8ede5f984e
PR: 227272 Submitted by: jwb Approved by: jrm (mentor) Differential Revision: https://reviews.freebsd.org/D15137
13 lines
670 B
Plaintext
13 lines
670 B
Plaintext
The bedtools utilities are a suite of tools for performing a wide range of
|
|
genomics analysis tasks. The most widely-used of these tools enable genome
|
|
arithmetic, i.e., set theory on the genome. For example, with bedtools one can
|
|
intersect, merge, count, complement, and shuffle genomic intervals from
|
|
multiple files in common genomic formats such as BAM, BED, GFF/GTF, and VCF.
|
|
|
|
Although each individual utility is designed to do a relatively simple task,
|
|
e.g., intersect two interval files, more sophisticated analyses can be
|
|
conducted by stringing together multiple bedtools operations on the command
|
|
line or in shell scripts.
|
|
|
|
WWW: http://bedtools.readthedocs.org/
|