freebsd-ports/science
Yuri Victorovich 170221d59d science/PETSc: Update 3.9.2 -> 3.9.3
Reported by:	portscout
2018-07-04 20:25:29 +00:00
..
2d-rewriter
abinit science/abinit: Update 8.8.2 -> 8.8.3 2018-06-21 05:43:38 +00:00
afni Update math/gsl to 2.5 2018-06-23 08:27:13 +00:00
aircraft-datcom
ALPSCore
antioch Update math/gsl to 2.5 2018-06-23 08:27:13 +00:00
atompaw New port: science/atompaw: Tool for projector augmented wave functions for molecular simulations 2018-06-14 05:52:57 +00:00
avogadro Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
bddsolve
bft
bodr
brian Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
buddy
cdcl
cdf
cdo Mark ports broken on powerpc64, categories o-z. 2018-06-18 14:40:31 +00:00
cgnslib
cgribex
checkmol
chemical-mime-data
chemps2
chemtool
chemtool-devel
clhep
colt Mark as broken on powerpc64. 2018-06-08 02:35:17 +00:00
crf++
dcl
devisor
dft_tools New port: science/dft_tools: Interface to DFT codes in TRIQS 2018-06-17 02:42:52 +00:00
dkh
dlib-cpp
dlpoly-classic
eccodes Clean up Makefile 2018-06-28 21:26:47 +00:00
ecs
epte
erd
fastcap
fasthenry
fisicalab Update math/gsl to 2.5 2018-06-23 08:27:13 +00:00
fsom
fvcom
fvcom-mpi
fvm
gchemutils science/gchemutils: mark BROKEN if XUL option is chosen 2018-06-23 10:41:05 +00:00
gdma
getdp Update math/gsl to 2.5 2018-06-23 08:27:13 +00:00
ghemical
ghmm
gnudatalanguage Update math/gsl to 2.5 2018-06-23 08:27:13 +00:00
gramps
grib_api
gromacs science/gromacs: Chase the changed tarball 2018-06-16 21:07:10 +00:00
gsmc
gtamsanalyzer
gwyddion
h5utils
harminv
hdf
hdf5 Fix MASTER_SITES 2018-06-27 20:11:59 +00:00
hdf5-18
hypre Mark broken on powerpc64. 2018-06-08 02:39:46 +00:00
iboview Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
InsightToolkit
isaac-cfd
jstrack
kalzium Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
kalzium-kde4 Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
kst2 Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
lamprop
libaec
libcint science/libcint: Update 3.0.12 -> 3.0.13 2018-06-15 08:48:31 +00:00
libctl
libefp
libgeodecomp Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
libghemical
libint
libkml
liblinear Reset MAINTAINER on ports maintained by amutu@amutu.com 2018-06-22 08:04:38 +00:00
liboglappth
libquantum
libsvm Reset MAINTAINER on ports maintained by amutu@amutu.com 2018-06-22 08:04:38 +00:00
libsvm-python
libxc
linsmith
massxpert Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
mbdyn science/mbdyn: Take maintainership. 2018-06-22 08:08:30 +00:00
mcstas
mcstas-comps
mcxtrace
mcxtrace-comps
medit
meep Update math/gsl to 2.5 2018-06-23 08:27:13 +00:00
mei
metaf2xml
metaphysicl
minc2
mol2ps
MOOSE-neural-simulator Update math/gsl to 2.5 2018-06-23 08:27:13 +00:00
mpb
mpqc Mark these ports as broken on aarch64, and, where appropriate, on armvX. 2018-06-22 01:15:19 +00:00
mpqc-mpich
ncs
netcdf
netcdf-cxx
netcdf-fortran
nifticlib
openbabel science/openbabel: Take maintainership; Add the GUI option using wxWidgets-3.0 2018-06-12 07:39:34 +00:00
openkim
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol - Add LICENSE 2018-06-26 09:07:15 +00:00
p5-Chemistry-Pattern
p5-Chemistry-Reaction Add LICENSE 2018-06-05 18:57:18 +00:00
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
paje
paraview Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
pcmsolver Mark ports broken on powerpc64, categories o-z. 2018-06-18 14:40:31 +00:00
PETSc science/PETSc: Update 3.9.2 -> 3.9.3 2018-07-04 20:25:29 +00:00
pnetcdf
psychopy Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
pulseview Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
py-abipy science/py-abipy: Change FLAVOR -> PY_FLAVOR 2018-06-19 01:18:08 +00:00
py-cdo Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-coards
py-DendroPy
py-dlib Mark these ports as broken on aarch64, and, where appropriate, on armvX. 2018-06-22 01:15:19 +00:00
