Yuri Victorovich 34d1c3d5f2 science/lammps: Update 28Feb2019 -> 29Mar2019		2019-03-31 17:33:52 +00:00
..
2d-rewriter
abinit	science/abinit: Broken on i386	2019-03-02 23:43:01 +00:00
afni
agrum	Switch to devel/llvm80 for DEFAULT_VERSIONS	2019-03-20 12:23:25 +00:00
aircraft-datcom
ALPSCore
antioch
atom
atompaw
avogadro2
avogadrolibs
bagel
bddsolve
berkeleygw
bodr
brian
buddy
cdcl
cdf
cdo	Update science/netcdf to 4.6.3	2019-03-02 17:45:58 +00:00
cgnslib	- Upgrade science/cgnslib to 3.4.0	2019-03-06 19:49:56 +00:00
cgribex
checkmol
chemical-mime-data	Backout r493559	2019-02-22 08:12:39 +00:00
chemps2
chemtool
chemtool-devel	Fix build on gcc-based architectures:	2019-03-13 05:09:02 +00:00
chrono
clhep
clipper
code_saturne	- Upgrade science/cgnslib to 3.4.0	2019-03-06 19:49:56 +00:00
colt
coordgenlibs	science/coordgenlibs: Update 1.2.1 -> 1.2.2	2019-03-16 05:51:15 +00:00
coot
cp2k
crf++
dalton
datawarrior
dcl
devisor
dftbplus
dkh
dlib-cpp	Update science/dlib-cpp and science/py-dlib to 19.17.	2019-03-30 14:42:52 +00:00
dlpoly-classic
drawxtl
dvc	Remove unused USE_PYTHON values.	2019-03-13 13:03:11 +00:00
eccodes	Update science/netcdf to 4.6.3	2019-03-02 17:45:58 +00:00
elk
epte
erd
erkale	Mark as broken on aarch64: fails to configure:	2019-03-29 22:20:47 +00:00
erkale-pseudopotentials
esys-particle
fastcap
fasthenry
fisicalab
fleur
fsom
fvcom
fvcom-mpi
gabedit
gamess-us
gchemutils	Drop USES=gecko	2019-03-29 20:16:36 +00:00
gdma
getdp
ghemical
ghmm
gnudatalanguage	Update science/netcdf to 4.6.3	2019-03-02 17:45:58 +00:00
gpaw-setups
gramps
grib_api	Update science/netcdf to 4.6.3	2019-03-02 17:45:58 +00:00
gromacs
gsmc
gtamsanalyzer
gwyddion	Fix build on gcc-based architectures:	2019-03-13 05:13:22 +00:00
h5utils
h5z-zfp
harminv
hdf
hdf5
hdf5-18
healpix	Mark broken on aarch64:	2019-03-29 23:00:31 +00:00
hypre	science/hypre: unbreak with libc++ 8	2019-03-04 18:35:02 +00:00
iboview
InsightToolkit	- Update devel/gdcm to 2.8.9.	2019-03-10 00:48:01 +00:00
isaac-cfd
jdftx	science/jdftx: Fix OCTAVE option	2019-03-30 19:52:19 +00:00
jmol	science/jmol: Update 14.29.31 -> 14.29.32	2019-03-30 18:34:00 +00:00
jstrack
kalzium	Update KDE Applications to 18.12.3	2019-03-07 18:35:32 +00:00
kst2	science/kst2: remove QT4/QT5 options (Qt4 deprecation)	2019-03-16 17:54:45 +00:00
lammps	science/lammps: Update 28Feb2019 -> 29Mar2019	2019-03-31 17:33:52 +00:00
lamprop
latte
libaec
libccp4	Mark as broken on aarch64:	2019-03-29 21:06:52 +00:00
libcint	science/libcint: Update 3.0.14 -> 3.0.15	2019-03-20 18:04:47 +00:00
libctl
libefp
libgeodecomp	science/libgeodecomp: remove QT4 option (Qt4 drpecation)	2019-03-16 18:00:13 +00:00
libghemical
libgridxc
libint
libint2
libkml
liblinear
libmsym
