
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act-1.0/diana/sequence/Bases.class
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act-1.0/diana/sequence/SequenceChangeListener.class
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act-1.0/diana/sequence/NoSequenceException.class
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act-1.0/diana/sequence/Strand.class
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act-1.0/diana/sequence/SequenceChangeEvent.class
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act-1.0/diana/sequence/AminoAcidSequence.class
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act-1.0/diana/sequence/MarkerChangeListener.class
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act-1.0/diana/sequence/Marker.class
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act-1.0/diana/sequence/MarkerInternal.class
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act-1.0/diana/sequence/MarkerRange.class
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act-1.0/diana/sequence/MarkerChangeEvent.class
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act-1.0/diana/sequence/BasePattern.class
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act-1.0/diana/sequence/BasePatternFormatException.class
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act-1.0/diana/sequence/MarkerRangeVector.class
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act-1.0/diana/Logger.class
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act-1.0/diana/Options.class
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act-1.0/diana/EntryGroup.class
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act-1.0/diana/FeatureChangeListener.class
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act-1.0/diana/EntryChangeListener.class
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act-1.0/diana/ChangeListener.class
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act-1.0/diana/SimpleEntryGroup.class
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act-1.0/diana/SimpleEntryGroup$FeatureEnumerator.class
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act-1.0/diana/EntryVector.class
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act-1.0/diana/FeatureEnumeration.class
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act-1.0/diana/Entry.class
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act-1.0/diana/Entry$FeatureEnumerator.class
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act-1.0/diana/Selectable.class
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act-1.0/diana/ComparisonData.class
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act-1.0/diana/ComparisonDataFactory.class
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act-1.0/diana/EntrySourceVector.class
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act-1.0/diana/EntrySource.class
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act-1.0/diana/ExternalProgramVector.class
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act-1.0/diana/ExternalSearchProgram.class
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act-1.0/diana/ExternalProgram.class
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act-1.0/diana/Feature.class
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act-1.0/diana/ExternalProgramException.class
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act-1.0/diana/ExternalApplication.class
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act-1.0/diana/ChangeEvent.class
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act-1.0/diana/LastSegmentException.class
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act-1.0/diana/FeatureVector.class
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act-1.0/diana/EntryGroupChangeListener.class
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act-1.0/diana/FeatureChangeEvent.class
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act-1.0/diana/EntryChangeEvent.class
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act-1.0/diana/EntryGroupChangeEvent.class
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act-1.0/diana/FeatureKeyQualifierPredicate.class
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act-1.0/diana/FeaturePredicate.class
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act-1.0/diana/AlignMatch.class
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act-1.0/diana/MSPcrunchComparisonData.class
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act-1.0/diana/SimpleComparisonData.class
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act-1.0/diana/SelectionChangeListener.class
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act-1.0/diana/GotoListener.class
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act-1.0/diana/Selection.class
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act-1.0/diana/GotoEventSource.class
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act-1.0/diana/SimpleGotoEventSource.class
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act-1.0/diana/GotoEvent.class
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act-1.0/diana/SelectionChangeEvent.class
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act-1.0/diana/FeatureSegmentVector.class
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act-1.0/diana/FeatureSegment.class
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act-1.0/diana/ComparisonDataParseException.class
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act-1.0/diana/FeatureFromVectorPredicate.class
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act-1.0/diana/FilteredEntryGroup.class
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act-1.0/diana/FilteredEntryGroup$1.class
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act-1.0/diana/FilteredEntryGroup$2.class
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act-1.0/diana/FilteredEntryGroup$3.class
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act-1.0/diana/FilteredEntryGroup$FeatureEnumerator.class
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act-1.0/diana/FeatureKeyPredicate.class
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act-1.0/diana/AlignMatchVector.class
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act-1.0/etc/CVS/Root
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act-1.0/etc/CVS/Repository
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act-1.0/etc/CVS/Entries
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act-1.0/etc/c1215.embl
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act-1.0/etc/changes.shtml
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act-1.0/etc/feature_keys
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act-1.0/etc/options
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act-1.0/etc/pombe.usage
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act-1.0/etc/qualifier_types
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act-1.0/collections/CVS/Root
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act-1.0/collections/CVS/Repository
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act-1.0/collections/CVS/Entries
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act-1.0/collections/ArrayEnumeration.java
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act-1.0/collections/Assertable.java
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act-1.0/collections/Bag.java
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act-1.0/collections/BinaryFunction.java
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act-1.0/collections/CEImpl.java
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act-1.0/collections/CLCell.java
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act-1.0/collections/CLEnumeration.java
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act-1.0/collections/Cell.java
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act-1.0/collections/CheckedBag.java
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act-1.0/collections/CheckedCollection.java
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act-1.0/collections/CheckedMap.java
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act-1.0/collections/CheckedSeq.java
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act-1.0/collections/CheckedSet.java
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act-1.0/collections/Keyed.java
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act-1.0/collections/CircularList.java
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act-1.0/collections/Collection.java
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act-1.0/collections/CollectionEnumeration.java
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act-1.0/collections/Comparator.java
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act-1.0/collections/Dynarray.java
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act-1.0/collections/CorruptedEnumerationException.java
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act-1.0/collections/DAEnumeration.java
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act-1.0/collections/DefaultComparator.java
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act-1.0/collections/DefaultImplementations.java
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act-1.0/collections/ElementSortedCollection.java
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act-1.0/collections/FilteringEnumeration.java
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act-1.0/collections/Function.java
