7e28204572
- Various website updates - Fixed the bowtie2-build issue that made TBB compilation fail PR: 208943 Submitted by: Joseph Mingrone <jrm@ftfl.ca> Approved by: Jason Bacon <bacon4000@gmail.com> (maintainer)
41 lines
876 B
Makefile
41 lines
876 B
Makefile
# Created by: Jason Bacon
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# $FreeBSD$
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PORTNAME= bowtie2
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PORTVERSION= 2.2.8
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DISTVERSIONPREFIX= v
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CATEGORIES= biology
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MAINTAINER= bacon4000@gmail.com
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COMMENT= Ultrafast, memory-efficient short read aligner
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LICENSE= GPLv3
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# May also work on other 64-bit platforms, but untested
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ONLY_FOR_ARCHS= amd64
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USES= gmake perl5 shebangfix
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USE_PERL5= run
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SHEBANG_FILES= scripts/*.pl
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USE_GITHUB= yes
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GH_ACCOUNT= BenLangmead
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post-install:
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${MKDIR} ${STAGEDIR}${DATADIR}/scripts
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${INSTALL_PROGRAM} \
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${WRKSRC}/bowtie2*-s \
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${WRKSRC}/bowtie2*-l \
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${STAGEDIR}${PREFIX}/bin
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${INSTALL_SCRIPT} \
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${WRKSRC}/scripts/*.sh \
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${WRKSRC}/scripts/*.pl \
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${STAGEDIR}${DATADIR}/scripts
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cd ${WRKSRC}/example && ${COPYTREE_SHARE} \
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'index reads reference' \
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${STAGEDIR}${EXAMPLESDIR}
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cd ${WRKSRC}/doc && ${COPYTREE_SHARE} \
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\* \
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${STAGEDIR}${DOCSDIR}
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.include <bsd.port.mk>
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