2e0d3b8d45
PYTHON options was added but it is disabled because one dependency is missing. Tests, however, pass with PYTHON=ON (and only with PYTHON=ON).
46 lines
1.6 KiB
Makefile
46 lines
1.6 KiB
Makefile
PORTNAME= smoldyn
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DISTVERSION= 2.69
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CATEGORIES= science
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MASTER_SITES= https://www.smoldyn.org/
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MAINTAINER= yuri@FreeBSD.org
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COMMENT= Biochemical simulator for molecular diffusion, surface interactions
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WWW= https://www.smoldyn.org/
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LICENSE= LGPL3
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LICENSE_FILE= ${WRKSRC}/License.txt
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LIB_DEPENDS= libtiff.so:graphics/tiff
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TEST_DEPENDS= ${PYTHON_PKGNAMEPREFIX}flaky>0:devel/py-flaky@${PY_FLAVOR} \
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${PYTHON_PKGNAMEPREFIX}matplotlib>0:math/py-matplotlib@${PY_FLAVOR} \
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${PYNUMPY}
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USES= cmake:testing compiler:c++11-lang gl localbase:ldflags python:test tar:tgz shebangfix xorg
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USE_GL= gl glu glut
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USE_XORG= xi xmu
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USE_LDCONFIG= yes
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SHEBANG_GLOB= *.py.in
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CMAKE_TESTING_ON= OPTION_EXAMPLES # all tests fail to run, see https://github.com/ssandrews/Smoldyn/issues/127
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OPTIONS_DEFINE= PYTHON
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OPTIONS_DEFAULT= # PYTHON Tests ONLY pass when PYTHON=ON despite biology/py-biosimulators-utils being missing
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OPTIONS_SUB= yes
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PYTHON_CMAKE_BOOL= OPTION_PYTHON
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PYTHON_USES= python
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PYTHON_CMAKE_ON= -DPython3_EXECUTABLE=${PYTHON_CMD}
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PYTHON_BUILD_DEPENDS= ${PYTHON_PKGNAMEPREFIX}setuptools>0:devel/py-setuptools@${PY_FLAVOR}
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PYTHON_RUN_DEPENDS= ${PYTHON_PKGNAMEPREFIX}biosimulators-utils>0:biology/py-biosimulators-utils@${PY_FLAVOR}
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PYTHON_BROKEN= pending biology/py-biosimulators-utils completion
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post-extract: # see https://github.com/ssandrews/Smoldyn/issues/127
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@${CHMOD} +x ${WRKSRC}/scripts/run_pyscript.py.in
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do-install-PYTHON-on: # workaround for https://github.com/ssandrews/Smoldyn/issues/129
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@cd ${BUILD_WRKSRC}/py && ${COPYTREE_SHARE} ${PORTNAME} ${STAGEDIR}${PYTHON_SITELIBDIR}
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@${RM} ${STAGEDIR}${PYTHON_SITELIBDIR}/${PORTNAME}/.DS_Store
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.include <bsd.port.mk>
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