| .. |
|
adun
|
- fix PORTSCOUT
|
2009-07-06 07:29:12 +00:00 |
|
ariadne
|
|
|
|
artemis
|
|
|
|
avida
|
bump PORTREVISION after cmake update
|
2009-03-24 19:13:32 +00:00 |
|
babel
|
|
|
|
belvu
|
|
|
|
biococoa
|
|
|
|
biojava
|
- Update to 1.7
|
2009-05-01 09:33:42 +00:00 |
|
blast
|
|
|
|
blat
|
|
|
|
boinc-simap
|
|
|
|
chemeq
|
|
|
|
clustalw
|
|
|
|
consed
|
Welcome to the new linux ports infrastructure which allows using
|
2009-03-19 17:28:51 +00:00 |
|
crimap
|
|
|
|
crux
|
Update to Crux 1.1.0.
|
2009-06-21 06:18:51 +00:00 |
|
distribfold
|
|
|
|
dna-qc
|
|
|
|
dotter
|
|
|
|
embassy
|
- Update to 6.0.0
|
2009-06-16 22:42:34 +00:00 |
|
emboss
|
- Update to 0.1.24
|
2009-03-14 15:17:06 +00:00 |
|
fasta
|
|
|
|
fasta3
|
- Update to 35.4.7 [1]
|
2009-06-09 07:53:37 +00:00 |
|
fastdnaml
|
|
|
|
finchtv
|
|
|
|
fluctuate
|
|
|
|
garlic
|
|
|
|
genpak
|
|
|
|
gff2ps
|
|
|
|
gmap
|
|
|
|
gperiodic
|
|
|
|
grappa
|
|
|
|
hmmer
|
|
|
|
jalview
|
|
|
|
kinemage
|
|
|
|
L-Breeder
|
|
|
|
lagan
|
|
|
|
lamarc
|
- Mark most of my ports MAKE_JOBS_SAFE=yes
|
2009-05-16 06:27:56 +00:00 |
|
libgenome
|
|
|
|
libsbml
|
LibSBML is an open-source programming library to help you read, write,
|
2009-05-28 23:36:10 +00:00 |
|
linux-foldingathome
|
|
|
|
lsysexp
|
|
|
|
mafft
|
|
|
|
mapm3
|
|
|
|
migrate
|
|
|
|
molden
|
|
|
|
mopac
|
|
|
|
mrbayes
|
Fix LIB_DEPENDS on devel/readline: its sh lib version was bumped recently from
|
2009-05-12 11:28:17 +00:00 |
|
mummer
|
|
|
|
muscle
|
|
|
|
ncbi-toolkit
|
- Update to 2009.03.01
|
2009-03-28 16:59:39 +00:00 |
|
njplot
|
Convert most of remaining ports that depend on xorg-libraries to
|
2009-06-09 15:33:28 +00:00 |
|
ortep3
|
|
|
|
p5-AcePerl
|
- Flip MAKE_JOBS_SAFE to MAKE_JOBS_UNSAFE
|
2009-07-07 22:11:07 +00:00 |
|
p5-Bio-ASN1-EntrezGene
|
|
|
|
p5-Bio-Das
|
- lang/perl5.6 is dead, remove PERL_LEVEL/PERL_VERSION < 500801 checks
|
2009-07-22 16:27:08 +00:00 |
|
p5-Bio-Glite
|
Bio::Glite is an interface to G-language Genome Analysis Environment
|
2009-04-02 18:24:59 +00:00 |
|
p5-Bio-Graphics
|
- Update to 1.97
|
2009-07-05 22:24:00 +00:00 |
|
p5-Bio-MAGETAB
|
Utilize %%SITE_PERL%% and %%PERL_ARCH%% in pkg-plists
|
2009-07-30 23:04:49 +00:00 |
|
p5-Bio-Phylo
|
|
|
|
p5-bioperl
|
- lang/perl5.6 is dead, remove PERL_LEVEL/PERL_VERSION < 500801 checks
|
2009-07-22 16:27:08 +00:00 |
|
p5-bioperl-run
|
- Update to 1.6.1
|
2009-03-19 20:54:05 +00:00 |
|
paml
|
- Update to 4.2b
|
2009-03-02 19:02:48 +00:00 |
|
phd2fasta
|
|
|
|
phrap
|
|
|
|
phred
|
|
|
|
phylip
|
|
|
|
phyml
|
PhyML is a software that estimates maximum likelihood phylogenies from
|
2009-07-21 01:10:13 +00:00 |
|
platon
|
|
|
|
povchem
|
|
|
|
primer3
|
|
|
|
protomol
|
- update to jpeg7
|
2009-07-18 11:11:29 +00:00 |
|
psi88
|
|
|
|
py-biopython
|
|
|
|
pycogent
|
PyCogent is a software library for genomic biology. It is a fully integrated
|
2009-06-22 12:46:56 +00:00 |
|
pymol
|
- Update lang/python26 and make Python 2.6.2 to the default Python version
|
2009-06-08 22:30:55 +00:00 |
|
rasmol
|
Convert most of remaining ports that depend on xorg-libraries to
|
2009-06-09 15:33:28 +00:00 |
|
recombine
|
|
|
|
ruby-bio
|
|
|
|
seaview
|
|
|
|
seqio
|
|
|
|
sim4
|
|
|
|
ssaha
|
|
|
|
t_coffee
|
|
|
|
tinker
|
|
|
|
treepuzzle
|
|
|
|
treeviewx
|
|
|
|
tRNAscan-SE
|
|
|
|
wise
|
|
|
|
xdrawchem
|
|
|
|
xmolwt
|
|
|
|
Makefile
|
PhyML is a software that estimates maximum likelihood phylogenies from
|
2009-07-21 01:10:13 +00:00 |
