freebsd-ports/science
Gerald Pfeifer 15945f8122 Update the default version of GCC in the Ports Collection from GCC 4.7.4
to GCC 4.8.3.

Part II, Bump PORTREVISIONs.

PR:		192025
Tested by:	antoine (-exp runs)
Approved by:	portmgr (implicit)
2014-09-10 20:50:31 +00:00
..
2d-rewriter
afni Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
avogadro Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
bddsolve
bft Add USES=libtool and INSTALL_TARGET=install-strip 2014-07-08 15:24:14 +00:00
bodr Convert a bunch of USE_BZIP2 to USES=tar:bzip2 2014-07-29 18:41:15 +00:00
brian Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
buddy Add DOCS option where PORTDOCS is in plist. 2014-07-16 03:18:26 +00:00
cdcl
cdf Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
cdo - Update to 1.6.4 2014-07-04 02:49:34 +00:00
cgnslib Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
cgribex
checkmol
chemical-mime-data Remove indefinite articles and trailing periods from COMMENT, plus 2014-07-17 08:57:51 +00:00
chemtool - Fix missing library problems when the linker enforces explicit linking 2014-08-26 14:06:08 +00:00
chemtool-devel - Fix missing library problems when the linker enforces explicit linking 2014-08-26 14:06:08 +00:00
clhep science/clhep: Upgrade version 2.2.0.1 => 2.2.0.3 2014-08-24 09:07:33 +00:00
colt Remove NOPORTDOCS and NOPORTEXAMPLES. 2014-07-04 22:08:14 +00:00
crf++ - Convert to USES=libtool 2014-07-08 15:18:44 +00:00
dcl Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
devisor
dlpoly-classic Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
ecs Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
elmer-eio Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
elmer-matc Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
elmer-meshgen2d Remove indefinite articles and trailing periods from COMMENT, plus 2014-07-17 08:57:51 +00:00
elmergrid Remove indefinite articles and trailing periods from COMMENT, plus 2014-07-17 08:57:51 +00:00
epte
fastcap Repair instances, almost all courtesy of bf ;-), of spaces 2014-07-29 20:55:27 +00:00
fasthenry Support stage 2014-08-29 18:33:30 +00:00
fisicalab math/gsl: 2014-08-17 13:09:56 +00:00
fvcom Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
fvcom-mpi Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
fvm Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
gchemutils Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
getdp Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
ghemical Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
ghmm - Convert to USES=libtool 2014-07-08 14:50:22 +00:00
gnudatalanguage Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
gramps Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
grib_api - Add grib_api 1.12.3 2014-08-29 17:31:42 +00:00
gromacs Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
gsmc - Fix missing library problems when the linker enforces explicit linking 2014-08-26 14:06:08 +00:00
gtamsanalyzer Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
gwyddion Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
h5utils Remove indefinite articles and trailing periods from COMMENT, plus 2014-07-17 08:57:51 +00:00
harminv Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
hdf Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
hdf5
hdf-java Convert GMAKE to MAKE_CMD 2014-06-25 05:35:31 +00:00
hs-bio Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
InsightToolkit
isaac-cfd Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
jmol
jstrack Mark BROKEN: Checksum and size mismatch 2014-08-01 17:26:45 +00:00
kalzium Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
kst2 Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
lamprop Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
libctl Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
libghemical Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
libint - Stagify 2014-08-06 16:06:55 +00:00
libkml
liblinear Remove indefinite articles and trailing periods from COMMENT, plus 2014-07-17 08:57:51 +00:00
liboglappth Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
libquantum Convert to USES=libtool 2014-07-08 13:34:32 +00:00
libsvm Remove indefinite articles and trailing periods from COMMENT, plus 2014-07-17 08:57:51 +00:00
libsvm-python
linsmith - maintain by hamradio as we have gsmc another smith charting program 2014-06-29 11:55:30 +00:00
massxpert - Support staging. 2014-06-30 20:38:59 +00:00
mbdyn Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
medit Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
meep Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
mei - Add USES=libtool 2014-07-07 21:57:42 +00:00
metaf2xml Add DOCS option where PORTDOCS is in plist. 2014-07-16 03:18:26 +00:00
minc2 science/minc2: Unbreak, Upgrade version 2.0.18 => 2.2.00 and stage 2014-07-29 21:33:51 +00:00
mol2ps
mpb Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
mpqc Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
mpqc-mpich Stage science/mpqc and science/mpqc-mpich 2014-09-08 00:20:03 +00:00
ncs Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
netcdf
netcdf-cxx - Use USE_GITHUB 2014-08-15 17:27:48 +00:00
netcdf-fortran Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
nifticlib
openbabel
openkim Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
p5-Algorithm-SVMLight Modernize LIB_DEPENDS 2014-07-14 18:42:04 +00:00
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR - Update to 1.27 2014-06-25 12:14:23 +00:00
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS
p5-PerlMol
p5-Physics-Unit
paje Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
paraview Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
pnetcdf Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
psychopy Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
pulseview science/pulseview: Remove unnecessary RUN_DEPENDS 2014-08-03 16:16:21 +00:00
py-coards
py-DendroPy
py-h5py Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
py-hcluster Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
py-mdp Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
py-mlpy Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
py-netCDF4 Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
py-obspy Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
py-paida science/py-paida: support stage 2014-08-05 13:22:35 +00:00
py-pupynere Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
py-pyaixi
py-pydap Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
py-pydicom
py-pysal Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
py-scikit-learn Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
py-scimath Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
py-scipy Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
py-ws2300
pybrain Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
pycdf Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
pynn Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
pyteomics Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
pyteomics.biolccc
qcl - Fix build with clang by using std::vector instead of variable size array of non-POD type 2014-09-04 18:43:58 +00:00
qtresistors
R-cran-AMORE Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-bayesm Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-DCluster Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-e1071 Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-eco Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-Epi Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-epicalc Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-snow Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
R-cran-som Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
ruby-dcl Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
ruby-gphys Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
ruby-netcdf Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
rubygem-ai4r science/rubygem-ai4r: update to 1.13 2014-08-23 21:52:50 +00:00
rubygem-netcdf
sigrok-cli science/sigrok-cli: update to 0.5.0 2014-07-28 23:06:29 +00:00
sigrok-firmware Add new port: science/sigrok-firmware 2014-08-03 22:37:51 +00:00
sigrok-firmware-fx2lafw Add new port: science/sigrok-firmware-fx2lafw 2014-08-03 22:24:50 +00:00
sigrok-firmware-utils Add new port: science/sigrok-firmware-utils 2014-08-03 22:09:07 +00:00
silo - Add USES=libtool 2014-07-07 21:56:17 +00:00
simlib
simsmith Java based Smith chart program. Performs single-frequency and sweep charting 2014-07-03 21:02:10 +00:00
step Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
svmlight In some straightforward cases, protect documentation behind 2014-08-04 03:40:14 +00:00
szip
udunits - Update to 2.2.17 2014-09-03 19:09:22 +00:00
v_sim Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
veusz Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
vmd Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
voro++
xfce4-equake-plugin
xmakemol Update the default version of GCC in the Ports Collection from GCC 4.7.4 2014-09-10 20:50:31 +00:00
Makefile - Add py-pysal 1.8.0 2014-09-04 16:24:31 +00:00