liboglappth
libquantum
libssm
libsvm
libsvm-python
libxc
liggghts
lm	Update devel/protobuf to 3.7.1	2019-03-31 13:41:02 +00:00
luscus
madness
maeparser	science/maeparser: Update 1.0.1 -> 1.1	2019-03-02 07:13:36 +00:00
massxpert	science/massxpert: Update 3.4.0 -> 3.6.1	2019-03-09 23:23:33 +00:00
mbdyn
mcstas
mcstas-comps
mcxtrace
mcxtrace-comps
mdynamix
medit
meep
metaf2xml
metaphysicl
minc2	Update science/netcdf to 4.6.3	2019-03-02 17:45:58 +00:00
mmdb2
mmtf-cpp
mol2ps
molgif
molscript
molsketch	science/molsketch: Update 0.5.2 -> 0.6.0	2019-03-19 06:19:42 +00:00
mpb
mpqc	Update devel/doxygen to 1.8.15	2019-03-05 21:20:27 +00:00
msms
multiwfn
namd
netcdf	Update science/netcdf to 4.6.3	2019-03-02 17:45:58 +00:00
netcdf-cxx	Update science/netcdf to 4.6.3	2019-03-02 17:45:58 +00:00
netcdf-fortran	Update science/netcdf to 4.6.3	2019-03-02 17:45:58 +00:00
nifticlib
nwchem	science/nwchem: Update 6.8.1.20190314 -> 6.8.1.20190319	2019-03-19 23:18:35 +00:00
nwchem-data
octopus
openbabel
openkim
openmx
opensim-core
opsin
p5-Algorithm-SVMLight
p5-Chemistry-3DBuilder
p5-Chemistry-Bond-Find
p5-Chemistry-Canonicalize
p5-Chemistry-Elements
p5-Chemistry-File-MDLMol
p5-Chemistry-File-Mopac
p5-Chemistry-File-PDB
p5-Chemistry-File-SLN
p5-Chemistry-File-SMARTS
p5-Chemistry-File-SMILES
p5-Chemistry-File-VRML
p5-Chemistry-File-XYZ
p5-Chemistry-FormulaPattern
p5-Chemistry-InternalCoords
p5-Chemistry-Isotope
p5-Chemistry-MacroMol
p5-Chemistry-MidasPattern
p5-Chemistry-Mok
p5-Chemistry-Mol
p5-Chemistry-Pattern
p5-Chemistry-Reaction
p5-Chemistry-Ring
p5-Geo-BUFR
p5-Geo-Coordinates-Converter
p5-Geo-Coordinates-Converter-iArea
p5-Geo-ReadGRIB
p5-Geo-WebService-Elevation-USGS
p5-Mcstas-Tools	science/p5-Mcstas-Tools: Merge {do,post}-install	2019-02-27 13:15:02 +00:00
p5-PerlMol
p5-Physics-Unit
paje
paraview	Update devel/protobuf to 3.7.1	2019-03-31 13:41:02 +00:00
pcmsolver
PETSc
pnetcdf
psychopy
pulseview
py-abipy
py-asdf
py-ase
py-avogadrolibs
py-cdo
py-chempy
py-coards
py-DendroPy
py-dlib	Update science/dlib-cpp and science/py-dlib to 19.17.	2019-03-30 14:42:52 +00:00
py-geometer	Add py-geometer 0.1.2	2019-03-17 18:21:39 +00:00
py-gpaw
py-GPy
py-GPyOpt
py-gsd	science/py-gsd: Update 1.6.0 -> 1.6.1	2019-03-16 16:03:11 +00:00
py-h5py
py-hcluster
py-kinematics
py-lifelines	science/py-lifelines: update to 0.19.5	2019-02-27 22:12:09 +00:00
py-MDAnalysis
py-MDAnalysisTests
py-mdp
py-mlpy
py-mmtf-python
py-molmod
py-netCDF4	Update science/netcdf to 4.6.3	2019-03-02 17:45:58 +00:00
py-obspy	- Update to 1.1.1	2019-02-28 07:18:24 +00:00
py-oddt
py-OpenFermion
py-openpiv
py-paida
py-paramz
py-phono3py
py-phonopy
py-pupynere
py-pyaixi
py-pydicom
py-PyFR
py-pygeodesy
py-pymatgen
py-pymol
py-pyosf
