freebsd-ports/biology
Ade Lovett 54a0b86543 Mass-conversion to the USE_AUTOTOOLS New World Order. The code present
in bsd.autotools.mk essentially makes this a no-op given that all the
old variables set a USE_AUTOTOOLS_COMPAT variable, which is parsed in
exactly the same way as USE_AUTOTOOLS itself.

Moreover, USE_AUTOTOOLS has already been extensively tested by the GNOME
team -- all GNOME 2.12.x ports use it.

Preliminary documentation can be found at:
	http://people.FreeBSD.org/~ade/autotools.txt

which is in the process of being SGMLized before introduction into the
Porters Handbook.

Light blue touch-paper.  Run.
2005-11-15 06:52:12 +00:00
..
ariadne
artemis
avida
babel
biojava
blast
chemeq - Mark it as DEPRECATED - master site disapeared 2005-11-11 14:40:25 +00:00
clustalw
coalesce
crimap
deft - Mark it as DEPRECATED - master site disapeared 2005-11-11 14:40:32 +00:00
distribfold
dna-qc
embassy
emboss Mass-conversion to the USE_AUTOTOOLS New World Order. The code present 2005-11-15 06:52:12 +00:00
fasta
fasta3
fastdnaml
finchtv
flip Mark DEPRECATED since upstream is unmaintained and mastersite is gone. 2005-10-29 14:09:33 +00:00
fluctuate
garlic
genpak
gff2ps
gperiodic Bump PORTREVISION to chase the glib20 shared library update. 2005-11-05 05:22:06 +00:00
grappa
hmmer
kinemage
L-Breeder - Mark it as DEPRECATED (mastersite disapeared) 2005-11-11 14:29:09 +00:00
lamarc
libgenome Mass-conversion to the USE_AUTOTOOLS New World Order. The code present 2005-11-15 06:52:12 +00:00
lsysexp Bump PORTREVISION to chase the glib20 shared library update. 2005-11-05 05:22:06 +00:00
migrate
molden
mopac
nab
ncbi-toolkit - Update to 20050605 2005-10-11 22:33:34 +00:00
ortep3
p5-AcePerl
p5-Bio-ASN1-EntrezGene Add p5-Bio-ASN1-EntrezGene, a Regular expression-based Perl Parser for 2005-10-15 20:09:50 +00:00
p5-Bio-Das
p5-bioperl
paml Update to 3.14b 2005-11-10 01:21:42 +00:00
phylip
platon
povchem
primer3
psi88
py-biopython Update to 1.41 2005-11-11 01:15:35 +00:00
pymol Update to 0.9.8 2005-10-10 09:08:22 +00:00
rasmol
recombine
ruby-bio With portmgr hat on, reset maintainership of knu's ports since he has 2005-11-11 01:18:01 +00:00
seaview
seqio
sim4
t_coffee BROKEN: Unfetchable 2005-10-28 06:38:35 +00:00
tinker
treepuzzle
treeviewx Bump PORTREVISION to chase the glib20 shared library update. 2005-11-05 05:22:06 +00:00
tRNAscan-SE
wise
xdrawchem Checking MACHINE_ARCH is deprecated. 2005-09-23 16:21:45 +00:00
xmolwt
Makefile Remove expired ports 2005-11-05 09:07:44 +00:00