| .. |
|
adun
|
|
|
|
ariadne
|
|
|
|
artemis
|
|
|
|
avida
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
babel
|
|
|
|
belvu
|
|
|
|
biococoa
|
|
|
|
biojava
|
|
|
|
blast
|
- SUB_FILES += pkg-message
|
2010-01-09 23:51:26 +00:00 |
|
blat
|
|
|
|
boinc-simap
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
chemeq
|
|
|
|
clustalw
|
- Fix fetch error
|
2009-12-27 03:05:03 +00:00 |
|
consed
|
|
|
|
crimap
|
- actually remove old patch
|
2010-01-17 00:16:34 +00:00 |
|
crux
|
|
|
|
distribfold
|
|
|
|
dna-qc
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
dotter
|
|
|
|
embassy
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
emboss
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
fasta
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
fasta3
|
|
|
|
fastdnaml
|
|
|
|
finchtv
|
|
|
|
fluctuate
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
garlic
|
|
|
|
genpak
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
gff2ps
|
|
|
|
gmap
|
|
|
|
gperiodic
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
grappa
|
|
|
|
hmmer
|
|
|
|
iolib
|
|
|
|
jalview
|
|
|
|
kinemage
|
|
|
|
L-Breeder
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
lagan
|
|
|
|
lamarc
|
|
|
|
libgenome
|
|
|
|
libsbml
|
|
|
|
linux-foldingathome
|
|
|
|
lsysexp
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
mafft
|
|
|
|
mapm3
|
|
|
|
migrate
|
- Update to 3.1.1
|
2010-02-02 22:42:47 +00:00 |
|
molden
|
|
|
|
mopac
|
- Update to 7.1.11
|
2009-12-22 11:25:15 +00:00 |
|
mrbayes
|
|
|
|
mummer
|
|
|
|
muscle
|
|
|
|
ncbi-toolkit
|
- use $SUB_FILES to dynamically adjust pkg-message
|
2010-01-31 03:42:20 +00:00 |
|
njplot
|
|
|
|
ortep3
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
p5-AcePerl
|
- Remove unneeded dependencies which is in perl-5.8.9 dist
|
2010-01-29 14:52:21 +00:00 |
|
p5-Bio-ASN1-EntrezGene
|
|
|
|
p5-Bio-Das
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
p5-Bio-Glite
|
- Remove unneeded dependencies which is in perl-5.8.9 dist
|
2010-01-29 14:52:21 +00:00 |
|
p5-Bio-Graphics
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
p5-Bio-MAGETAB
|
- Update to 0.99
|
2010-02-03 08:25:35 +00:00 |
|
p5-Bio-NEXUS
|
|
|
|
p5-Bio-Phylo
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
p5-Bio-SCF
|
- Update to 1.03
|
2010-01-09 01:21:21 +00:00 |
|
p5-bioperl
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
p5-bioperl-run
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
paml
|
|
|
|
phd2fasta
|
|
|
|
phrap
|
|
|
|
phred
|
|
|
|
phylip
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
phyml
|
|
|
|
platon
|
|
|
|
povchem
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
primer3
|
- Update to 1.1.4
|
2009-12-18 02:55:57 +00:00 |
|
protomol
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
psi88
|
|
|
|
py-biopython
|
- Update to 1.53
|
2010-01-06 00:29:25 +00:00 |
|
pycogent
|
|
|
|
pyfasta
|
- Update to 0.3.7
|
2009-12-24 03:14:34 +00:00 |
|
pymol
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
python-nexus
|
python-nexus is a generic nexus (phylogenetics) file format(.nex, .trees)
|
2009-12-29 13:39:14 +00:00 |
|
rasmol
|
|
|
|
recombine
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
ruby-bio
|
|
|
|
seaview
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
seqio
|
For ports maintained by ports@FreeBSD.org, remove names and/or
|
2009-12-21 02:19:12 +00:00 |
|
sim4
|
|
|
|
ssaha
|
|
|
|
t_coffee
|
|
|
|
tinker
|
|
|
|
treepuzzle
|
|
|
|
treeviewx
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
tRNAscan-SE
|
|
|
|
velvet
|
|
|
|
wise
|
- SBU_FILES += pkg-message
|
2010-01-08 01:30:20 +00:00 |
|
xdrawchem
|
- update to jpeg-8
|
2010-02-05 11:46:55 +00:00 |
|
xmolwt
|
|
|
|
Makefile
|
python-nexus is a generic nexus (phylogenetics) file format(.nex, .trees)
|
2009-12-29 13:39:14 +00:00 |
