Kurt Jaeger 97a21e2f53 biology/seqtools: 4.34.1 -> 4.35 ... - Blixem bug fix in sorting features, RT 473624 - Compilation of the seqtools in parallel, RT 467905 - Fix bug with sorting by similarity/identity to first sequence (RT:473624) - Fix an error compiling with multiple threads (RT:467905)		2015-07-07 14:17:51 +00:00
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ariadne
artemis
avida	Use BROKEN helpers	2015-06-27 14:29:25 +00:00
babel	Remove $FreeBSD$ from patches files in categories a-j.	2015-05-22 13:34:20 +00:00
bcftools	New port: biology/bcftools	2015-06-05 21:01:13 +00:00
biococoa	MASTER_SITES cleanup.	2015-05-14 10:15:04 +00:00
biojava
blat
chemeq
clustalw	MASTER_SITES cleanup.	2015-05-14 10:15:04 +00:00
consed
crux
emboss
fasta
fasta3	- Update to 36.3.7a	2015-05-07 02:33:57 +00:00
fastdnaml
fluctuate	Remove $FreeBSD$ from patches files in categories a-j.	2015-05-22 13:34:20 +00:00
garlic
gff2ps
gmap
gperiodic
grappa
hmmer
htslib	Update ports in the [bcd]* categories to not use GH_COMMIT.	2015-05-06 15:16:53 +00:00
iolib
jalview	Remove $FreeBSD$ from patches files in categories a-j.	2015-05-22 13:34:20 +00:00
lagan	- Fix shebangs	2015-06-11 10:17:24 +00:00
lamarc
libsbml	- Update to 5.11.4	2015-05-12 08:58:14 +00:00
linux-foldingathome
mafft	Use BROKEN helpers	2015-06-27 14:30:19 +00:00
mapm3
migrate	- Update options	2015-06-28 15:30:41 +00:00
molden
mopac
mrbayes
mummer
muscle
ncbi-blast+	- Unbreak	2015-05-04 06:08:59 +00:00
ncbi-toolkit
njplot
ortep3
p5-AcePerl	After r390893, chmod u+w/u-w for stripping perl XS modules is unnecessary,	2015-06-29 15:47:44 +00:00
p5-Bio-ASN1-EntrezGene	Start removing MASTER_SITE_SUBDIR=CPAN:username where possible. The	2015-06-24 15:16:23 +00:00
p5-Bio-Das
p5-Bio-Das-Lite
p5-Bio-GFF3
p5-Bio-Glite
p5-Bio-Graphics
p5-Bio-MAGETAB
p5-Bio-NEXUS	- Add NO_ARCH	2015-05-31 13:37:20 +00:00
p5-Bio-Phylo
p5-Bio-SCF
p5-bioperl	- Fix shebangs	2015-05-30 12:31:59 +00:00
p5-bioperl-run
paml
phrap
phred
phylip
phyml
platon
plink
plinkseq
povchem	Remove $FreeBSD$ from patches files in categories a-j.	2015-05-22 13:34:20 +00:00
primer3
protomol	- Add LICENSE	2015-06-25 09:32:18 +00:00
psi88	- Strip binaries	2015-06-03 17:27:08 +00:00
py-biopython
pycogent
pyfasta
python-nexus
recombine
ruby-bio
samtools	Update ports in the [bcd]* categories to not use GH_COMMIT.	2015-05-06 15:16:53 +00:00
seaview	biology/seaview: Update version 4.5.4=>4.5.4.4	2015-05-22 11:09:23 +00:00
seqan
seqio
seqtools	biology/seqtools: 4.34.1 -> 4.35	2015-07-07 14:17:51 +00:00
sim4
ssaha
t_coffee	MASTER_SITES cleanup.	2015-05-14 10:15:04 +00:00
tinker	Remove $FreeBSD$ from patches files in categories a-j.	2015-05-22 13:34:20 +00:00
treepuzzle
treeviewx
tRNAscan-SE
ugene	Update Unipro UGENE to version 1.16.2.	2015-05-28 08:11:59 +00:00
velvet
wise
xmolwt
Makefile	New port: biology/bcftools	2015-06-05 21:01:13 +00:00