freebsd-ports/biology
Greg Lewis 10d07fbd22 Unbreak this port:
. Fix dependencies to be in sync with the recent JDK ports renaming.
. Replace MASTER_SITES with a location that actually contains the
  source.
. Fix the packing list.

Note that there is a much newer version of this application available,
but that is beyond the scope of what I was trying to do (just fix the
JDK dependency), as is the last two items.
2002-06-16 01:08:49 +00:00
..
artemis
avida add avida 1.6.0 2002-04-20 15:17:46 +00:00
babel
biojava Unbreak this port: 2002-06-16 01:08:49 +00:00
chemeq upgrade to V110-1 2002-04-21 13:33:29 +00:00
clustalw - Add a new patch 2002-03-27 14:01:57 +00:00
coalesce
crimap Add crimap 2.4, a tool for the creation of multilocus linkage maps. 2002-03-27 14:42:56 +00:00
deft change master site 2002-03-29 08:15:13 +00:00
dna-qc
emboss BROKEN: incorrect checksums 2002-05-17 09:24:32 +00:00
fasta
fasta3
fastdnaml
fluctuate
gaussian98
genpak
gff2ps
gperiodic
grappa
hmmer
kinemage
lamarc
migrate
molden Note distribution term. 2002-05-27 06:25:53 +00:00
mopac
nab Remove #include <malloc.h> 2002-03-31 03:55:29 +00:00
ncbi-toolkit Correct MASTER_SITES. 2002-06-08 00:40:10 +00:00
nclever
ortep3
p5-AcePerl
p5-bioperl
p5-bioperl-devel
paml
phylip
pkg
platon
povchem
psi88
py-biopython
rasmol
recombine
ruby-bio Update to 0.3.6. 2002-04-10 18:37:18 +00:00
seaview BROKEN: Checksum is incorrect 2002-05-18 02:36:56 +00:00
seqio
sim4 Update to sim4-2002.03.03 to unbreak build. 2002-05-04 21:45:10 +00:00
spdbv Swiss-PdbViewer is an application that provides a user friendly interface 2002-04-02 16:18:53 +00:00
t_coffee
tinker
treeviewx Respect CFLAGS/CC. 2002-03-28 22:50:15 +00:00
tRNAscan-SE Add tRNAscan-SE 1.21, an improved tool for transfer RNA detection. 2002-03-27 14:18:49 +00:00
xdrawchem
xmolwt
Makefile add avida 1.6.0 2002-04-20 15:17:46 +00:00