Wen Heping 84043117ea - Update to 1.1.1		2019-02-28 07:18:24 +00:00
..
2d-rewriter
abinit	science/abinit: Add the 'test' target	2019-02-27 06:09:17 +00:00
afni
agrum	Remove bogus dependency, agrum links against libomp from llvm port	2019-02-16 13:18:10 +00:00
aircraft-datcom
ALPSCore
antioch
atom
atompaw
avogadro
avogadro2
avogadrolibs	Move: science/mmtf -> science/mmtf-cpp	2019-02-16 08:02:02 +00:00
bagel
bddsolve
berkeleygw
bodr
brian
buddy
cdcl
cdf
cdo	Update to 1.9.6	2019-02-09 23:27:28 +00:00
cgnslib
cgribex	Update to 1.9.0	2019-02-05 13:48:25 +00:00
checkmol
chemical-mime-data	Backout r493559	2019-02-22 08:12:39 +00:00
chemps2
chemtool
chemtool-devel
chrono
clhep
clipper
code_saturne
colt
coordgenlibs
coot
cp2k
crf++
dalton
datawarrior
dcl
devisor
dft_tools
dftbplus
dkh
dlib-cpp	science/dlib-cpp and science/py-dlib: Update to 19.16.	2019-02-23 16:19:52 +00:00
dlpoly-classic
drawxtl
dvc	science/dvc: Update 0.28.2 -> 0.29.0	2019-02-22 05:18:38 +00:00
eccodes	Update to 2.12.0	2019-02-19 19:46:50 +00:00
elk
epte
erd
erkale	Remove bogus dependency, erkale links against libomp from llvm	2019-02-16 13:19:29 +00:00
erkale-pseudopotentials
esys-particle
fastcap
fasthenry
fisicalab
fleur
fsom
fvcom
fvcom-mpi
gabedit	science/gabedit: Update 2.5.0 -> 2.5.1	2019-02-10 18:42:25 +00:00
gamess-us
gchemutils
gdma
getdp
ghemical
ghmm
gnudatalanguage	wxGTK3.0: switch to gtk3 and webkit2	2019-02-25 12:47:20 +00:00
gpaw-setups
gramps
grib_api
gromacs	science/gromacs: Update 2019 -> 2019.1	2019-02-17 02:32:07 +00:00
gsmc
gtamsanalyzer
gwyddion
h5utils
h5z-zfp
harminv
hdf
hdf5
hdf5-18
healpix	science/healpix: fix build with GCC-based architectures	2019-02-10 17:09:19 +00:00
hypre
iboview
InsightToolkit
isaac-cfd
jdftx
jmol	science/jmol: Add the executable jmoldata for headless operation	2019-02-13 10:21:20 +00:00
jstrack
kalzium	Update KDE Applications to 18.12.2	2019-02-08 05:11:13 +00:00
kst2
lammps
lamprop
latte
libaec	Update to 1.0.4	2019-02-12 21:03:10 +00:00
libccp4
libcint
libctl
libefp
libgeodecomp
libghemical
libgridxc	science/libgridxc: Update 0.8.4 -> 0.8.5	2019-02-17 02:24:01 +00:00
libint
libint2
libkml
liblinear
libmsym
liboglappth
libquantum
libssm
libsvm
libsvm-python
libxc
liggghts
lm
luscus
madness
maeparser
massxpert
mbdyn
mcstas
mcstas-comps	science/mcstas-comps: Update to 2.5 and unbreak	2019-02-20 22:34:23 +00:00
mcxtrace
mcxtrace-comps
mdynamix
medit
meep
metaf2xml
metaphysicl
minc2
mmdb2
mmtf-cpp	Move: science/mmtf -> science/mmtf-cpp	2019-02-16 08:02:02 +00:00
mol2ps
molgif
molscript	New port: science/molscript: Display 3D molecules in schematic and detailed representations	2019-02-13 07:00:58 +00:00
molsketch
MOOSE-neural-simulator
mpb
mpqc
msms
multiwfn
namd
netcdf
netcdf-cxx
netcdf-fortran
nifticlib
nwchem	science/nwchem: Update 6.8.1.20190125 -> 6.8.1.20190222	2019-02-26 08:34:30 +00:00
nwchem-data
octopus
openbabel
openkim
openmx
opensim-core
openstructure	science/openstructure: python:2.7 for now	2019-02-16 19:05:32 +00:00
opsin	New port: science/opsin: Open Parser for Systematic IUPAC Nomenclature of chemical names	2019-02-14 00:54:56 +00:00
