fb16dfecae
Commit b7f05445c0
has added WWW entries to port Makefiles based on
WWW: lines in pkg-descr files.
This commit removes the WWW: lines of moved-over URLs from these
pkg-descr files.
Approved by: portmgr (tcberner)
17 lines
632 B
Plaintext
17 lines
632 B
Plaintext
SRA tools is a toolkit for using data in the INSDC Sequence Read Archives.
|
|
|
|
SRAs operated by International Nucleotide Sequence Database Collaboration
|
|
houses sequence reads and alignments generated by "next-gen" sequencers.
|
|
SRA tools allows conversion of .sra files, which INSDC SRAs maintain,
|
|
from/to other formats that the 'next-gen' sequenecers generate including:
|
|
|
|
* csfasta/csqual (ABI SOLiD)
|
|
* fastq (and fasta for writing)
|
|
* hdf5 (PacBio, reading only)
|
|
* qseq (older Illumina)
|
|
* sam (writing only) / bam (reading only)
|
|
* sff
|
|
|
|
The toolkit uses NCBI-VDB back-end enabling seamless access to remote SRA data
|
|
and local SRA files.
|