py-PyQuante
py-pysal
py-pyteomics
py-pyteomics.biolccc
py-qcelemental	New port: science/py-qcelemental: Essentials for quantum chemistry	2019-03-31 08:12:37 +00:00
py-qcengine	New port: science/py-qcengine: Quantum chemistry program executor and IO standardizer (QCSchema)	2019-03-31 08:24:32 +00:00
py-qspin
py-quantities	science/py-quantities: Update 0.12.2 -> 0.12.3	2019-02-23 16:06:52 +00:00
py-rmf
py-rmsd
py-ScientificPython	Update science/netcdf to 4.6.3	2019-03-02 17:45:58 +00:00
py-scikit-fuzzy	science/py-scikit-fuzzy: Update 0.4.0 -> 0.4.1	2019-03-31 03:19:27 +00:00
py-scikit-learn
py-scikit-sparse
py-scimath
py-scipy
py-scoria
py-SimpleSpectral
py-spglib
py-veusz	Re-add science/py-veusz: the latest version builds with Qt5	2019-03-17 20:32:18 +00:00
py-ws2300
pybrain
pycdf	Update science/netcdf to 4.6.3	2019-03-02 17:45:58 +00:00
pynn	- Update to 0.9.4	2019-03-25 03:24:01 +00:00
qbox	science/qbox: Update 1.66.2 -> 1.66.3	2019-03-30 19:43:10 +00:00
qcl
qmcpack	science/qmcpack: Update 3.6.0 -> 3.7.0	2019-03-30 20:26:02 +00:00
quantum-espresso	Mark broken on armv*:	2019-03-29 23:06:42 +00:00
quantum-espresso-pseudopotentials
qwalk
R-cran-AMORE
R-cran-bayesm
R-cran-cmprsk
R-cran-DCluster
R-cran-e1071
R-cran-eco
R-cran-Epi
R-cran-epicalc
R-cran-etm
R-cran-fastICA
R-cran-kernlab
R-cran-snow
R-cran-som
R-cran-udunits2
rdkit	science/rdkit: Update 2018.09.2 -> 2018.09.3	2019-03-31 02:31:56 +00:00
rmf
rubygem-ai4r
rubygem-cdo
rubygem-rgeo	Update to 2.0.1	2019-03-09 12:09:33 +00:00
rubygem-rgeo-geojson
rubygem-rgeo-proj4
rubygem-rgeo-shapefile	Update to 2.0.0	2019-02-24 17:56:50 +00:00
rubygem-ruby-dcl
rubygem-ruby-netcdf	Update science/netcdf to 4.6.3	2019-03-02 17:45:58 +00:00
scidavis
siesta
sigrok-cli
sigrok-firmware
sigrok-firmware-fx2lafw
sigrok-firmware-utils
silo	science/silo: remove QT4 option (Qt4 deprecation)	2019-03-16 14:06:23 +00:00
simbody
simint
simlib
simsmith
sparta	science/sparta: Update 29Oct2018 -> 15Feb2019	2019-03-16 16:00:50 +00:00
spglib
step	math/libqalculate: Update to 3.0.0	2019-03-29 11:58:29 +00:00
svmlight
szip	Update to 2.1.1	2019-02-24 17:56:03 +00:00
teem
tfel
tinker	science/tinker: Update 8.5.3 -> 8.6.1	2019-03-16 15:50:33 +00:00
udunits
v_sim	Update science/netcdf to 4.6.3	2019-03-02 17:45:58 +00:00
vipster	science/vipster: Update 1.14.1a -> 1.15b	2019-02-24 19:42:02 +00:00
vmd	Update science/netcdf to 4.6.3	2019-03-02 17:45:58 +00:00
voro++
wannier90
wxmacmolplt	science/wxmacmolplt: Unbreak, it was crashing with WX-3.1	2019-03-03 08:06:44 +00:00
xcrysden
xdrawchem
xfce4-equake-plugin
xmakemol
yoda
Makefile	New port: science/py-qcengine: Quantum chemistry program executor and IO standardizer (QCSchema)	2019-03-31 08:24:32 +00:00