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freebsd-ports/science
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Thierry Thomas 111d6e8555 Upgrade to 3.0.2. 
The new version brings important support for Abaqus(TM) and will be supported
in a future release of CalculiX.

PR:		216315
Submitted by:	Pedro F. Giffuni
2017-11-25 10:43:57 +00:00
..
2d-rewriter
afni
avogadro devel/boost-*: update to 1.65.1 2017-09-25 00:08:16 +00:00
bddsolve devel/boost-*: update to 1.65.1 2017-09-25 00:08:16 +00:00
bft
bodr
brian
buddy
cdcl
cdf
cdo Update to 4.5.0 2017-10-21 20:18:16 +00:00
cgnslib
cgribex
checkmol
chemical-mime-data
chemps2 New port: science/chemps2: Spin-adapted implementation of DMRG for ab initio quantum chemistry 2017-11-23 05:58:51 +00:00
chemtool
chemtool-devel
clhep
colt
crf++
dcl
devisor
dkh New port: science/dkh: Wolf, Reiher, and Hess's Douglas-Kroll-Hess relativistic correction 2017-11-13 06:08:40 +00:00
dlpoly-classic
ecs Chase metis-edf's upgrade. 2017-11-16 20:55:27 +00:00
epte
erd New port: science/erd: AcesIII electron repulsion integrals 2017-11-14 18:44:05 +00:00
fastcap
fasthenry
fisicalab
fvcom
fvcom-mpi
fvm
gchemutils
gdma New port: science/gdma: Anthony Stone's Gaussian Distributed Multipole Analysis 2017-11-18 05:12:35 +00:00
getdp
ghemical
ghmm
gnudatalanguage Don't try to look for PLIST under .OBJDIR 2017-11-02 04:07:23 +00:00
gramps
grib_api Update to 1.24.0 2017-11-12 19:09:49 +00:00
gromacs devel/boost-*: update to 1.65.1 2017-09-25 00:08:16 +00:00
gsmc
gtamsanalyzer
gwyddion
h5utils
harminv
hdf
hdf5
hdf5-18 Fix libhdf5-18.settings and suffix usage in tools. 2017-11-12 20:44:50 +00:00
hs-bio
hypre
iboview devel/boost-*: update to 1.65.1 2017-09-25 00:08:16 +00:00
InsightToolkit science/InsightToolkit: Update to 4.12.2 2017-09-23 12:12:08 +00:00
isaac-cfd
jstrack
kalzium
kst2 Update to 4.5.0 2017-10-21 20:18:16 +00:00
lamprop
libaec Update to 1.0.2 2017-11-12 19:09:54 +00:00
libctl
libefp New port: science/libefp: Effective fragment potential method in quantum chemistry 2017-11-14 04:31:58 +00:00
libgeodecomp devel/boost-*: update to 1.65.1 2017-09-25 00:08:16 +00:00
libghemical
libint
libkml devel/google{test,mock}: update to 1.8.0.358 2017-09-25 00:51:02 +00:00
liblinear
liboglappth
libquantum
libsvm
libsvm-python
libxc
linsmith
massxpert
mbdyn
mcstas
mcstas-comps
medit
meep Fix options usage. 2017-10-27 12:19:20 +00:00
mei
metaf2xml Fix whitespace issues (mixed tab/spaces, alignment) in a few ports. 2017-10-31 14:51:53 +00:00
minc2 Update to 4.5.0 2017-10-21 20:18:16 +00:00
mol2ps
mpb
mpqc Remove USES=execinfo. 2017-09-22 10:48:28 +00:00
mpqc-mpich
ncs
netcdf Update to 4.5.0 2017-10-21 20:18:16 +00:00
netcdf-cxx Update to 4.5.0 2017-10-21 20:18:16 +00:00
netcdf-fortran Update to 4.5.0 2017-10-21 20:18:16 +00:00
nifticlib
openbabel
openkim For ports that are explicitly enabled on armv6, also enable them 2017-10-10 21:31:30 +00:00
orthanc - update from 1.1.0 to 1.3.0 2017-10-30 14:45:19 +00:00
orthanc-dicomweb - update from 0.3 to 0.4 2017-10-30 14:57:16 +00:00
orthanc-postgresql devel/boost-*: update to 1.65.1 2017-09-25 00:08:16 +00:00
orthanc-webviewer - update from 2.2 to 2.3 2017-10-30 14:20:02 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools
p5-PerlMol
p5-Physics-Unit
paje
paraview Remove USES=execinfo. 2017-09-22 10:48:28 +00:00
pcmsolver New port: science/pcmsolver: API for the Polarizable Continuum Model 2017-11-14 18:05:42 +00:00
pnetcdf
psychopy
pulseview science/pulseview: Update to version 0.4.0, switch to QT5. 2017-10-11 21:50:30 +00:00
py-cdo Update to 1.3.5 2017-10-03 15:35:02 +00:00
py-coards
py-DendroPy
py-h5py
py-hcluster
py-mdp
py-mlpy
py-netCDF4 Update to 4.5.0 2017-10-21 20:18:16 +00:00
py-obspy
py-paida
py-pupynere
py-pyaixi
py-pydicom
py-pysal Update to 1.14.3 2017-11-04 22:56:47 +00:00
py-pyteomics
py-pyteomics.biolccc
py-qspin New port: science/py-qspin: Learn quantum spin and entanglement 2017-11-10 21:55:26 +00:00
py-scikit-fuzzy science/py-scikit-fuzzy: Update to 0.3.1 2017-10-09 13:32:58 +00:00
py-scikit-learn
py-scikit-sparse
py-scimath
py-scipy
py-scoria New port: science/py-scoria: Lightweight molecule manipulation codebase 2017-11-16 18:27:47 +00:00
py-tensorflow Mark BROKEN: fails to build 2017-11-05 16:43:30 +00:00
py-ws2300
pybrain
pycdf Update to 4.5.0 2017-10-21 20:18:16 +00:00
pynn
qcl
qtresistors
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-kernlab
R-cran-snow
R-cran-som
R-cran-udunits2
rubygem-ai4r Update LICENSE 2017-09-24 18:49:56 +00:00
rubygem-cdo
rubygem-ruby-dcl
rubygem-ruby-netcdf Update to 4.5.0 2017-10-21 20:18:16 +00:00
sigrok-cli science/sigrok-cli: Update to version 0.7.0. 2017-10-11 21:48:56 +00:00
sigrok-firmware
sigrok-firmware-fx2lafw science/sigrok-firmware-fx2laf: Update to version 0.1.5. 2017-10-11 21:48:08 +00:00
sigrok-firmware-utils
silo
simlib
simsmith
step
svmlight
szip
tfel Upgrade to 3.0.2. 2017-11-25 10:43:57 +00:00
udunits Convert PORTDATA=* and PORTDOCS=* to PLIST entries 2017-10-08 13:49:43 +00:00
v_sim Update to 4.5.0 2017-10-21 20:18:16 +00:00
veusz
vmd Update to 4.5.0 2017-10-21 20:18:16 +00:00
voro++
xfce4-equake-plugin
xmakemol
Makefile New port: science/chemps2: Spin-adapted implementation of DMRG for ab initio quantum chemistry 2017-11-23 05:58:51 +00:00