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR	Update to 1.37	2019-02-17 19:39:21 +00:00
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools	science/p5-Mcstas-Tools: Merge {do,post}-install	2019-02-27 13:15:02 +00:00
p5-PerlMol
p5-Physics-Unit
paje
paraview	science/paraview: update to 5.6.0	2019-02-07 16:58:51 +00:00
pcmsolver	science/pcmsolver: Update 1.2.2 -> 1.2.3	2019-02-17 02:36:15 +00:00
PETSc
pnetcdf
psychopy
pulseview
py-abipy	py-abipy is not compatible with python2	2019-02-04 21:07:51 +00:00
py-asdf	Update to 2.3.2	2019-02-20 20:47:15 +00:00
py-ase
py-avogadrolibs
py-cdo
py-chempy
py-coards
py-DendroPy
py-dlib	science/dlib-cpp and science/py-dlib: Update to 19.16.	2019-02-23 16:19:52 +00:00
py-gpaw
py-GPy
py-GPyOpt
py-gsd
py-h5py
py-hcluster
py-kinematics
py-lifelines	science/py-lifelines: update to 0.19.5	2019-02-27 22:12:09 +00:00
py-MDAnalysis
py-MDAnalysisTests
py-mdp
py-mlpy
py-mmtf-python
py-molmod
py-netCDF4
py-obspy	- Update to 1.1.1	2019-02-28 07:18:24 +00:00
py-oddt	New port: science/py-oddt: Open Drug Discovery Toolkit	2019-02-09 22:51:25 +00:00
py-OpenFermion
py-openpiv
py-paida
py-paramz
py-phono3py
py-phonopy
py-pupynere
py-pyaixi
py-pydicom	- Update to 1.2.2	2019-02-13 23:49:54 +00:00
py-PyFR
py-pygeodesy
py-pymatgen	science/py-pymatgen: python-3 only	2019-02-04 19:53:14 +00:00
py-pymol	Unbreak INDEX	2019-02-16 10:32:12 +00:00
py-pyosf
py-PyQuante
py-pysal
py-pyteomics
py-pyteomics.biolccc
py-qspin
py-quantities	science/py-quantities: Update 0.12.2 -> 0.12.3	2019-02-23 16:06:52 +00:00
py-rmf
py-rmsd
py-ScientificPython
py-scikit-fuzzy
py-scikit-learn
py-scikit-sparse
py-scimath
py-scipy
py-scoria
py-SimpleSpectral
py-spglib
py-veusz
py-ws2300
pybrain
pycdf
pynn
qbox	science/qbox: fix build on powerpc*	2019-02-28 04:32:33 +00:00
qcl
qmcpack
qtresistors
quantum-espresso
quantum-espresso-pseudopotentials
qwalk
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-fastICA
R-cran-kernlab
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit	science/rdkit: Update 2018_09_1 -> 2018_09_2	2019-02-23 07:33:55 +00:00
rmf
rubygem-ai4r
rubygem-cdo	Update to 1.5.0	2019-02-16 22:54:45 +00:00
rubygem-rgeo
rubygem-rgeo-geojson
rubygem-rgeo-proj4
rubygem-rgeo-shapefile	Update to 2.0.0	2019-02-24 17:56:50 +00:00
rubygem-ruby-dcl
rubygem-ruby-netcdf
scidavis
siesta
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo
simbody
simint
simlib
simsmith
sparta
spglib	science/spglib: 1.11.2.1 -> 1.12.2	2019-02-10 01:33:34 +00:00
step	Update KDE Applications to 18.12.2	2019-02-08 05:11:13 +00:00
svmlight
szip	Update to 2.1.1	2019-02-24 17:56:03 +00:00
teem
tfel
tinker
triqs
udunits
v_sim	- Add USES=compiler:c11 to fix build on GCC architectures;	2019-02-27 20:48:49 +00:00
vipster	science/vipster: Update 1.14.1a -> 1.15b	2019-02-24 19:42:02 +00:00
vmd
voro++
wannier90
wxmacmolplt	Unmark as broken now that wxgtk31 is hooked into the framework	2019-02-25 12:53:00 +00:00
xcrysden
xdrawchem
xfce4-equake-plugin
xmakemol
yoda
Makefile	New port: science/dvc: Git for data scientists: manage code and data together	2019-02-18 19:37:36 +00:00