..
ariadne
artemis
Support stage
2014-01-20 23:06:48 +00:00
avida
babel
Support stage
2014-01-15 22:44:13 +00:00
biococoa
biojava
According to the Porter's Handbook (5.12.2.3.) default options must be added to
2014-02-10 13:54:26 +00:00
blast
blat
boinc-simap
Drop maintainership BOINC ports, old machine running them gave up.
2014-02-04 17:54:29 +00:00
chemeq
Stage support
2014-01-18 15:55:42 +00:00
clustalw
consed
According to the Porter's Handbook (5.12.2.3.) default options must be added to
2014-02-10 13:54:26 +00:00
crux
Convert all USE_FORTRAN=yes to "USES=fortran, USE_GCC=yes". In most cases
2014-02-16 17:15:31 +00:00
embassy
Reduce over inclusion of bsd.port.mk
2014-01-15 22:48:32 +00:00
emboss
fasta
Reduce over inclusion of bsd.port.mk
2014-01-15 22:50:18 +00:00
fasta3
fastdnaml
Support staging
2014-02-16 11:32:43 +00:00
finchtv
According to the Porter's Handbook (5.12.2.3.) default options must be added to
2014-02-10 13:54:26 +00:00
fluctuate
Support staging
2014-02-16 11:35:00 +00:00
garlic
genpak
According to the Porter's Handbook (5.12.2.3.) default options must be added to
2014-02-10 13:54:26 +00:00
gff2ps
gmap
gperiodic
grappa
hmmer
iolib
Support stage
2014-01-20 17:02:11 +00:00
jalview
Fix properties on pkg-plist
2014-01-21 23:18:05 +00:00
lagan
lamarc
libgenome
biology/libgenome: Fix build on dragonfly
2014-02-05 23:47:48 +00:00
libsbml
Reduce over inclusion of bsd.port.mk
2014-01-15 22:50:50 +00:00
linux-foldingathome
mafft
mapm3
migrate
- Stagify; cleanup Makefile and reorder the knobs a bit
2014-01-29 12:08:29 +00:00
molden
mopac
mrbayes
mummer
According to the Porter's Handbook (5.12.2.3.) default options must be added to
2014-02-10 13:54:26 +00:00
muscle
ncbi-toolkit
njplot
According to the Porter's Handbook (5.12.2.3.) default options must be added to
2014-02-10 13:54:26 +00:00
ortep3
p5-AcePerl
- Stage support
2014-02-10 06:56:52 +00:00
p5-Bio-ASN1-EntrezGene
p5-Bio-Das
p5-Bio-Das-Lite
- fix pkg-plist
2014-01-30 07:34:25 +00:00
p5-Bio-GFF3
- Update to 1.9
2014-01-23 03:28:37 +00:00
p5-Bio-Glite
p5-Bio-Graphics
p5-Bio-MAGETAB
p5-Bio-NEXUS
- Stage support
2014-01-31 12:47:06 +00:00
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl
According to the Porter's Handbook (5.12.2.3.) default options must be added to
2014-02-10 13:54:26 +00:00
p5-bioperl-run
According to the Porter's Handbook (5.12.2.3.) default options must be added to
2014-02-10 13:54:26 +00:00
paml
According to the Porter's Handbook (5.12.2.3.) default options must be added to
2014-02-10 13:54:26 +00:00
phd2fasta
phrap
phred
phylip
phyml
- Stage support
2014-01-31 12:32:55 +00:00
platon
plink
Convert all USE_FORTRAN=yes to "USES=fortran, USE_GCC=yes". In most cases
2014-02-16 17:15:31 +00:00
plinkseq
- Stage support
2014-01-31 12:33:11 +00:00
povchem
primer3
protomol
Reduce over inclusion of bsd.port.mk
2014-01-15 22:51:26 +00:00
psi88
py-biopython
pycogent
pyfasta
- Convert to PYDISTUTILS_AUTOPLIST
2014-01-31 12:31:24 +00:00
pymol
python-nexus
- Convert to PYDISTUTILS_AUTOPLIST
2014-01-31 12:30:39 +00:00
rasmol
recombine
- Support staging
2014-02-16 11:39:42 +00:00
ruby-bio
Reduce over inclusion of bsd.port.mk
2014-01-15 22:52:28 +00:00
seaview
seqan
seqio
Support staging
2014-02-16 11:42:09 +00:00
seqtools
Fix old makeplist bug.
2014-02-12 14:03:25 +00:00
sim4
Support staging
2014-02-16 11:43:07 +00:00
ssaha
Deprecate ports unmaintained for which distillator is not able to find public distfiles
2014-02-07 18:50:30 +00:00
t_coffee
tinker
treepuzzle
treeviewx
tRNAscan-SE
biology/tRNAscan-SE: Fix hardcoded perl path
2014-02-05 23:44:50 +00:00
ugene
Unbreak the fetch: one of the documentation PDF files was rerolled.
2014-01-30 13:38:26 +00:00
velvet
According to the Porter's Handbook (5.12.2.3.) default options must be added to
2014-02-10 13:54:26 +00:00
wise
biology/wise: Add dragonfly support
2014-02-05 23:42:06 +00:00
xmolwt
Makefile
564a799c71