py-gsd
py-h5py Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-hcluster Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-kinematics Add py-kinematics 0.0.7 2018-06-24 20:05:42 +00:00
py-MDAnalysis Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-MDAnalysisTests Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-mdp Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-mlpy Update math/gsl to 2.5 2018-06-23 08:27:13 +00:00
py-mmtf-python Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-netCDF4 science/py-netCDF4: Add USE_PYTHON=concurrent 2018-06-19 00:03:37 +00:00
py-obspy Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-OpenFermion science/py-OpenFermion: Update 0.6 -> 0.7 2018-06-26 19:42:18 +00:00
py-openpiv Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-paida Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-pupynere
py-pyaixi
py-pydicom - Update to 1.1.0 2018-06-22 03:06:51 +00:00
py-pymatgen Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-pymol Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-pyosf Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-PyQuante Mark as broken on aarch64. 2018-06-25 04:54:53 +00:00
py-pysal Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-pyteomics Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-pyteomics.biolccc
py-qspin
py-quantities science/py-quantities: Update 0.12.1 -> 0.12.2 2018-07-04 19:21:46 +00:00
py-rmf New port: science/py-rmf: Library to support reading and writing of Rich Molecular Format files 2018-07-01 05:22:27 +00:00
py-ScientificPython science/py-ScientificPython: Change WWW URL; Change to CHEESESHOP 2018-06-30 16:49:08 +00:00
py-scikit-fuzzy Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-scikit-learn Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-scikit-sparse Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-scimath Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-scipy
py-scoria Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
py-SimpleSpectral New port: science/py-SimpleSpectral: Simplified scipy.signal.spectral module with only pyFFTW support 2018-06-18 02:34:02 +00:00
py-spglib science/py-spglib: Fix typo in COMMENT 2018-06-19 02:20:42 +00:00
py-tensorflow Correction to r473019: Revert the unintended change to the 'Created by' headers. 2018-06-22 08:28:00 +00:00
py-veusz Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
py-ws2300
pybrain Use PY_FLAVOR for dependencies. 2018-06-20 17:05:41 +00:00
pycdf
pynn
qcl
qtresistors Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm - Update to 0.6-2.1 2018-06-20 03:34:55 +00:00
R-cran-fastICA
R-cran-kernlab
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit science/rdkit: Update 2018_03_1 -> 2018_03_2 2018-06-17 19:15:55 +00:00
rmf New port: science/rmf: Library to support reading and writing of Rich Molecular Format files 2018-06-29 09:04:22 +00:00
rubygem-ai4r
rubygem-cdo
rubygem-rgeo
rubygem-rgeo-geojson
rubygem-rgeo-proj4
rubygem-rgeo-shapefile
rubygem-ruby-dcl
rubygem-ruby-netcdf
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
simlib
simsmith
spglib New port: science/spglib: C library for finding and handling crystal symmetries 2018-06-15 17:42:24 +00:00
step Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
step-kde4 Replace bsd.qt.mk by Uses/qt.mk and Uses/qt-dist.mk 2018-06-28 17:39:53 +00:00
svmlight
szip Auto-accept SZIP license, otherwise hundreds of ports are skipped 2018-06-06 12:13:19 +00:00
tfel Adjust USES to fix builds on gcc-based architectures. 2018-06-18 19:03:03 +00:00
triqs science/triqs: Broken on i386 2018-06-21 05:57:43 +00:00
udunits
v_sim
vmd
voro++
xfce4-equake-plugin
xmakemol
Makefile New port: science/py-rmf: Library to support reading and writing of Rich Molecular Format files 2018-07-01 05:22:27 +00:00