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freebsd-ports/biology
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James E. Housley a3686c5ead - New port: biology/fasta3, which comprises the FASTA3 suite of DNA and 
protein sequence search programs
- FASTA3 updates only some of the elements of FASTA2, which is why I have
  submitted ports of both versions (as biology/fasta and biology/fasta3)

PR:		24716
Submitted by:	Johann Visagie <johann@egenetics.com>
2001-02-11 16:28:59 +00:00
..
babel Massive style enforcement - use ^I instead of spaces for variables identation. 2001-01-16 17:33:20 +00:00
biojava Initial import of biology/biojava 2000-10-10 11:14:03 +00:00
chemeq Adding chemeq version 1.10. 2000-07-10 03:14:19 +00:00
clustalw - Support CC/CFLAGS/PREFIX properly 2000-10-03 01:10:19 +00:00
deft Missing " in post-patch target 2000-10-11 11:08:51 +00:00
emboss - Update EMBOSS (biology/emboss) from 1.9.0 to 1.9.1 2001-01-29 15:48:01 +00:00
fasta New port: biology/fasta, the FASTA2 suite of DNA and protein sequence 2001-02-11 16:24:18 +00:00
fasta3 - New port: biology/fasta3, which comprises the FASTA3 suite of DNA and 2001-02-11 16:28:59 +00:00
fastdnaml gmake is needed 2000-10-24 10:33:47 +00:00
gaussian98 add gaussian98, an ab-initio molecular orbital calculation program. 2001-02-10 19:38:20 +00:00
gperiodic Update to 1.2.6 2000-12-22 16:19:26 +00:00
hmmer update with the new PORTNAME/PORTVERSION variables 2000-04-08 22:04:57 +00:00
kinemage Update to version 5.79. 2000-12-11 03:10:04 +00:00
molden A file was added to distfile and then repackaged with the same name. 2000-10-13 10:59:34 +00:00
mopac fc is ftn77 now, adjust accordingly. 2000-06-11 19:51:59 +00:00
nab Initiail version of nab (4.2) 2000-10-10 02:57:23 +00:00
ncbi-toolkit Remove trailing period and package name from the pkg-comment. 2000-12-18 20:32:55 +00:00
ortep3 File missing in pkg-plist 2000-10-30 15:36:57 +00:00
p5-AcePerl - Update biology/p5-AcePerl from 1.62 to 1.67 2000-10-10 04:03:18 +00:00
p5-bioperl Update to version 0.6.2 2000-10-13 12:43:24 +00:00
paml Add paml version 3.01. 2000-07-10 03:21:05 +00:00
phylip Adding phylip version 3.5. 2000-07-10 03:25:48 +00:00
pkg As threatened, enforce the "Capital, no period" rule. Ellipses are 1999-06-26 17:19:19 +00:00
platon Fix MASTER_SITES 2000-08-01 23:31:19 +00:00
povchem Clean up inefficient perl invocations; use multiple REs in the same call. 2001-01-07 17:49:52 +00:00
psi88 update with the new PORTNAME/PORTVERSION variables 2000-04-08 22:04:57 +00:00
py-biopython Update to 0.90.d03 2000-09-11 14:56:36 +00:00
rasmol update with the new PORTNAME/PORTVERSION variables 2000-04-08 22:04:57 +00:00
seaview Change PKGDIR from pkg/ to . Also fix places where ${PKGDIR} is 2000-10-08 10:23:48 +00:00
sim4 Update biology/sim4 to 2000.10.19 2000-10-26 10:19:07 +00:00
tinker update from 3.7 to 3.8 2001-01-24 17:58:44 +00:00
xdrawchem Update to 0.84a. Generate the plist. 2001-02-08 19:57:19 +00:00
xmolwt Implement USE_GTK, part 1. 2000-10-05 06:36:23 +00:00
Makefile - New port: biology/fasta3, which comprises the FASTA3 suite of DNA and 2001-02-11 16:28:59 +00:00