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act-1.0/collections/HTEnumeration.java
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act-1.0/collections/HTPairEnumeration.java
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act-1.0/collections/HashTableParams.java
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act-1.0/collections/HashedMap.java
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act-1.0/collections/HashedSet.java
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act-1.0/collections/IllegalElementException.java
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act-1.0/collections/Immutable.java
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act-1.0/collections/ImplementationCheckable.java
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act-1.0/collections/IncrBag.java
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act-1.0/collections/ImplementationError.java
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act-1.0/collections/IncrCollectionEnumeration.java
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act-1.0/collections/IncrImpl.java
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act-1.0/collections/IncrMap.java
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act-1.0/collections/IncrSeq.java
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act-1.0/collections/IncrSet.java
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act-1.0/collections/InterleavingEnumeration.java
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act-1.0/collections/KeySortedCollection.java
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act-1.0/collections/LBEnumeration.java
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act-1.0/collections/LLCell.java
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act-1.0/collections/LLCellEnumeration.java
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act-1.0/collections/LLMap.java
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act-1.0/collections/LLPair.java
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act-1.0/collections/LLPairEnumeration.java
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act-1.0/collections/LinkedBuffer.java
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act-1.0/collections/LinkedList.java
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act-1.0/collections/Map.java
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act-1.0/collections/MappingEnumeration.java
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act-1.0/collections/Pair.java
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act-1.0/collections/Predicate.java
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act-1.0/collections/Procedure.java
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act-1.0/collections/RBCell.java
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act-1.0/collections/RBCellEnumeration.java
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act-1.0/collections/RBMap.java
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act-1.0/collections/RBPair.java
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act-1.0/collections/RBPairEnumeration.java
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act-1.0/collections/RBTree.java
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act-1.0/collections/Seq.java
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act-1.0/collections/Set.java
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act-1.0/collections/SimpleTest.java
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act-1.0/collections/SortableCollection.java
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act-1.0/collections/UpdatableBag.java
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act-1.0/collections/UpdatableBagImpl.java
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act-1.0/collections/UpdatableCollection.java
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act-1.0/collections/UpdatableImpl.java
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act-1.0/collections/UpdatableMap.java
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act-1.0/collections/UpdatableMapImpl.java
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act-1.0/collections/javaMake
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act-1.0/collections/UpdatableSeq.java
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act-1.0/collections/UpdatableSeqImpl.java
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act-1.0/collections/UpdatableSet.java
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act-1.0/collections/UpdatableSetImpl.java
|
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act-1.0/collections/collections_Dynarray.h
|
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act-1.0/collections/Dynarray.class
|
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act-1.0/collections/UpdatableSeqImpl.class
|
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act-1.0/collections/UpdatableSeq.class
|
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act-1.0/collections/SortableCollection.class
|
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act-1.0/collections/Seq.class
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act-1.0/collections/UpdatableImpl.class
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act-1.0/collections/UpdatableCollection.class
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act-1.0/collections/IllegalElementException.class
|
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act-1.0/collections/CorruptedEnumerationException.class
|
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act-1.0/collections/ImplementationError.class
|
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act-1.0/collections/Collection.class
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act-1.0/collections/ImplementationCheckable.class
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act-1.0/collections/Assertable.class
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act-1.0/collections/Comparator.class
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act-1.0/collections/Predicate.class
|
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act-1.0/collections/CollectionEnumeration.class
|
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act-1.0/collections/DAEnumeration.class
|
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act-1.0/collections/CEImpl.class
|
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act-1.0/collections/KeySortedCollection.class
|
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act-1.0/collections/Map.class
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act-1.0/collections/ElementSortedCollection.class
|
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act-1.0/collections/Bag.class
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act-1.0/collections/Set.class
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act-1.0/collections/RBTree.class
|
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act-1.0/collections/UpdatableBagImpl.class
|
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act-1.0/collections/UpdatableBag.class
|
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act-1.0/collections/RBCell.class
|
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act-1.0/collections/Cell.class
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act-1.0/collections/DefaultComparator.class
|
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act-1.0/collections/RBCellEnumeration.class
|
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act-1.0/collections/Keyed.class
|
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act-1.0/Dad.class
|
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act-1.0/AppGlobal.class
|
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bin/act
|
|
@dirrm act-1.0/CVS
|
|
@dirrm act-1.0/META-INF/CVS
|
|
@dirrm act-1.0/META-INF
|
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@dirrm act-1.0/uk/CVS
|
|
@dirrm act-1.0/uk/ac/CVS
|
|
@dirrm act-1.0/uk/ac/sanger/CVS
|
|
@dirrm act-1.0/uk/ac/sanger/pathogens/CVS
|
|
@dirrm act-1.0/uk/ac/sanger/pathogens/embl/CVS
|
|
@dirrm act-1.0/uk/ac/sanger/pathogens/embl
|
|
@dirrm act-1.0/uk/ac/sanger/pathogens
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@dirrm act-1.0/uk/ac/sanger
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@dirrm act-1.0/uk/ac
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@dirrm act-1.0/uk
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@dirrm act-1.0/diana/CVS
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@dirrm act-1.0/diana/plot/CVS
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@dirrm act-1.0/diana/plot
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@dirrm act-1.0/diana/components/CVS
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@dirrm act-1.0/diana/components
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@dirrm act-1.0/diana/sequence/CVS
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@dirrm act-1.0/diana/sequence
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@dirrm act-1.0/diana
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@dirrm act-1.0/etc/CVS
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@dirrm act-1.0/etc
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@dirrm act-1.0/collections/CVS
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@dirrm act-1.0/collections
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@dirrm act-1.0
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