freebsd-ports/biology
Martin Wilke 5da99a81fe p5-Bio-MAGETAB contains the core MAGE-TAB Utilities Perl modules. This
is a beta release. All functions have now been implemented and most
have test suites; the exceptions include the modules involved in
export of MAGE-TAB documents, which are still a little experimental in
nature. The API is mostly finalised (and fully documented), but some
details may yet change where necessary to improve usability.

WWW: http://search.cpan.org/dist/Bio-MAGETAB/

PR:		ports/136021
Submitted by:	Wen Heping <wenheping at gmail.com>
2009-07-01 09:03:28 +00:00
..
adun - fix build for custom LOCALBASE in UL subdir 2009-06-02 02:33:05 +00:00
ariadne
artemis
avida bump PORTREVISION after cmake update 2009-03-24 19:13:32 +00:00
babel
belvu
biococoa
biojava - Update to 1.7 2009-05-01 09:33:42 +00:00
blast
blat
boinc-simap
chemeq
clustalw
consed Welcome to the new linux ports infrastructure which allows using 2009-03-19 17:28:51 +00:00
crimap
crux Update to Crux 1.1.0. 2009-06-21 06:18:51 +00:00
distribfold
dna-qc
dotter
embassy - Update to 6.0.0 2009-06-16 22:42:34 +00:00
emboss - Update to 0.1.24 2009-03-14 15:17:06 +00:00
fasta
fasta3 - Update to 35.4.7 [1] 2009-06-09 07:53:37 +00:00
fastdnaml
finchtv
fluctuate
garlic
genpak
gff2ps
gmap
gperiodic
grappa
hmmer
jalview
kinemage
L-Breeder
lagan
lamarc - Mark most of my ports MAKE_JOBS_SAFE=yes 2009-05-16 06:27:56 +00:00
libgenome
libsbml LibSBML is an open-source programming library to help you read, write, 2009-05-28 23:36:10 +00:00
linux-foldingathome
lsysexp
mafft
mapm3
migrate
molden
mopac
mrbayes Fix LIB_DEPENDS on devel/readline: its sh lib version was bumped recently from 2009-05-12 11:28:17 +00:00
mummer
muscle
ncbi-toolkit - Update to 2009.03.01 2009-03-28 16:59:39 +00:00
njplot Convert most of remaining ports that depend on xorg-libraries to 2009-06-09 15:33:28 +00:00
ortep3
p5-AcePerl - Mark most of my ports MAKE_JOBS_SAFE=yes 2009-05-16 06:27:56 +00:00
p5-Bio-ASN1-EntrezGene
p5-Bio-Das - Update to 1.11 2009-06-08 09:30:07 +00:00
p5-Bio-Glite Bio::Glite is an interface to G-language Genome Analysis Environment 2009-04-02 18:24:59 +00:00
p5-Bio-Graphics - Update to 1.95 2009-06-02 21:34:06 +00:00
p5-Bio-MAGETAB p5-Bio-MAGETAB contains the core MAGE-TAB Utilities Perl modules. This 2009-07-01 09:03:28 +00:00
p5-Bio-Phylo
p5-bioperl
p5-bioperl-run - Update to 1.6.1 2009-03-19 20:54:05 +00:00
paml
phd2fasta
phrap
phred
phylip
platon
povchem
primer3
protomol
psi88
py-biopython
pycogent PyCogent is a software library for genomic biology. It is a fully integrated 2009-06-22 12:46:56 +00:00
pymol - Update lang/python26 and make Python 2.6.2 to the default Python version 2009-06-08 22:30:55 +00:00
rasmol Convert most of remaining ports that depend on xorg-libraries to 2009-06-09 15:33:28 +00:00
recombine
ruby-bio
seaview
seqio
sim4
ssaha
t_coffee
tinker
treepuzzle
treeviewx
tRNAscan-SE
wise
xdrawchem
xmolwt
Makefile p5-Bio-MAGETAB contains the core MAGE-TAB Utilities Perl modules. This 2009-07-01 09:03:28 +00:00