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freebsd-ports/science
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Sunpoet Po-Chuan Hsieh 9a1f45d861 - Update to 1.10.0 
- Add LICENSE_FILE
- Remove outdated PORTSCOUT
- Re-enable SZIP option by default: it was changed unintentionally in r398300

Changes:	https://www.hdfgroup.org/ftp/HDF5/releases/hdf5-1.10/hdf5-1.10.0/src/hdf5-1.10.0-RELEASE.txt
		https://www.hdfgroup.org/HDF5/doc/ADGuide/Changes.html
2016-04-20 20:42:39 +00:00
..
2d-rewriter
afni Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
avogadro Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
bddsolve Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
bft
bodr Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
brian Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
buddy
cdcl
cdf
cdo - Update to 1.10.0 2016-04-20 20:42:39 +00:00
cgnslib - Update to 1.10.0 2016-04-20 20:42:39 +00:00
cgribex Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
checkmol
chemical-mime-data Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
chemtool Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
chemtool-devel Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
clhep science/clhep: Update version 2.2.0.8=>2.3.1.1 2016-04-10 21:01:55 +00:00
colt
crf++
dcl
devisor
dlpoly-classic Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
ecs - Update to 1.10.0 2016-04-20 20:42:39 +00:00
epte
fastcap
fasthenry
fisicalab Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
fvcom Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
fvcom-mpi Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
fvm - Update to 1.10.0 2016-04-20 20:42:39 +00:00
gchemutils Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
getdp Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
ghemical Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
ghmm Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
gnudatalanguage - Update to 1.10.0 2016-04-20 20:42:39 +00:00
gramps Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
grib_api - Update to 1.14.7 2016-04-17 18:40:09 +00:00
gromacs Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
gsmc
gtamsanalyzer
gwyddion Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
h5utils - Update to 1.10.0 2016-04-20 20:42:39 +00:00
harminv Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
hdf Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
hdf5 - Update to 1.10.0 2016-04-20 20:42:39 +00:00
hs-bio
InsightToolkit - Update to 1.10.0 2016-04-20 20:42:39 +00:00
isaac-cfd
jmol
jstrack Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
kalzium Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
kst2 Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
lamprop
libctl Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
libghemical Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
libint
libkml - Resolve conflict with archivers/minizip: rename libminizip to libkmlminizip 2016-04-07 13:28:46 +00:00
liblinear science/liblinear: Update to version 2.1. 2016-03-09 16:44:37 +00:00
liboglappth
libquantum
libsvm science/libsvm: Update to version 3.21. 2016-03-09 16:43:49 +00:00
libsvm-python
libxc Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
linsmith
massxpert Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
mbdyn Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
mcstas
mcstas-comps Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
medit Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
meep - Update to 1.10.0 2016-04-20 20:42:39 +00:00
mei Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
metaf2xml
minc2 - Update to 1.10.0 2016-04-20 20:42:39 +00:00
mol2ps
mpb - Update to 1.10.0 2016-04-20 20:42:39 +00:00
mpqc Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
mpqc-mpich
ncs Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
netcdf - Update to 1.10.0 2016-04-20 20:42:39 +00:00
netcdf-cxx Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
netcdf-fortran Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
nifticlib
openbabel Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
openkim
orthanc Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
orthanc-dicomweb Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
orthanc-postgresql Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
orthanc-webviewer Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Algorithm-SVMLight Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-3DBuilder Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-Bond-Find Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-Canonicalize Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-File-Mopac Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-File-PDB Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-File-SLN Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-File-SMARTS Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-File-SMILES Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-File-VRML Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-File-XYZ Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-FormulaPattern Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-InternalCoords Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-Isotope
p5-Chemistry-MacroMol Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-MidasPattern Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-Mok Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-Mol Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-Pattern Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-Reaction Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Chemistry-Ring Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Geo-BUFR - Update to 1.32 2016-04-18 17:28:50 +00:00
p5-Geo-Coordinates-Converter Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Geo-Coordinates-Converter-iArea Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Mcstas-Tools Don't leave dead symlinks when deinstalling. [1] (based on) 2016-04-14 10:40:38 +00:00
p5-PerlMol Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
p5-Physics-Unit
paje
paraview - Update to 1.10.0 2016-04-20 20:42:39 +00:00
pnetcdf Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
psychopy Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
pulseview Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
py-cdo Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
py-coards
py-DendroPy Update to 4.1.0 2016-04-07 20:30:11 +00:00
py-h5py - Update to 1.10.0 2016-04-20 20:42:39 +00:00
py-hcluster Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
py-mdp science/py-mdp: Update version 3.3=>3.5 2016-04-10 19:04:12 +00:00
py-mlpy Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
py-netCDF4 - Update to 1.10.0 2016-04-20 20:42:39 +00:00
py-obspy Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
py-paida Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
py-pupynere
py-pyaixi
py-pydap Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
py-pydicom
py-pysal - Update to 1.11.1 2016-04-09 12:30:11 +00:00
py-pyteomics Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
py-pyteomics.biolccc
py-scikit-fuzzy Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
py-scikit-learn Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
py-scikit-sparse Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
py-scimath Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
py-scipy Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
py-ws2300
pybrain Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
pycdf Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
pynn
qcl Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
qtresistors
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
R-cran-e1071
R-cran-eco
R-cran-Epi Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
R-cran-epicalc
R-cran-etm
R-cran-snow
R-cran-som
rubygem-ai4r
rubygem-cdo Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
rubygem-ruby-dcl Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
rubygem-ruby-netcdf Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
sigrok-cli Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
sigrok-firmware Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo - Update to 1.10.0 2016-04-20 20:42:39 +00:00
simlib
simsmith
step Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
svmlight
szip
udunits Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
v_sim Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
veusz Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
vmd Remove ${PORTSDIR}/ from dependencies, categories r, s, t, and u. 2016-04-01 14:25:16 +00:00
voro++
xfce4-equake-plugin
xmakemol
Makefile